Query= MSMg01no176_e15.b1 MSMg01no176_e15.b1 CHROMAT_FILE:
MSMg01no176_e15.b1 PHD_FILE: MSMg01no176_e15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:47:51 2005
(699 letters)
>mm_chrY_1386351_1387449
Length = 1099
Score = 1321 bits (683), Expect = 0.0
Identities = 695/699 (99%)
Strand = Plus / Minus
Query: 1 gttgagaaaagccagttctcgcctccaggctttgcagcctctttgttctctggaattctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 899 gttgagaaaagccagttctcgcctccaggctttgcagcctctttgttctctggaattctg 840
Query: 61 tgacataacaagggaagatttgtaaattctttcttggtagttctttggacttctgcaggt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 839 tgacataacaagggaagatttgtaaattctttcttggtagttctttggacttctgcaggt 780
Query: 121 tactcttctggtcctaataatctatgtgattagcaacctttcctttgcaattttattact 180
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 779 tactcttctggtcctaagaatctatgtgattagcaacctttcctttgcaattttattact 720
Query: 181 cactgccccccatatagctttcatttagcttcatggtctgagttcaatttaagagggact 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 719 cactgccccccatatagctttcatttagcttcatggtctgagttcaatttaagagggact 660
Query: 241 gtaactagagccagctttccttacagagcttccctatcttatcaaatttatctagaaggc 300
|||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||
Sbjct: 659 gtaactagagccagctttccttacagagcttccctaacttagcaaatttatctagaaggc 600
Query: 301 ttgacaatcttatcttcaccatttacagtgaagtctaagctgaacagttttaacattctc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 599 ttgacaatcttatcttcaccatttacagtgaagtctaagctgaacagttttaacattctc 540
Query: 361 tccatatctttgagacttaatactttcattgtcctttttagcccatactaactccatttt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 539 tccatatctttgagacttaatactttcattgtcctttttagcccatactaactccatttt 480
Query: 421 tgtcatagtttctcaacaattttgtgtcatttattacatgttatttattatgtataatcc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 tgtcatagtttctcaacaattttgtgtcatttattacatgttatttattatgtataatcc 420
Query: 481 aggaggcttatctacaaagctttttcaaatctgtttcagttttttatttctactaatgta 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 aggaggcttatctacaaagctttttcaaatctgtttcagttttttatttctactaatgta 360
Query: 541 gttgaaagatagtgttcttaactttctcataaataccatggtttattgaggtatctccat 600
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 359 gttgaaagatagtgttcttaattttctcataaataccatggtttattgaggtatctccat 300
Query: 601 ataacattagcttcattaaagagactgactgagctttttatgtttttgaagtttcaggag 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 ataacattagcttcattaaagagactgactgagctttttatgtttttgaagtttcaggag 240
Query: 661 aaattctttataatcacattctggttttgctcaaaacaa 699
|||||||||||||||||||||||||||||||||||||||
Sbjct: 239 aaattctttataatcacattctggttttgctcaaaacaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 699
Length of database: 1099
Length adjustment: 10
Effective length of query: 689
Effective length of database: 1089
Effective search space: 750321
Effective search space used: 750321
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no176_e15.g1 MSMg01no176_e15.g1 CHROMAT_FILE:
MSMg01no176_e15.g1 PHD_FILE: MSMg01no176_e15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:47:51 2005
(640 letters)
>mm_chrY_1224498_1225537
Length = 1040
Score = 1210 bits (626), Expect = 0.0
Identities = 638/644 (99%), Gaps = 4/644 (0%)
Strand = Plus / Plus
Query: 1 ttttccttcctagaaagaagagacaaagagagagagagagagagagagagagagagagag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 197 ttttccttcctagaaagaagagacaaagagagagagagagagagagagagagagagagag 256
Query: 61 agagagagagagagagagagagagag----gaaacacaggcttttgttattgcaaacact 116
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 257 agagagagagagagagagagagagagagaggaaacacaggcttttgttattgcaaacact 316
Query: 117 gatttttaaaaacacatttaaatgacttgataactttcataattatttagtttcaaataa 176
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 gatttttaaaaacacatttaaatgacttgataactttcataattatttagtttcaaataa 376
Query: 177 aagaaacttgcaaaatttgcatgttagactgcttaaatgggagagagtgtcatgactgca 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 aagaaacttgcaaaatttgcatgttagactgcttaaatgggagagagtgtcatgactgca 436
Query: 237 tttctgttatgcacacaaatactcagaggagaaatgaaggaggggagattattctggaaa 296
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 437 tttctgttatgcacacaaatactcagaggagaaatgaaggaggggagaaaattctggaaa 496
Query: 297 ctgttaggattatagttcagcaccaagacctgtgcgagtagaaagcccctgtccaagcta 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 ctgttaggattatagttcagcaccaagacctgtgcgagtagaaagcccctgtccaagcta 556
Query: 357 caaggaacactaaagcggccaatctcctattagggatagttagctgatcttacagtgcca 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 caaggaacactaaagcggccaatctcctattagggatagttagctgatcttacagtgcca 616
Query: 417 agtgggtcattttattgattgctcatcctttttgttttgtcttaataaatacctttatta 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 agtgggtcattttattgattgctcatcctttttgttttgtcttaataaatacctttatta 676
Query: 477 ttattttccaatgttcatgttttacttggaaatttaaaggatgcaagatttgctttatag 536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 ttattttccaatgttcatgttttacttggaaatttaaaggatgcaagatttgctttatag 736
Query: 537 aaattatttatatacatatactttgaagcagattatacatttatacatatataaaattaa 596
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 737 aaattatttatatacatatactttgaagcagattatacatttatacatatataaaattaa 796
Query: 597 aaactaagccattattagagtgataatttctataaatattaaat 640
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 797 aaactaagccattattagagtgataatttctataaatattaaat 840
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 110
Number of extensions: 35
Number of successful extensions: 35
Number of sequences better than 10.0: 1
Number of HSP's gapped: 29
Number of HSP's successfully gapped: 1
Length of query: 640
Length of database: 1040
Length adjustment: 10
Effective length of query: 630
Effective length of database: 1030
Effective search space: 648900
Effective search space used: 648900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
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