BAC Information

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BAC

Clone NameB6Ng01-169G13
Chromosome7 (Build37)Y (Build37)
Map Location 75,877,356 - 75,878,3561,870,346 - 1,870,572
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneDmn, LOC665319, LOC100041771, Igf1r, C330024D12Rik, EG434197, LOC100041800, EG384639
Downstream geneArrdc4, LOC384741, EG665410
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-169G13.bB6Ng01-169G13.g
ACCDH960395DH960396
length998419
definitionDH960395|Mus musculus domesticus DNA, BAC clone: B6Ng01-169G13, 5' end.DH960396|Mus musculus domesticus DNA, BAC clone: B6Ng01-169G13, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(75,877,356 - 75,878,356)(1,870,346 - 1,870,572)
sequence
gaattctggtcgctatgaatttgtggagcacggtcatacttgatgaccca
ggacttggccctttcagtgtgcgataggagaaatcttaggcaagctagga
caagttagttcccttgggcaagaggagggcagggtgttaggcttttgtca
ggataaggagagataagccagccttgtaactatctagttcttgaggtata
aattttctatgcaaaacttgggagtaaactaaagcaaatgccaataaaca
gtatgcatgcacatacaccacagactgccccttcctagtgcacttcagaa
cactgggcacgcgctgacatcagatgcttctgactcgtgggtcttcttct
ctccggggttcctggttttgaggttgacgtactgggtctccattatttct
catggagaagggcttcactgagggtaagctcagtgcacatgtatgtcaca
atgccaaggagggcacagccaagaaacctcctcattcatttgcacatccg
ggaaaacaaggtctgttctagctctccaagagcatgcttgggtatagtca
aaggtttacagtctacagagctaatgtcacttgctggctaatgtccctag
attctgtgccattagctgtcccaggctgccaaaggaccaataggcttctt
gacttctatccatatttctcaccttgtgacttctctggtgtccaagttca
tcagaattaccccctttgtatatagacattgtttaaaactatcttcctat
cagagagtatgggggagggagtagtcattttcattttgtttcagggatga
cagtgtatgagctggatgttctaaagtaaggtttcaggttcagcgagatt
gattttctcgaaagcgtggtatgcatctgatgtaacgtgcagctctcaca
ggggaacagctgctggcactcacataagctatgtgggtcacgtaagttat
cttgtggcatcagggccaaggtgttttgtatatttgataagataaagg
tgagctgctgacatttttaacctctgagggaggctgggtacttaaaactg
tcctctgaggagaagtgcaagagaatcgccagctcatgcactatgcagac
cctccttcaacagagtttggacctagcaaacacagaagtggatgctcaca
gtcagctattggatggatcacagggctcccaatggaggagctagagaaag
tacccaaggagctaaagggatctgcaaccctataggtggaacaacattat
gaactaaccagtaccccggagctcttgactctagctgcatatgtatcaaa
agatggcctagtcggccatcactggaaagagaggcccattggacacgcaa
actgtatatgccccagtacaggggaacgccagggccaaaaaaaatgggaa
tgggtgggtagggaagtgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_75877356_75878356
seq2: B6Ng01-169G13.b_46_1043

seq1  GAATTCTGGTCGCTATGAATTTGTGGAGCACGGTCATACTTGATGACCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGGTCGCTATGAATTTGTGGAGCACGGTCATACTTGATGACCCA  50

seq1  GGACTTGGCCCTTTCAGTGTGCGATAGGAGAAATCTTAGGCAAGCTAGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTTGGCCCTTTCAGTGTGCGATAGGAGAAATCTTAGGCAAGCTAGGA  100

seq1  CAAGTTAGTTCCCTTGGGCAAGAGGAGGGCAGGGTGTTAGGCTTTTGTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTTAGTTCCCTTGGGCAAGAGGAGGGCAGGGTGTTAGGCTTTTGTCA  150

seq1  GGATAAGGAGAGATAAGCCAGCCTTGTAACTATCTAGTTCTTGAGGTATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATAAGGAGAGATAAGCCAGCCTTGTAACTATCTAGTTCTTGAGGTATA  200

seq1  AATTTTCTATGCAAAACTTGGGAGTAAACTAAAGCAAATGCCAATAAACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTCTATGCAAAACTTGGGAGTAAACTAAAGCAAATGCCAATAAACA  250

seq1  GTATGCATGCACATACACCACAGACTGCCCCTTCCTAGTGCACTTCAGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGCATGCACATACACCACAGACTGCCCCTTCCTAGTGCACTTCAGAA  300

seq1  CACTGGGCACGCGCTGACATCAGATGCTTCTGACTCGTGGGTCTTCTTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGGGCACGCGCTGACATCAGATGCTTCTGACTCGTGGGTCTTCTTCT  350

seq1  CTCCGGGGTTCCTGGTTTTGAGGTTGACGTACTGGGTCTCCATTATTTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCGGGGTTCCTGGTTTTGAGGTTGACGTACTGGGTCTCCATTATTTCT  400

seq1  CATGGAGAAGGGCTTCACTGAGGGTAAGCTCAGTGCACATGTATGTCACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGAGAAGGGCTTCACTGAGGGTAAGCTCAGTGCACATGTATGTCACA  450

seq1  ATGCCAAGGAGGGCACAGCCAAGAAACCTCCTCATTCATTTGCACATCCG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCAAGGAGGGCACAGCCAAGAAACCTCCTCATTCATTTGCACATCCG  500

seq1  GGAAAACAAGGTCTGTTCTAGCTCTCCAAGAGCATGCTTGGGTATAGTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAACAAGGTCTGTTCTAGCTCTCCAAGAGCATGCTTGGGTATAGTCA  550

seq1  AAGGTTTACAGTCTACAGAGCTAATGTCACTTGCTGGCTAATGTCCCTAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTTTACAGTCTACAGAGCTAATGTCACTTGCTGGCTAATGTCCCTAG  600

seq1  ATTCTGTGCCATTAGCTGTCCCAGGCTGCCAAAGGACCAATAGGCTTCTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTGTGCCATTAGCTGTCCCAGGCTGCCAAAGGACCAATAGGCTTCTT  650

seq1  GACTTCTATCCATATTTCTCACCTTGTGACTTCTCTGGTGTCCAAGTTCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTCTATCCATATTTCTCACCTTGTGACTTCTCTGGTGTCCAAGTTCA  700

seq1  TCAGAATTACCCCCTTTGTATATAGACATTGTTTAAAACTATCTTCCTAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAATTACCCCCTTTGTATATAGACATTGTTTAAAACTATCTTCCTAT  750

seq1  CAGAGAGTATGGGGGAGGGAGTAGTCATTTTCATTTTGTTTCAGGGATGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGAGTATGGGGGAGGGAGTAGTCATTTTCATTTTGTTTCAGGGATGA  800

seq1  CAGTGTATGAGCTGGATGTTCTAAAGTAAGGTTTCAGGTTCAGCGAGATT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGTATGAGCTGGATGTTCTAAAGTAAGGTTTCAGGTTCAGCGAGATT  850

seq1  GATTTTCTCGAAAGCGTGGTATGCATCTGATGTAACGTGCAGCTCTCACA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTTCTCGAAAGCGTGGTATGCATCTGATGTAACGTGCAGCTCTCACA  900

seq1  GGGGAACAGCTGCTGGCACTCACATAAGCTTATGGTGGGTCACGTAAGTT  950
      ||||||||||||||||||||||||||||| ||| ||||||||||||||||
seq2  GGGGAACAGCTGCTGGCACTCACATAAGC-TAT-GTGGGTCACGTAAGTT  948

seq1  ATCTTGTGGCATCAGGGCCAAGGTGTTTTGTTATATTAGATAAGATAAAG  1000
      |||||||||||||||||||||||||||||| |||||| ||||||||||||
seq2  ATCTTGTGGCATCAGGGCCAAGGTGTTTTG-TATATTTGATAAGATAAAG  997

seq1  G  1001
      |
seq2  G  998

seq1: chrY_1870346_1870572
seq2: B6Ng01-169G13.g_264_492

seq1  CTAGAGAAAGTACCCAAGGAGCTAAAGGGATCTGCAACCCTATAGGTGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAGAAAGTACCCAAGGAGCTAAAGGGATCTGCAACCCTATAGGTGGA  50

seq1  ACAACATTATGAACTAACCATTACCCCTGAGCTCTTGACTCTTGCTGCAT  100
      |||||||||||||||||||| |||||| |||||||||||||| |||||||
seq2  ACAACATTATGAACTAACCAGTACCCCGGAGCTCTTGACTCTAGCTGCAT  100

seq1  AGGTATCAAAAGATGGCCTAGTCGGCCATCACTGGAAAGAGAGGCCCATT  150
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTATCAAAAGATGGCCTAGTCGGCCATCACTGGAAAGAGAGGCCCATT  150

seq1  GGACATGCAAACTTTATATGCCCCAGTACAGGGGAACGCCAGGGCC--AA  198
      ||||| ||||||| ||||||||||||||||||||||||||||||||  ||
seq2  GGACACGCAAACTGTATATGCCCCAGTACAGGGGAACGCCAGGGCCAAAA  200

seq1  AAAGGGGCAGTGGGTGGGTAGGGGAGTGG  227
      |||  || | ||||||||||||| |||||
seq2  AAAATGGGAATGGGTGGGTAGGGAAGTGG  229