BAC Information

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BAC

Clone NameB6Ng01-250O02
ChromosomeY (Build37)
Map Location 1,803,773 - 1,803,869
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039278, EG667079, LOC667089, Rhoay-ps1, Zfy2, Ube1y1-ps2, LOC667137, LOC100039373, LOC100039381, LOC667143, LOC100039401, LOC100039430, Vmn2r-ps137
Downstream geneLOC100039450, LOC547210, Ube1y1-ps1, Sry, LOC100042840, LOC100042849, LOC620228, LOC667181, Rbmy1a1, LOC667189, LOC100042874, LOC667194, LOC100042881, LOC667201, LOC100039546, Rhoay-ps2, LOC100039568, LOC100041505, LOC100039581, LOC676356, LOC667217, LOC100039613, LOC100041537, LOC667227, LOC667236, EG631479, LOC667244, LOC100039652
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-250O02.b
ACCGA058302
length111
definitionB6Ng01-250O02.b
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
tcctccccccgccgcttctgggggcccgccttttttttcttttttttttt
tttttttttttttacccattttgcgggggggttttttttttttttttttt
ttttttttttt
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chrY_1803773_1803869
seq2: B6Ng01-250O02.b_34_111 (reverse)

seq1  AAAAACTTAAAAAAAAAAAAACTTGAAGCTTCAAAAAAA----TCAACAA  46
      |||||   |||||||||||||    ||     |||||||     |  |||
seq2  AAAAAAAAAAAAAAAAAAAAA----AA-----AAAAAAACCCCCCCGCAA  41

seq1  AAACCCTAAAAAAAAAACCCCTATAAAATTCTAAAAAAAAAAAAAGAAAA  96
      ||    |||||||||||               ||||||||||||||||||
seq2  AATGGGTAAAAAAAAAA--------------AAAAAAAAAAAAAAGAAAA  77

seq1  A  97
      |
seq2  A  78