BAC Information

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BAC

Clone NameB6Ng01-282O23
ChromosomeY (Build37)
Map Location 19,372 - 20,435
singlet/doubletsinglet
Overlap geneLOC100039202
Upstream genenone
Downstream geneZfy1, Ube1y1, Rhoay-ps3, Jarid1d, Eif2s3y, Tspy-ps, Uty, Ddx3y, LOC100042763, LOC385246, Usp9y
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-282O23.bB6Ng01-282O23.g
ACCGA082020GA082021
length1,115816
definitionB6Ng01-282O23.b B6Ng01-282O23.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctctgttgttgttgttgttgttgttctgtttcctcccaccaagg
tttctgagaactaggaggtcactgctgaaatggtctggggcatgtataca
gacactggacatacaggttctaaattctaactctcacacatacttgcctg
cttttttgaccaatattgcagtggaataaaactcccctgtagccagctgg
ttgttaagtctctgatgtaactagcatttacactcatcaaagttagtgca
tgagcacatgcatacctcaagattgagtatgttgccaactacaaaaccag
tgctaagaattttaccaaagcatatgaacagtccatatccagctttacaa
aatctcgctggtaggaattacttcaatgcacattttgcagatgaggaatc
tgaggacctgacaggtctcctcctacaaagttacagaacacattctaaaa
ccttttgcgcttctctgtctgctgtgcagactcagagacattttataacc
tcgaacaagaaacaggataaggtaattcagttggaactctctagtctatt
ccttcctgatcttcacctccttggcatggcctcaaaatactgacactatg
agcctaggagcaaacagaaacaaaacaaccaccccaaactccctgggccc
cgatggactagaagaacacaagcaggactaggctctgggtttagtttcca
gtgcagcattcattttgtccagctagaggacacacaggattatgtacttg
acaatacagacagaagccacactgaaaaacaaaggtgtttaacttaacac
tttgggtaagagtttaacacaccaaaaatgcactcaccattacaggtaat
ttagaaaatcagcagagacaacaatagctgatttgtgtagcaaaaagcac
catttatggatcattctcactgttcataccaactgatgttctctttaacg
cttctttttttttctttccattttttataggtatttagctcatttacatt
tcatgctaataccaaagtccccatacccacccacccccactaacctaccc
gccactctcttttttgcctggcagtcccagtttaggcataagttgctatg
tcaaaggcccactcc
gaattcctgggaggtcttcatatgcggctcttcagagaggcagactcgct
gatgatctctgccttgtagccctgggtgtagatttctgggggtggggaag
ggcttcagactgtggggtctgttgccctgggtgcagtagatatcctcgga
agactgtggggtcttcagagggcagaccagctaatgatctgccgtggtgg
gaagggggcattttcctctttaatagactaaatgttttaaaatatttctt
cattctaaattctttggtttcctttatgtttttgtactcactctcttcta
tttctaatttggtgtatttgggtcccccccccctttttttctttcttctg
tcagctgggcaaactatcaatcttgtttatcttctgaaaggactagactt
ttaaagtcatcatcgtcgtcgtagtcgtcgtcatcatcatcatcatcatc
atcatatctctttacttaatttactctacatccttctcactacctccctc
ccagtcacccattcctaaaatcattcccccttctccctcctcttgttctc
tgagagtaagaatgttccttgaaatgtccccttgcactggcacttcaagt
ctctgtgagactaggtacaaccctctgcccctgagcccaaacaaagcatc
tagaagaacatgtcccacatacaggcaacatcttttggaagagcctcagc
ttcatttgttcagaacccacatgaagaccaagctgcacatctgctacatg
tgtgcagggaagggttaggtccaatctttgtatgctcttctcattagatt
catactctgagaggtc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrY_19372_20435
seq2: B6Ng01-282O23.b_44_1158

seq1  GAATTCCTCTGTTGTTGTTGTTGTTGTTGTTCTGTTTCCTCCCACCAAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTCTGTTGTTGTTGTTGTTGTTGTTCTGTTTCCTCCCACCAAGG  50

seq1  TTTCTGAGAACTAGGAGGTCACTGCTGAAATGGTCTGGGGCATGTATACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGAGAACTAGGAGGTCACTGCTGAAATGGTCTGGGGCATGTATACA  100

seq1  GACACTGGACATACAGGTTCTAAATTCTAACTCTCACACATACTTGCCTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACTGGACATACAGGTTCTAAATTCTAACTCTCACACATACTTGCCTG  150

seq1  CTTTTTTGACCAATATTGCAGTGGAATAAAACTCCCCTGTAGCCAGCTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTTGACCAATATTGCAGTGGAATAAAACTCCCCTGTAGCCAGCTGG  200

seq1  TTGTTAAGTCTCTGATGTAACTAGCATTTACACTCATCAAAGTTAGTGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTAAGTCTCTGATGTAACTAGCATTTACACTCATCAAAGTTAGTGCA  250

seq1  TGAGCACATGCATACCTCAAGATTGAGTATGTTGCCAACTACAAAACCAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCACATGCATACCTCAAGATTGAGTATGTTGCCAACTACAAAACCAG  300

seq1  TGCTAAGAATTTTACCAAAGCATATGAACAGTCCATATCCAGCTTTACAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTAAGAATTTTACCAAAGCATATGAACAGTCCATATCCAGCTTTACAA  350

seq1  AATCTCGCTGGTAGGAATTACTTCAATGCACATTTTGCAGATGAGGAATC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTCGCTGGTAGGAATTACTTCAATGCACATTTTGCAGATGAGGAATC  400

seq1  TGAGGACCTGACAGGTCTCCTCCTACAAAGTTACAGAACACATTCTAAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGACCTGACAGGTCTCCTCCTACAAAGTTACAGAACACATTCTAAAA  450

seq1  CCTTTTGCGCTTCTCTGTCTGCTGTGCAGACTCAGAGACATTTTATAACC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTTGCGCTTCTCTGTCTGCTGTGCAGACTCAGAGACATTTTATAACC  500

seq1  TCGAACAAGAAACAGGATAAGGTAATTCAGTTGGAACTCTCTAGTCTATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGAACAAGAAACAGGATAAGGTAATTCAGTTGGAACTCTCTAGTCTATT  550

seq1  CCTTCCTGATCTTCACCTCCTTGGCATGGCCTCAAAATACTGACACTATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCCTGATCTTCACCTCCTTGGCATGGCCTCAAAATACTGACACTATG  600

seq1  AGCCTAGGAGCAAACAGAAACAAAACAACCACCCCAAACTCCCTGGGCCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTAGGAGCAAACAGAAACAAAACAACCACCCCAAACTCCCTGGGCCC  650

seq1  CGATGGACTAGAAGAACACAAGCAGGACTAGGCTCTGGGTTTAGTTTCCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGATGGACTAGAAGAACACAAGCAGGACTAGGCTCTGGGTTTAGTTTCCA  700

seq1  GTGCAGCATTCATTTTGTCCAGCTAGAGGACACACAGGATTATGTACTTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCAGCATTCATTTTGTCCAGCTAGAGGACACACAGGATTATGTACTTG  750

seq1  ACAATACAGACAGAAGCCACACTGAAAAAC-AAGGTGTTTAACTTAACAC  799
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  ACAATACAGACAGAAGCCACACTGAAAAACAAAGGTGTTTAACTTAACAC  800

seq1  TTTGGGTAAGAGTTTAACACACCAAAAATGCACTCACCATTACAGGTAAT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGGTAAGAGTTTAACACACCAAAAATGCACTCACCATTACAGGTAAT  850

seq1  TTAGAAAATCAGCAGAGACAACAATAGCTGATTTGTGTAGCAAAAAGCAC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAAAATCAGCAGAGACAACAATAGCTGATTTGTGTAGCAAAAAGCAC  900

seq1  CATTTATGGATCATTCTCACTGTTCATACCAACTGATGTTCTCTTTAACG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTATGGATCATTCTCACTGTTCATACCAACTGATGTTCTCTTTAACG  950

seq1  CTTTCTTTTTTTTTTCTTTCCATTTTTTATTAGGTATTTAGCTCATTTAC  999
      |||   ||||||||||||||||||||||| ||||||||||||||||||||
seq2  CTT--CTTTTTTTTTCTTTCCATTTTTTA-TAGGTATTTAGCTCATTTAC  997

seq1  ATTTCCAATGCT-ATACCAAAAGTCCCCCATACCCACCCACCCCCACTAC  1048
      |||||  ||||| ||||| ||||| |||||||||||||||||||||||| 
seq2  ATTTC--ATGCTAATACC-AAAGT-CCCCATACCCACCCACCCCCACTAA  1043

seq1  CCTACCCGCCCACTCC----------------------------------  1064
      |||||||| ||||| |                                  
seq2  CCTACCCG-CCACT-CTCTTTTTTGCCTGGCAGTCCCAGTTTAGGCATAA  1091

seq1  ------------------------  1064
                              
seq2  GTTGCTATGTCAAAGGCCCACTCC  1115