Query= MSMg01no130_e11.b1 MSMg01no130_e11.b1 CHROMAT_FILE:
MSMg01no130_e11.b1 PHD_FILE: MSMg01no130_e11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:44:00 2005
(248 letters)
>mm_chrY_1489285_1489933
Length = 649
Score = 217 bits (112), Expect = 6e-61
Identities = 175/196 (89%), Gaps = 3/196 (1%)
Strand = Plus / Plus
Query: 51 aaatgtgtttagaatcattaaattacacacttaaaaataaataaatcaatggattta-tt 109
||||||||||||||||||||||||||||||||| | ||||||||||||||||||||| ||
Sbjct: 251 aaatgtgtttagaatcattaaattacacacttacagataaataaatcaatggatttattt 310
Query: 110 tagtatataaataaaactccaataaaact-tctgaaaaggcttaaccaaatgtgatgctt 168
|||||| ||||| | ||| ||||||| || | ||||||||||| |||| |||| |||||
Sbjct: 311 tagtatgtaaattatacttcaataaagctgt-tgaaaaggcttggccaactgtggtgctt 369
Query: 169 ctcatgtgagttgttatttgtcatagcacctgtgatttacctgttaatagtagtgggttt 228
|||||||||||||||||||||||| || |||||||| || |||||||||||||||| |||
Sbjct: 370 ctcatgtgagttgttatttgtcatggctcctgtgatgtagctgttaatagtagtggattt 429
Query: 229 tattacttatgaatca 244
|||||| ||||||||
Sbjct: 430 tattacagatgaatca 445
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 4
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 248
Length of database: 649
Length adjustment: 9
Effective length of query: 239
Effective length of database: 640
Effective search space: 152960
Effective search space used: 152960
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no130_e11.g1 MSMg01no130_e11.g1 CHROMAT_FILE:
MSMg01no130_e11.g1 PHD_FILE: MSMg01no130_e11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:44:00 2005
(156 letters)
>mm_chrY_1642209_1642764
Length = 556
Score = 159 bits (82), Expect = 9e-44
Identities = 131/150 (87%), Gaps = 8/150 (5%)
Strand = Plus / Minus
Query: 2 cctttgcttttctcttgtttctccaattacttcagcaagattttgc---tccgccttttg 58
|||||||||||||||||||||||||||||||||| ||||||| ||| ||| |||||
Sbjct: 347 cctttgcttttctcttgtttctccaattacttcaccaagattctgcatttcc---ttttg 291
Query: 59 ttttggaagattctcaaggaatcctaaatccagactttagggaagttatttaaaattctt 118
|||||||||||||||| |||| |||||||||||||||||| || ||||||||||||||
Sbjct: 290 ttttggaagattctcacctaatcttaaatccagactttagggcaggtatttaaaattctt 231
Query: 119 actggtggttctgacaatg-gtttcctctt 147
||| ||||| |||||||| ||| ||||||
Sbjct: 230 gctgttggttttgacaatgagtt-cctctt 202
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 4
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 156
Length of database: 556
Length adjustment: 8
Effective length of query: 148
Effective length of database: 548
Effective search space: 81104
Effective search space used: 81104
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
