BAC Information

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BAC

Clone NameB6Ng01-206D01
ChromosomeY (Build37)
Map Location 2,450,357 - 2,451,206
singlet/doubletsinglet
Overlap geneLOC676356
Upstream geneUbe1y1-ps2, LOC667137, LOC100039373, LOC100039381, LOC667143, LOC100039401, LOC100039430, Vmn2r-ps137, LOC100039450, LOC547210, Ube1y1-ps1, Sry, LOC100042840, LOC100042849, LOC620228, LOC667181, Rbmy1a1, LOC667189, LOC100042874, LOC667194, LOC100042881, LOC667201, LOC100039546, Rhoay-ps2, LOC100039568, LOC100041505, LOC100039581
Downstream geneLOC667217, LOC100039613, LOC100041537, LOC667227, LOC667236, EG631479, LOC667244, LOC100039652
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-206D01.bB6Ng01-206D01.g
ACCGA025669GA025670
length1,0161,178
definitionB6Ng01-206D01.b B6Ng01-206D01.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaagtaagtttctaaaattatcaagggccacaagatgattcaaca
aaacagatcaatgtagtgaacaagtcggtaaaaaaataatctagatgaaa
gatgaaaacagttaagaaaatcatccaagaaacattaagctcctgggcaa
aaattggaaacctcagaacaggaaaagtcaacaaatcaaacatatgggta
aaagcatcaccactaaactaaatcattcagaaagaaaagaactgtcaaag
cctgaagatgggctgaggacactcacacagaaaaaataaacaagtattcc
tacaactttgggacacaatttcgatcagaatggtatctgagaatccatgt
aagagaattctcaacagaggaatccaaatggccatgaagcacttaaagca
atgttcaacatccttagtcatcagggaaatacaaatcaaaaccacgctga
gattccacctcacactactcagaatggccatgatcaaaaacttaggtggc
agcagatgctggctaggatgtggagaaagaggaacattcctccattgatg
gtgggattgcaagctggtacaaccactctgaaaaatcaatctgacatttc
ctcaaaaaattggaaatagatctacctcaagacccagctacaccacccct
gggcatatacccaaaagatgctccaccatttcacaaggacacatggtcca
ctatgttccctagcagtcttattcataatattgagaagctgcaaacaacc
cagttgtccctcagccaaagaatggatgcagaaaatgttcatgtccacca
tcgaatactacttggctgttaaaaatgatggtatcatgaattttgcaggc
aaaatcatggaattagaaaatctcatcctgaatgaggtaacccagaccca
aaagacatgcatggtatctactaactgataagtgggtattggcccagaag
ttcagaatttcccatgatacaactcacagactgggggaagcttacttaac
agaatgcagacccatt
gaattcttttgcagcttttgtctgggaagacagagcaacagccacaacct
tagtggctttatctgtcaaatcatttcctaaagacatagggccaggaagg
cccgaatgtgccctgacatgagtaatataaacaggggatcttctatttaa
taatacagattgtatttgttggaaaatattgacaaccctgctggaaggtt
ttattactccagctgtctcaagaaggttaactgcattaactacataagaa
gaatctgatacaatgttaagcgaccctggaaaagttttaagaacctccag
taccactagacattctacaatttgaggtgaggtttcattatattgttttg
atactaccttgttattaaccacataagcacctataccagtttttgatcca
tcagtatatactataattccatctttgagtgggtccttagctgttactta
tggaaacacaatagcctaattcggggcaaactgtaaaattggatgctttg
gataatggttatcaatctgtcctgaaaaggaggtgactaatactgcccaa
tcgttagatgtagctgccaaggtttgaacttgtgcagcagtataaggcac
aattaagaaattagggtctcgtccaaaatgagtaatggctgcttttatcc
ctcggagcgcaagctgcgcaactgcatcagggtaccaatctattattttt
gcaggagatgcacttggatgcacccataataagggtccattttgccacaa
aactgcggtcggcaactgggctgccttaaagatgcacaaatcaaaaggct
gtgactcatcaatgcgttgtaattgagctttttgcaagacattctctacc
ttttgtaaggcctgattagtggcagaagtaagggtcctagggggaggaga
ttatagatccccttccagaatatcaatacaggtttaattcagcccgagga
atcttaaagtggtctcagccataatattcccccaataatttttgaaaatc
attcaggtatgttaatgagatctttaatttttgagcattattctagtggg
agatatatgaactcagaattggtcccacttcgaaatgccttttcgattgc
attgaatccatgtgctaatctggatcgaactgatgacctgtaactgcata
cctgtgtgaaggaaggactcctcaacta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrY_2450357_2451206
seq2: B6Ng01-206D01.b_47_896

seq1  GAATTCAAGTAAGTTTCTAAAATTATCAAGGGCCACAAGATGATTCAACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGTAAGTTTCTAAAATTATCAAGGGCCACAAGATGATTCAACA  50

seq1  AAACAGATCAATGTAGTGAACAAGTCGGTAAAAAAATAATCTAGATGAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAGATCAATGTAGTGAACAAGTCGGTAAAAAAATAATCTAGATGAAA  100

seq1  GATGAAAACAGTTAAGAAAATCATCCAAGAAACATTAAGCTCCTGGGCAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGAAAACAGTTAAGAAAATCATCCAAGAAACATTAAGCTCCTGGGCAA  150

seq1  AAATTGGAAACCTCAGAACAGGAAAAGTCAACAAATCAAACATATGGGTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTGGAAACCTCAGAACAGGAAAAGTCAACAAATCAAACATATGGGTA  200

seq1  AAAGCATCACCACTAAACTAAATCATTCAGAAAGAAAAGAACTGTCAAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCATCACCACTAAACTAAATCATTCAGAAAGAAAAGAACTGTCAAAG  250

seq1  CCTGAAGATGGGCTGAGGACACTCACACAGAAAAAATAAACAAGTATTCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAAGATGGGCTGAGGACACTCACACAGAAAAAATAAACAAGTATTCC  300

seq1  TACAACTTTGGGACACAATTTCGATCAGAATGGTATCTGAGAATCCATGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAACTTTGGGACACAATTTCGATCAGAATGGTATCTGAGAATCCATGT  350

seq1  AAGAGAATTCTCAACAGAGGAATCCAAATGGCCATGAAGCACTTAAAGCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGAATTCTCAACAGAGGAATCCAAATGGCCATGAAGCACTTAAAGCA  400

seq1  ATGTTCAACATCCTTAGTCATCAGGGAAATACAAATCAAAACCACGCTGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTCAACATCCTTAGTCATCAGGGAAATACAAATCAAAACCACGCTGA  450

seq1  GATTCCACCTCACACTACTCAGAATGGCCATGATCAAAAACTTAGGTGGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCCACCTCACACTACTCAGAATGGCCATGATCAAAAACTTAGGTGGC  500

seq1  AGCAGATGCTGGCTAGGATGTGGAGAAAGAGGAACATTCCTCCATTGATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGATGCTGGCTAGGATGTGGAGAAAGAGGAACATTCCTCCATTGATG  550

seq1  GTGGGATTGCAAGCTGGTACAACCACTCTGAAAAATCAATCTGACATTTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGATTGCAAGCTGGTACAACCACTCTGAAAAATCAATCTGACATTTC  600

seq1  CTCAAAAAATTGGAAATAGATCTACCTCAAGACCCAGCTACACCACCCCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAAAAATTGGAAATAGATCTACCTCAAGACCCAGCTACACCACCCCT  650

seq1  GGGCATATACCCAAAAGATGCTCCACCATTTCACAAGGACACATGGTCCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCATATACCCAAAAGATGCTCCACCATTTCACAAGGACACATGGTCCA  700

seq1  CTATGTTCCCTAGCAGTCTTATTCATAATATTGAGAAGCTGCAAACAACC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGTTCCCTAGCAGTCTTATTCATAATATTGAGAAGCTGCAAACAACC  750

seq1  CAGTTGTCCCTCAGCCAAAGAATGGATGCAGAAAATGTTCATGTCCACCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTGTCCCTCAGCCAAAGAATGGATGCAGAAAATGTTCATGTCCACCA  800

seq1  TCGAATACTACTTGGCTGTTAAAAATGATGGTATCATGAATTTTGCAGGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGAATACTACTTGGCTGTTAAAAATGATGGTATCATGAATTTTGCAGGC  850