seq1: chrY_2073004_2073061
seq2: B6Ng01-231F16.b_229_270
seq1 CTCTCTCTCTTTCTCTCTCTCTCTCTGTCCTTCTGTGTGTCTATAAGTGA 50
|||||||||| |||||||||||||||| |||||||
seq2 CTCTCTCTCTCTCTCTCTCTCTCTCTG------TGTGTGT---------- 34
seq1 GTGTGTGT 58
||||||||
seq2 GTGTGTGT 42
| seq1: chr5_27361417_27362316
seq2: B6Ng01-231F16.g_67_967
seq1 GAATTCACTGTAAACCTAGGAGGCTGTCAACAATAGAAAACTTAATTTAA 50
||||||||||||||||||||||||||||||||||||||||||||||||||
seq2 GAATTCACTGTAAACCTAGGAGGCTGTCAACAATAGAAAACTTAATTTAA 50
seq1 ACACTGCAAACCAATCAGTGGGGGTTCTGGGCTACACGTCATGTAAGACT 100
||||||||||||| |||| |||||||||||||||||| || |||||||||
seq2 ACACTGCAAACCACTCAGGGGGGGTTCTGGGCTACACCTCCTGTAAGACT 100
seq1 ATCATTACTATCATCACTTGGCAGCTCAGTTTCCTAGCTTCTTGGTATGT 150
||||||||||||||||||||||| |||| ||||||| |||||||||||||
seq2 ATCATTACTATCATCACTTGGCAACTCATTTTCCTAACTTCTTGGTATGT 150
seq1 GCTTCCAGGGAGGTACATGACAGAAGAAAGTGTGAAGCAGTGGGTGTTGA 200
|||||||||||||||||||||| |||||||||||||||||||||||||||
seq2 GCTTCCAGGGAGGTACATGACATAAGAAAGTGTGAAGCAGTGGGTGTTGA 200
seq1 TTTTGCAGTTAACTAACCCACTCAGAGAGTAGTCAGGAACCTTAAGATCT 250
||||||| |||||||||||||||| |||||||||||||||||||||||||
seq2 TTTTGCACTTAACTAACCCACTCATAGAGTAGTCAGGAACCTTAAGATCT 250
seq1 AACGCTACCAACAGAGTAGCTTTAAAACTGCTAACTAAGAGGGCACACGA 300
|||||||||||||||||| |||||||||||||||||||||||||||||||
seq2 AACGCTACCAACAGAGTATCTTTAAAACTGCTAACTAAGAGGGCACACGA 300
seq1 AAGAACTGGAACAATACAGCTACCCACACCAAGCCGAGACTGCTTTTATT 350
||||||||||||||||| |||||| ||||||||||||||||||||||||
seq2 AAGAACTGGAACAATACGACTACCCTCACCAAGCCGAGACTGCTTTTATT 350
seq1 AATCTGCAGGACCTTGGTGAGACTGCTTTTATTAATCTGTAGGACCTTGG 400
|||||||| |||||||||||||||||||||||||||||||| ||||||||
seq2 AATCTGCACGACCTTGGTGAGACTGCTTTTATTAATCTGTACGACCTTGG 400
seq1 TTCAAAGTCAACCCCTGTTGGAGGCCCTGGATCTCTTAATGTTCTAGTTC 450
||||||||||||||||||||||||||||||||||||||||||||||||||
seq2 TTCAAAGTCAACCCCTGTTGGAGGCCCTGGATCTCTTAATGTTCTAGTTC 450
seq1 TCTGATGCATCCCCAGGTCATAGGAGAAGGTACATATTTTTTTTTTAAAT 500
|||||||||||||||||||||||||| | |||||||||||||||||||||
seq2 TCTGATGCATCCCCAGGTCATAGGAGTAAGTACATATTTTTTTTTTAAAT 500
seq1 CTTGAAATTAAATTGTAAATCTTTTTTTTCCCTCCAAAATGAATCAATAA 550
||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2 CTTGAAATTAAATTGAAAATCTTTTTTTTCCCTCCAAAATGAATCAATAA 550
seq1 TCTTTATCAGATTCTGAAAAATCACACTCTCTGAGAAGCCAATTTAGATG 600
||||||||| ||||||||||||||||||| ||||||||||||||||||||
seq2 TCTTTATCATATTCTGAAAAATCACACTCGCTGAGAAGCCAATTTAGATG 600
seq1 CAGCAGCTCAGGTCGCTCTCCAGGGTCCTGAGTTTATTTTCTCTTTTTCT 650
| || ||| |||||||||||||||||||||||||||||||||||||||
seq2 CCGCTACTCTCGTCGCTCTCCAGGGTCCTGAGTTTATTTTCTCTTTTTCT 650
seq1 CTGAGAGTTAGCTCTCCCCACATCCACATCCAGCTCCTTGGTTGTTTTTG 700
|||||||||||||||||||||||||||||||||||||||||||| || ||
seq2 CTGAGAGTTAGCTCTCCCCACATCCACATCCAGCTCCTTGGTTGATTCTG 700
seq1 TTTGCCTGTTTTTGTTTTGTTTTTCATTCTTTAATTAGTAAGAAGATAAT 750
||||||||||| | |||| | ||||||| |||||||||||| |||||
seq2 ATTGCCTGTTTTCGCTTTG-TAACCATTCTTGAATTAGTAAGAACATAAT 749
seq1 GCAATACAGGCTCAATTGTTTTAAATAATCTAAGAATATCCTCACAGTTG 800
|||||||| ||||| |||||||||||||||| | ||||||||| |||||
seq2 GCAATACACGCTCATTTGTTTTAAATAATCTCAAAATATCCTCTCAGTTT 799
seq1 AGACCTACTGCTAC-CCCAGTA-CCTCTAACCTCAAGCCAGTTCTGTATC 848
| ||| |||||||| ||||||| || |||||||||||| || ||||||||
seq2 ACACCGACTGCTACACCCAGTACCCCCTAACCTCAAGCAAGGTCTGTATC 849
seq1 TCACCCACC-AATGGCCCAGTGGATACAAAAAGACTGAAAATATTCAACT 897
|| ||||| |||| ||||||| |||| || ||||||| ||||| |||
seq2 TCTTCCACCAAATGTCCCAGTGAATAC-CAATGACTGAATATATTGGACT 898
seq1 GCC 900
|||
seq2 GCC 901
|