Query= MSMg01no305_f22.b1 MSMg01no305_f22.b1 CHROMAT_FILE:
MSMg01no305_f22.b1 PHD_FILE: MSMg01no305_f22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:45:13 2005
(416 letters)
>mm_chrY_667617_668432
Length = 816
Score = 804 bits (416), Expect = 0.0
Identities = 416/416 (100%)
Strand = Plus / Minus
Query: 1 tcatcatgctagaatttcaacactttcaaaagtttttttaataaagatgattatgatcca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 tcatcatgctagaatttcaacactttcaaaagtttttttaataaagatgattatgatcca 557
Query: 61 tcataatacttaaagtttttaatatcactaaatataccatcatattctccccctctctat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 tcataatacttaaagtttttaatatcactaaatataccatcatattctccccctctctat 497
Query: 121 cccccctctttgtctttcacacacacacacacaatgtgagttttaagaagcttagtttgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 cccccctctttgtctttcacacacacacacacaatgtgagttttaagaagcttagtttgg 437
Query: 181 ggtccatttgctacagtttgctaccatatcttttgggtctcttaacatcaggttaacatc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 ggtccatttgctacagtttgctaccatatcttttgggtctcttaacatcaggttaacatc 377
Query: 241 gtttttgataaattgtttcattgggtttggctttattgtgttgtttttaattcggaaatg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 gtttttgataaattgtttcattgggtttggctttattgtgttgtttttaattcggaaatg 317
Query: 301 attatttatttttgtttttctaatgataaaccaataagtttacccttgatatttccctca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 attatttatttttgtttttctaatgataaaccaataagtttacccttgatatttccctca 257
Query: 361 gtatttatgttcaagttatagtccagcttttaccctttttaggaaagggactttaa 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 gtatttatgttcaagttatagtccagcttttaccctttttaggaaagggactttaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 416
Length of database: 816
Length adjustment: 9
Effective length of query: 407
Effective length of database: 807
Effective search space: 328449
Effective search space used: 328449
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no305_f22.g1 MSMg01no305_f22.g1 CHROMAT_FILE:
MSMg01no305_f22.g1 PHD_FILE: MSMg01no305_f22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:45:13 2005
(377 letters)
>mm_chrY_636957_637733
Length = 777
Score = 727 bits (376), Expect = 0.0
Identities = 376/376 (100%)
Strand = Plus / Plus
Query: 1 ccacatgaaaatttcagatgcttcatgaaatggatacacatatataaagactttagatga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ccacatgaaaatttcagatgcttcatgaaatggatacacatatataaagactttagatga 260
Query: 61 agttacactatgtgagtatatgtctcctttagacactgtaagttgctgcccactgtacaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agttacactatgtgagtatatgtctcctttagacactgtaagttgctgcccactgtacaa 320
Query: 121 cagtgataatatattatagggttatcgaaccattttctgattcgatttaagtcccagttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cagtgataatatattatagggttatcgaaccattttctgattcgatttaagtcccagttt 380
Query: 181 acaagaaagtttcattcctgctacttctaatgggaacaagaacctgtggctgattacagg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 acaagaaagtttcattcctgctacttctaatgggaacaagaacctgtggctgattacagg 440
Query: 241 tcccaaggaagaatctttaagtagtgtaggtctcaaagttcaccagagaaactctttctg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tcccaaggaagaatctttaagtagtgtaggtctcaaagttcaccagagaaactctttctg 500
Query: 301 ccctctctttactttccctgacttgtcttgccattctgttttcttttccttagcaaactg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ccctctctttactttccctgacttgtcttgccattctgttttcttttccttagcaaactg 560
Query: 361 ttataaaagtgactca 376
||||||||||||||||
Sbjct: 561 ttataaaagtgactca 576
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 377
Length of database: 777
Length adjustment: 9
Effective length of query: 368
Effective length of database: 768
Effective search space: 282624
Effective search space used: 282624
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
