Query= MSMg01no322_o08.b1 MSMg01no322_o08.b1 CHROMAT_FILE:
MSMg01no322_o08.b1 PHD_FILE: MSMg01no322_o08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:05:57 2005
(581 letters)
>mm_chrX_53496146_53497125
Length = 980
Score = 364 bits (188), Expect = e-104
Identities = 295/332 (88%), Gaps = 10/332 (3%)
Strand = Plus / Minus
Query: 31 cagttctaattccaccacagttaatgcaatagccaacatttggccttaattattacagat 90
|||| ||||||| ||||||||||||||||||||||| |||||||||| ||||||||||||
Sbjct: 474 cagtcctaattctaccacagttaatgcaatagccaaaatttggcctttattattacagat 415
Query: 91 tga-ttatttttgcttgtttattgtgtataagaataactcagtgaaattctacc-tttct 148
| | |||| ||||||||||||||||||||||||||||||||||||||||| ||| |||||
Sbjct: 414 t-atttatatttgcttgtttattgtgtataagaataactcagtgaaattc-accctttct 357
Query: 149 cccatatggattcagtccttgaaatccagatgccagggagcaaaaaaagaaatttgactt 208
||||| ||||||||| ||||||||||||| || |||| || ||| | |||| ||||||
Sbjct: 356 cccatgtggattcaggccttgaaatccaggtggcaggcagggaaacaggaaaattgactg 297
Query: 209 gctgagccttcttgccagctctgattttgccaactttaatgcttata--gcagaaacatg 266
||| |||||||||||||||||||||||||||| ||||||||| ||| ||||| | |||
Sbjct: 296 gctcagccttcttgccagctctgattttgccatctttaatgc--atactgcagaca-atg 240
Query: 267 gcctaaagt-caaaatatttgtatttatttattcaaattcatttgtttatttaatatatt 325
||||||||| |||| |||||||||||||||||||||||||||||||||||||||| | ||
Sbjct: 239 gcctaaagttcaaattatttgtatttatttattcaaattcatttgtttatttaatgtgtt 180
Query: 326 cctgcgcgcctattctcatgccacagtacaca 357
|| | || ||||||||||||||||||||||
Sbjct: 179 tgtgtgtgcatattctcatgccacagtacaca 148
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 581
Length of database: 980
Length adjustment: 10
Effective length of query: 571
Effective length of database: 970
Effective search space: 553870
Effective search space used: 553870
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no322_o08.g1 MSMg01no322_o08.g1 CHROMAT_FILE:
MSMg01no322_o08.g1 PHD_FILE: MSMg01no322_o08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:05:57 2005
(641 letters)
>mm_chrY_1655631_1656666
Length = 1036
Score = 534 bits (276), Expect = e-156
Identities = 531/622 (85%), Gaps = 26/622 (4%)
Strand = Plus / Plus
Query: 1 aaaacaaacaaaatctcttcaatctgtctcaccaatcatacattaggtccaatg-cttgg 59
|||||||||||||| ||||||| ||||||| |||| || |||||||||||||| | |
Sbjct: 201 aaaacaaacaaaatgtcttcaaagtgtctcagcaattatgcattaggtccaatgtc-tca 259
Query: 60 gtgctttctgtttcaggctcacaatgatcaatggtatatacttt-ctaggttgtataact 118
||||| || | ||||||||||| ||| |||||| |||| ||| ||| ||||||||||
Sbjct: 260 gtgctctcagcttcaggctcac---gattaatggtttata-tttgctaccttgtataact 315
Query: 119 gcacttca-tttctctaccaggaacctttcctcagattctgtcctcatcaagaatcccat 177
||||| || ||| |||||| |||| ||| |||||||| ||||||||| |||| || |||
Sbjct: 316 gcactacagttt-tctacctggaaacttgcctcagatcctgtcctcagcaaggat--cat 372
Query: 178 -ctaataccatcagacacttctatgc-atcagagggaacaaggtctagctgtgtgccttg 235
| || ||||||||| | |||||||| | |||||||||||| ||||||||||||||| ||
Sbjct: 373 gc-aacaccatcagaaaattctatgcta-cagagggaacaaagtctagctgtgtgccatg 430
Query: 236 caggttgggtagagcactgtcaatatcccttctcctccagcaaaccctctcaag-gctca 294
||| |||| |||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 431 cagtttggttagagcactgtcaatatcccttctcctccagcaaaccctctcaaatgctca 490
Query: 295 caacgcctgtcttccaggataaaatctgattgcctaagagaaggagcaaatcatctctgc 354
||| | ||||||||| || ||| ||||| ||||||| |||||||||||| |||||| |
Sbjct: 491 caaagtttgtcttccaagacaaa-tctgagtgcctaaaagaaggagcaaagcatctccac 549
Query: 355 ttgctctaatgtctaaatgacattgcagattaagaaaaaacctag-agcttccccaagat 413
|||||| ||| |||||||| |||||||||||||||||| ||||| || |||||||||||
Sbjct: 550 ttgctccaatatctaaatgccattgcagattaagaaaatccctagcag-ttccccaagat 608
Query: 414 tctcagtccgggagcatttggacaatccattactttcatagggtccaaaattgtttgaat 473
||||||||| ||||||||||| ||||| ||||||||||||||||||||| ||||||||||
Sbjct: 609 tctcagtccaggagcatttgggcaatctattactttcatagggtccaaacttgtttgaat 668
Query: 474 tctacagaccaatgaattgtcccattagaagccacctttccagcaggtagcagcagctcc 533
||| |||||||||| ||||| ||||||||||||| || ||||||||||||||| |||||
Sbjct: 669 tctgcagaccaatgcattgttccattagaagccaactcaccagcaggtagcagctgctcc 728
Query: 534 aactgttgtctccaaaggcagttaaacaaaagcaacctgaagaggcaggtgaactgctcc 593
||||| ||||||||| |||| |||||||||||| ||||||||||| || |
Sbjct: 729 aactgctgtctccaatggcacctaaacaaaagca-------gaggcaggtgatcttataa 781
Query: 594 tggtcccaccaaggtgactttg 615
||||||||||||||||||||||
Sbjct: 782 tggtcccaccaaggtgactttg 803
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 641
Length of database: 1036
Length adjustment: 10
Effective length of query: 631
Effective length of database: 1026
Effective search space: 647406
Effective search space used: 647406
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
