MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-003M21
Chromosome	3 (Build37)
Map Location	8,347,835 - 8,469,779
singlet/doublet	doublet
Overlap gene	LOC620966
Upstream gene	Pkia, LOC667807, 3110050N22Rik, Il7, LOC620822, LOC633072, LOC545500
Downstream gene	Stmn2, Hey1, LOC100039504, Mrps28, Tpd52, LOC100041389, LOC667886, Zbtb10, Zfp704
Link	Open Mouse BAC browser

Click to get alignment info.

name	Pkia (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18767 MGI:104747
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC667807 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667807
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 6 Proteins pseudo : _no_value

name	3110050N22Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67306 MGI:1914556
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Il7 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16196 MGI:96561
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC620822 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:620822
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 11 Proteins pseudo : _no_value

name	LOC633072 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:633072
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 Proteins pseudo : _no_value

name	LOC545500 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:545500
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 156 ESTs, 5 Proteins pseudo : _no_value

name	LOC620966 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:620966
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 mRNAs, 42 ESTs, 5 Proteins pseudo : _no_value

name	Stmn2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20257 MGI:98241
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Hey1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:15213 MGI:1341800
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039504 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039504
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs

name	Mrps28 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66230 MGI:1913480
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tpd52 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:21985 MGI:107749
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 5 mRNAs

name	LOC100041389 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041389
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	LOC667886 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667886
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 112 ESTs, 2 Proteins pseudo : _no_value

name	Zbtb10 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:229055 MGI:2139883
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 119 ESTs, 1 Protein

name	Zfp704 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:170753 MGI:2180715
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pkia (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:113865954 GeneID:18767 MGI:104747
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : protein kinase inhibitor, alpha transcript_id : NM_008862.3

name	3110050N22Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:119637813 GeneID:67306 MGI:1914556
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 3110050N22 gene transcript_id : NM_173181.3

name	Il7 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142372734 GeneID:16196 MGI:96561
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : interleukin 7 transcript_id : NM_008371.3

name	Stmn2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130361 GeneID:20257 MGI:98241
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : stathmin-like 2 transcript_id : NM_025285.2

name	Hey1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:117606331 GeneID:15213 MGI:1341800
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : hairy/enhancer-of-split related with YRPW motif 1 transcript_id : NM_010423.2

name	LOC100039504 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149250594 GeneID:100039504
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs product : hypothetical protein LOC100039504 transcript_id : XM_001473019.1

name	Mrps28 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31981287 GeneID:66230 MGI:1913480
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : mitochondrial ribosomal protein S28 transcript_id : NM_025434.2

name	Tpd52 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:70608203 GeneID:21985 MGI:107749
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : tumor protein D52 transcript_id : NM_009412.2

name	Tpd52 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:70608213 GeneID:21985 MGI:107749
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : tumor protein D52 transcript_id : NM_001025263.1

name	Tpd52 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:70608204 GeneID:21985 MGI:107749
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : tumor protein D52 transcript_id : NM_001025264.1

name	Tpd52 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:70608197 GeneID:21985 MGI:107749
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : tumor protein D52 transcript_id : NM_001025262.1

name	Tpd52 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:70608193 GeneID:21985 MGI:107749
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : tumor protein D52 transcript_id : NM_001025261.1

name	LOC100041389 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149250619 GeneID:100041389
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100041389 transcript_id : XM_001476491.1

name	Zbtb10 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149250597 GeneID:229055 MGI:2139883
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 119 ESTs, 1 Protein product : zinc finger and BTB domain containing 10, transcript variant 1 transcript_id : XM_485202.5

name	Zfp704 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:18875369 GeneID:170753 MGI:2180715
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : zinc finger protein 704 transcript_id : NM_133218.1

name	Pkia (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6679359 GeneID:18767 MGI:104747
definition	GO_function : GO:0016301 - kinase activity [Evidence IEA] codon_start : 1 product : protein kinase inhibitor, alpha protein_id : NP_032888.1

name	3110050N22Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27502351 CCDS:CCDS17230.1 GeneID:67306 MGI:1914556
definition	codon_start : 1 product : hypothetical protein LOC67306 protein_id : NP_775273.1

name	Il7 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6680433 GeneID:16196 MGI:96561
definition	GO_component : GO:0005576 - extracellular region [Evidence IEA] [Evidence ISS]; GO:0005615 - extracellular space [Evidence IEA] GO_function : GO:0005125 - cytokine activity [Evidence IDA]; GO:0008083 - growth factor activity [Evidence IDA]; GO:0005126 - hematopoietin/interferon-class (D200-domain) cytokine receptor binding [Evidence IEA]; GO:0005139 - interleukin-7 receptor binding [Evidence IEA] [Evidence ISS] GO_process : GO:0045453 - bone resorption [Evidence IDA]; GO:0007267 - cell-cell signaling [Evidence ISS]; GO:0006955 - immune response [Evidence IEA]; GO:0043066 - negative regulation of apoptosis [Evidence IDA]; GO:0030890 - positive regulation of B cell proliferation [Evidence IDA]; GO:0008284 - positive regulation of cell proliferation [Evidence ISS]; GO:0045582 - positive regulation of T cell differentiation [Evidence IDA] codon_start : 1 product : interleukin 7 protein_id : NP_032397.1

name	Stmn2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13384630 CCDS:CCDS17231.1 GeneID:20257 MGI:98241
definition	GO_component : GO:0030426 - growth cone [Evidence IDA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0007242 - intracellular signaling cascade [Evidence IEA] codon_start : 1 note : superiorcervical ganglia, neural specific 10 product : stathmin-like 2 protein_id : NP_079561.1

name	Hey1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:117606332 CCDS:CCDS17232.1 GeneID:15213 MGI:1341800
definition	GO_component : GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0003700 - transcription factor activity [Evidence ISS]; GO:0030528 - transcription regulator activity [Evidence IEA] GO_process : GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA]; GO:0001570 - vasculogenesis [Evidence IGI] codon_start : 1 note : Hairy/E(spl)-related with YRPW motif 1 product : hairy/enhancer-of-split related with YRPW motif 1 protein_id : NP_034553.2

name	LOC100039504 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149250595 GeneID:100039504
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001473069.1

name	Mrps28 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31981288 CCDS:CCDS17233.1 GeneID:66230 MGI:1913480
definition	GO_component : GO:0005739 - mitochondrion [Evidence IEA]; GO:0030529 - ribonucleoprotein complex [Evidence IEA] GO_function : GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA] codon_start : 1 exception : mismatches in translation product : mitochondrial ribosomal protein S28 protein_id : NP_079710.2

name	Tpd52 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6678407 GeneID:21985 MGI:107749
definition	GO_component : GO:0005737 - cytoplasm [Evidence ISS]; GO:0005783 - endoplasmic reticulum [Evidence ISS]; GO:0048471 - perinuclear region [Evidence ISS] GO_function : GO:0005509 - calcium ion binding [Evidence ISS]; GO:0046982 - protein heterodimerization activity [Evidence IDA]; GO:0042803 - protein homodimerization activity [Evidence IDA] GO_process : GO:0030183 - B cell differentiation [Evidence ISS]; GO:0046903 - secretion [Evidence ISS] codon_start : 1 note : isoform 5 is encoded by transcript variant 5 product : tumor protein D52 isoform 5 protein_id : NP_033438.1

name	Tpd52 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:70608214 GeneID:21985 MGI:107749
definition	GO_component : GO:0005737 - cytoplasm [Evidence ISS]; GO:0005783 - endoplasmic reticulum [Evidence ISS]; GO:0048471 - perinuclear region [Evidence ISS] GO_function : GO:0005509 - calcium ion binding [Evidence ISS]; GO:0046982 - protein heterodimerization activity [Evidence IDA]; GO:0042803 - protein homodimerization activity [Evidence IDA] GO_process : GO:0030183 - B cell differentiation [Evidence ISS]; GO:0046903 - secretion [Evidence ISS] codon_start : 1 note : isoform 3 is encoded by transcript variant 3 product : tumor protein D52 isoform 3 protein_id : NP_001020434.1

name	Tpd52 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:70608205 GeneID:21985 MGI:107749
definition	GO_component : GO:0005737 - cytoplasm [Evidence ISS]; GO:0005783 - endoplasmic reticulum [Evidence ISS]; GO:0048471 - perinuclear region [Evidence ISS] GO_function : GO:0005509 - calcium ion binding [Evidence ISS]; GO:0046982 - protein heterodimerization activity [Evidence IDA]; GO:0042803 - protein homodimerization activity [Evidence IDA] GO_process : GO:0030183 - B cell differentiation [Evidence ISS]; GO:0046903 - secretion [Evidence ISS] codon_start : 1 note : isoform 4 is encoded by transcript variant 4 product : tumor protein D52 isoform 4 protein_id : NP_001020435.1

name	Tpd52 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:70608198 GeneID:21985 MGI:107749
definition	GO_component : GO:0005737 - cytoplasm [Evidence ISS]; GO:0005783 - endoplasmic reticulum [Evidence ISS]; GO:0048471 - perinuclear region [Evidence ISS] GO_function : GO:0005509 - calcium ion binding [Evidence ISS]; GO:0046982 - protein heterodimerization activity [Evidence IDA]; GO:0042803 - protein homodimerization activity [Evidence IDA] GO_process : GO:0030183 - B cell differentiation [Evidence ISS]; GO:0046903 - secretion [Evidence ISS] codon_start : 1 note : isoform 2 is encoded by transcript variant 2 product : tumor protein D52 isoform 2 protein_id : NP_001020433.1

name	Tpd52 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:70608194 GeneID:21985 MGI:107749
definition	GO_component : GO:0005737 - cytoplasm [Evidence ISS]; GO:0005783 - endoplasmic reticulum [Evidence ISS]; GO:0048471 - perinuclear region [Evidence ISS] GO_function : GO:0005509 - calcium ion binding [Evidence ISS]; GO:0046982 - protein heterodimerization activity [Evidence IDA]; GO:0042803 - protein homodimerization activity [Evidence IDA] GO_process : GO:0030183 - B cell differentiation [Evidence ISS]; GO:0046903 - secretion [Evidence ISS] codon_start : 1 note : isoform 1 is encoded by transcript variant 1 product : tumor protein D52 isoform 1 protein_id : NP_001020432.1

name	LOC100041389 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149250620 GeneID:100041389
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001476541.1

name	Zbtb10 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149250598 GeneID:229055 MGI:2139883
definition	codon_start : 1 product : zinc finger and BTB domain containing 10 isoform 1 protein_id : XP_485202.5

name	Zfp704 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:18875370 CCDS:CCDS17234.1 GeneID:170753 MGI:2180715
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 product : glucocorticoid induced gene 1 protein_id : NP_573481.1

name	LOC620822 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:620822
definition	number : 1 pseudo : _no_value

name	LOC620822 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:620822
definition	number : 2 pseudo : _no_value

name	LOC633072 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:633072
definition	number : 1 pseudo : _no_value

name	LOC633072 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:633072
definition	number : 2 pseudo : _no_value

name	LOC633072 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:633072
definition	number : 3 pseudo : _no_value

name	LOC667807 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149250592 GeneID:667807
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 6 Proteins product : similar to ubiquitin-like domain containing CTD phosphatase 1 pseudo : _no_value transcript_id : XR_030888.1

name	LOC545500 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149250593 GeneID:545500
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 156 ESTs, 5 Proteins product : similar to ubiquitin specific protease 1 pseudo : _no_value transcript_id : XR_030927.1

name	LOC620966 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149250618 GeneID:620966
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 mRNAs, 42 ESTs, 5 Proteins product : similar to Expressed sequence AI840826 pseudo : _no_value transcript_id : XR_032665.1

name	LOC667886 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149250596 GeneID:667886
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 112 ESTs, 2 Proteins product : similar to ribosomal protein pseudo : _no_value transcript_id : XR_031014.1

clone name	MSMg01-517D04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-393I03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-449B22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-405E05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-210D15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-162A20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-102J17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-546G21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-172N14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-139P07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-529I09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-312L20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-307E22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-303N22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-537L11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-539E08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-304B22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-095L08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-425E20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-448P19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-492N04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-388G24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-087G22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-300L11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-304F03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-179P19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-183H22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-351B07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-366O10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-185B17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-504G01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-134A07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-146O12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-485C21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-061I17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-408I08
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-520I16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-356N15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-098E23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-346K10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-324O05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-481I13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-194L09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-271G23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-457O23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-176P04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-117N01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-136D12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-298G05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-518O04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-467J19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-305L06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-535O16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-454H22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-500K06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-236C10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-512K13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-395H09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-427N01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-527E16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-273F06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-092M01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-386J05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-141B17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-132N15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-468C14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-118C04
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-097O15
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-490B11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-057G15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-427H21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-058M09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-369K05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-432O22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-501K06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-304K03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-290D10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-300C02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-074D14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-181D23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-413A08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-489O01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-331F14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-547I20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-418L22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-346I17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-341M16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-088H01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-317C22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-055O02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-081H20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-060N23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-133E05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-227M19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-259A03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-249L13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-344B20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-149O07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-015N22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-233J23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-195G19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-336G21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-030L02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-291O16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-293F09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-205B21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-327E10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-297A12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-307G19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-251E21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-053K12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-301E22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-183M23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-221F13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-247D24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-348I19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-275G24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-094C11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-010E22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-108K17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-028D22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-214C23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-277C10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-017H21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-226L20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-027B13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-205P24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-142F22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-322E18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-167L08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-273H24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-170L03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-080I08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-105F18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-320E11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-135F22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-040F04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-233K24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-055M14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-003M21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-090P10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-030L22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-089I10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-326N24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-284P10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-166F09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-076B02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-185A16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-263J07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-081M10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-049B19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-081O23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-033E15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-060P16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-022L12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-066E19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-124B17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-129O03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-135D13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-237D01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-245B12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-076P23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-257G04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-266E24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-158O16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-334O02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-051G04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-158M20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-152J21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-172J20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-016B18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-308C17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-057A09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-299B10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-178P19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-045O18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-039E03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-172G23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-097B14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-227N20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-144D06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-070J10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-049J04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-221H09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-327L05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-126P05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-308J12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-296O23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-098A07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-084N06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-090O16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-107P23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-245P21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-106A20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-258K09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-314D03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-141E17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-320K15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-264L12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-254F19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-307L10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-212D24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-275L07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-291D05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-131F06
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-003M21.b	B6Ng01-003M21.g
ACC	DH841401	DH841402
length	949	1,143
definition	DH841401\|Mus musculus domesticus DNA, BAC clone: B6Ng01-003M21, 5' end.	DH841402\|Mus musculus domesticus DNA, BAC clone: B6Ng01-003M21, 3' end.
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(8,347,835 - 8,348,784)	(8,468,619 - 8,469,779)
sequence	gaattcatataggaattcatataagaattcattaggtaacagttgataat atattaggaccaaaaaaataataatacaaaataaactaataataactgta tgtaccaaaaagaataattctgaaggagaaaaaataaatttaaagtaatt gtagaaagattacagtttcaatatataaatgtttcaaaattggacacagt gaataatatattaagcacaaaacatttgcattgaaataaatgataaaata agcagaaagaacttttttgcatgaatctagggcagcaagtcattctctgt gggaggaaaagcccagagtgtctcctagatatcgctaaattcagtcaagt tgacactaaagattgatcatcacggtgcccaaatgctcactgcggttatt actgatagtattaaattagttgtactataaaaatatacttttccatctga gatgctgcatattaatgcattttaaaaccaatgtgcagcaagagtctaac attaaaacaatccttaaaaggtacgcatgcttctggggactttgtagtca gtatctaacccccatgtcaagcactgctgctcactgcacacaaatccacc tcaagtcaccctgtgatgctttagtgtactgccagacagtctgacttaca gcaagagtatcactcacagcctgtcaggaccaagaatccaatgatttcaa gtgtttcttcctttttcctcaagcccacaccaggaatagaatgcagaatt aaacaagtggtcctgataacaatctaatccttctctatcaaaaattacat tatgaaaacgtgtgtaacttcaagtgttctacacaagactttccaaaacg tgataagtttgaaatgtttgctgagcgttagaaccaatacagatctgggc agagaatgaaatctactacaaacaccagcagtgctgggagggggtgggg	gaattccaggcacttgattggtcctgtggaagtgctattgaatcccgcac cccaaacccttgttacttctcaagtactcacagcttgtgtactttctgtc tttactgctttctgtagcactgtgcatgacaatcacctgtgatggtaaac aaacccaaacagacgttggtattccatctcagaccaagtcaattactatt tcctgtagacaagagataaacttggttgtattaaaaaaaaaaatctacac agaattatgactcccatctctggtcaaaagctctcaggaatggagtttgc tcatgctctggggactagtctgagctttagcagaaggacatctgccttct gacctgctgaagcagacagatagatgtgagtccatgaaggttacctccca gaatgctgctggaagcaagtatggttcacaggacagaagaaacgtttcta tgaagccatatggaagttaattattcacacagatttccagtgctcagcta actaggaaagcatttgtgagagggtcagtaggagtgtgggttgtgacgaa gttaaactgatggttagcagactgatacttttatttcctttatctgcaca gtcaaatatttattttttccctctttaaatggatggaggctatttatttc agagggcacccatattctagtatactcactgtctacaacaaatcatatag actgtattggcaaagcagcaatttatttgcttatggttctgagagtaagt aatctgggctgccatcttggaagttttgaaagagttttctgggtcattca aatagagacactgctcatcaatggctgaagtacaactgggctattgggaa cagcttcacgttaggtggctactgggttgtcagctggagtactcggttac ttcaaatggtctacactatgggagagtttccttcatactgtcccacttga accatgacttcagtgtcttcaaatcttgtttattgcattgcttgctgttg ttgattggaataagaaatctatcttggagtcctggttttgaaccctcatc ttcagctgtgctcttgtttagagcctttatgagtagccttcttaccagtg agccgctgaaggaagtcttgacctttgtagcaatctacattcc
quality values	Open. Hide. 61 41 24 38 61 39 28 61 61 61 61 61 61 61 43 43 61 47 32 61 61 61 61 61 61 50 36 41 43 30 21 49 55 36 36 55 61 61 61 61 59 61 61 61 61 59 61 61 61 61 61 61 61 61 59 59 59 55 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 59 59 59 55 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 59 59 59 59 59 61 61 59 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 59 61 61 59 59 61 59 59 44 55 59 61 61 61 61 61 59 61 61 59 52 59 59 59 52 59 61 61 59 61 59 61 59 52 59 59 50 41 59 61 61 59 59 59 61 61 61 61 59 61 61 55 55 59 61 61 59 61 61 61 59 59 61 61 59 61 61 61 59 61 61 59 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 59 61 61 61 61 61 61 61 61 61 61 59 61 61 59 59 55 61 55 61 61 61 61 61 61 55 55 61 61 55 61 55 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 55 55 55 55 61 61 61 55 61 61 61 50 55 50 55 55 55 61 55 61 55 55 61 61 61 61 61 61 61 55 61 55 55 55 61 61 61 61 61 61 61 61 61 61 61 53 61 61 61 61 61 61 61 61 50 61 53 61 61 61 53 61 50 52 50 61 61 61 61 61 61 61 53 61 61 61 61 53 61 61 61 50 50 50 50 50 50 50 50 50 50 43 61 61 61 61 61 61 39 47 47 38 46 39 50 46 42 47 50 53 61 61 61 53 53 61 47 53 53 57 57 53 57 53 57 53 57 53 53 57 53 52 53 50 53 47 34 42 42 35 50 52 57 57 47 43 53 53 47 53 52 53 53 50 53 53 53 53 53 53 53 53 53 47 52 53 53 53 43 53 47 47 47 32 43 47 43 47 39 50 57 57 47 50 50 39 43 47 47 53 53 57 43 36 47 52 53 53 52 53 50 50 53 45 45 47 47 52 47 52 40 45 52 45 45 52 41 50 53 53 52 33 53 52 37 50 41 45 50 50 52 52 57 45 52 42 42 42 40 52 53 33 47 46 37 42 38 47 33 53 39 36 30 23 41 34 25 41 24 37 36 57 38 38 42 44 36 34 39 53 33 28 57 45 31 24 34 52 40 57 33 42 53 42 41 37 23 34 29 33 42 38 41 27 39 33 31 25 38 35 37 26 37 38 40 36 48 48 40 30 30 33 35 36 40 28 30 40 33 37 26 37 20 30 35 33 41 30 53 26 25 13 39 30 32 44 45 30 30 30 31 45 31 28 32 36 31 21 37 32 34 39 29 33 25 31 39 29 25 29 34 36 37 29 37 31 33 51 51 46 29 24 47 29 36 28 48 30 29 29 29 35 47 37 38 29 24 33 47 29 29 33 25 32 28 33 19 24 23 20 29 28 39 17 33 29 28 29 30 22 25 24 29 28 36 21 29 41 40 21 32 24 30 30 34 29 27 28 29 29 28 28 26 25 32 46 29 23 33 51 31 23 38 29 51 28 29 33 28 26 29 19 29 25 28 26 38 31 39 27 21 23 20 25 29 28 29 24 24 27 26 27 29 23 38 31 24 28 21 38 10 24 24 22 29 25 51 20 29 33 33 33 33 33 29 33 30 29 14 12 10 6 8 23 23 28 6 7 10 18 23 13 30 42 11 18 14 42 30 33 14 19 23 28 28 38	Open. Hide. 55 61 52 49 55 19 19 13 12 12 13 10 19 31 29 55 59 59 59 61 59 49 59 59 59 61 59 61 59 61 59 59 61 59 61 61 59 61 61 55 59 59 61 61 61 61 61 61 59 61 59 59 59 52 49 59 59 59 61 61 61 61 61 61 61 61 61 61 61 59 61 59 59 61 55 59 61 61 61 61 61 61 59 61 61 59 61 59 61 59 59 59 61 61 59 61 61 61 61 61 61 61 61 59 61 59 61 59 61 61 61 61 59 59 61 59 59 61 61 61 61 61 61 61 61 59 61 61 61 61 59 61 59 61 59 61 61 59 61 59 61 59 59 61 61 61 61 61 61 61 59 59 59 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 59 61 61 61 61 61 59 61 61 61 61 59 52 61 61 61 59 59 61 61 61 59 59 59 61 59 59 59 59 61 59 59 55 55 59 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 59 59 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 44 37 61 61 61 61 61 61 61 61 59 59 61 59 59 61 59 59 61 59 61 61 61 61 61 61 61 61 59 59 61 61 61 61 59 59 59 59 59 59 49 59 59 49 61 61 43 55 61 61 59 59 59 59 61 61 61 59 59 59 59 61 61 61 61 61 61 61 61 61 59 59 41 52 52 36 61 61 55 52 61 55 61 55 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 55 61 55 55 61 61 55 55 61 61 55 55 49 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 55 61 61 61 61 61 61 61 55 61 61 55 61 61 61 55 49 55 55 50 55 55 61 61 61 61 61 53 61 53 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 52 53 53 61 61 61 61 52 50 61 61 53 53 61 61 53 43 53 61 61 61 53 53 53 61 61 50 61 61 61 61 39 61 43 61 61 52 53 53 45 50 61 40 61 61 53 61 61 61 61 61 61 61 61 61 53 61 53 52 50 57 57 50 57 47 47 53 52 47 53 53 53 50 57 47 53 53 57 53 53 52 45 57 45 53 53 47 52 50 53 53 53 53 47 53 53 47 47 50 47 47 50 53 45 53 52 53 53 52 34 52 43 47 53 53 38 47 42 42 50 50 57 41 53 47 53 53 47 47 38 43 26 41 53 50 53 47 50 40 50 37 53 52 45 37 25 47 50 39 30 57 38 53 50 53 57 46 42 38 53 53 45 50 16 57 18 57 57 38 31 25 43 46 45 53 52 52 53 50 42 53 47 43 50 50 50 47 53 52 38 53 39 52 37 39 40 40 37 25 52 52 37 52 53 53 50 41 53 53 53 53 36 53 50 50 57 36 37 47 30 41 38 37 33 57 44 40 44 33 25 53 27 28 38 52 40 37 53 53 41 24 36 43 37 37 33 52 53 15 33 33 48 37 27 9 37 31 30 30 29 30 37 41 40 33 48 36 44 57 31 35 40 32 19 27 27 40 37 36 45 30 46 45 23 23 48 48 45 31 29 48 51 40 27 41 18 32 51 46 41 30 30 47 51 44 24 32 20 29 9 14 16 46 37 32 30 25 33 22 29 24 29 35 34 35 27 18 21 23 29 31 29 24 29 30 23 20 29 29 30 7 10 19 28 28 24 29 29 29 29 39 36 29 33 29 33 19 30 43 28 36 28 28 21 27 31 30 33 18 14 30 21 35 29 29 13 41 21 36 30 26 38 29 31 28 36 36 39 25 26 30 29 27 39 22 26 26 20 32 18 15 21 25 26 27 27 21 20 27 20 24 28 28 29 23 15 30 17 26 22 27 12 25 22 24 23 16 24 15 16 25 30 38 27 33 17 21 13 20 42 18 21 25 26 31 29 19 28 28 27 24 29 27 29 36 19 19 23 23 30 32 23 22 15 13 36 22 28 28 22 22 22 25 9 7 17 29 15 19 27 9 9 38 51 26 7 15 23 9 16 23 29 5 13 8 26 27 17 19 29 31 31 28 13 15 26 24 19 15 17 17 11 8 8 9 13 15 29 9 9 34 6 6 6 20 9 26 36 17 14 12 11 16 11 7 9 17 18 9 11 4 4 3 14 13 17 12 4 20 29 14 9 12 12 7 5 10 13 10 16 5 7 9 11 20 22 6 26 12 11 5 7 12 7 7 9 11 6 7 14 24 21 4 12 5 6 10 7 26 7 12 14 6 7 5 3 5 11 4 8 25 10 21 5 4 3 5 5 4 1 3 8 12 3 15 22 5 4 4 5 13 4 6 8 9 14 19 4 9 20 4 7 4 11 7 13 5 5 10 7 9 10 13 6 7 4 4 20 5 4 3 8 3 6 5

Alignment Information

BAC End 1

BAC End 2

seq1: chr3_8347835_8348784
seq2: B6Ng01-003M21.b_45_993

seq1  GAATTCATATAGGAATTCATATAAGAATTCATTAGGTAACAGTTGATAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATATAGGAATTCATATAAGAATTCATTAGGTAACAGTTGATAAT  50

seq1  ATATTAGGACCAAAAAAATAATAATACAAAATAAACTAATAATAACTGTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTAGGACCAAAAAAATAATAATACAAAATAAACTAATAATAACTGTA  100

seq1  TGTACCAAAAAGAATAATTCTGAAGGAGAAAAAATAAATTTAAAGTAATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACCAAAAAGAATAATTCTGAAGGAGAAAAAATAAATTTAAAGTAATT  150

seq1  GTAGAAAGATTACAGTTTCAATATATAAATGTTTCAAAATTGGACACAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGAAAGATTACAGTTTCAATATATAAATGTTTCAAAATTGGACACAGT  200

seq1  GAATAATATATTAAGCACAAAACATTTGCATTGAAATAAATGATAAAATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAATATATTAAGCACAAAACATTTGCATTGAAATAAATGATAAAATA  250

seq1  AGCAGAAAGAACTTTTTTGCATGAATCTAGGGCAGCAAGTCATTCTCTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGAAAGAACTTTTTTGCATGAATCTAGGGCAGCAAGTCATTCTCTGT  300

seq1  GGGAGGAAAAGCCCAGAGTGTCTCCTAGATATCGCTAAATTCAGTCAAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGGAAAAGCCCAGAGTGTCTCCTAGATATCGCTAAATTCAGTCAAGT  350

seq1  TGACACTAAAGATTGATCATCACGGTGCCCAAATGCTCACTGCGGTTATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACACTAAAGATTGATCATCACGGTGCCCAAATGCTCACTGCGGTTATT  400

seq1  ACTGATAGTATTAAATTAGTTGTACTATAAAAATATACTTTTCCATCTGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGATAGTATTAAATTAGTTGTACTATAAAAATATACTTTTCCATCTGA  450

seq1  GATGCTGCATATTAATGCATTTTAAAACCAATGTGCAGCAAGAGTCTAAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCTGCATATTAATGCATTTTAAAACCAATGTGCAGCAAGAGTCTAAC  500

seq1  ATTAAAACAATCCTTAAAAGGTACGCATGCTTCTGGGGACTTTGTAGTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAAACAATCCTTAAAAGGTACGCATGCTTCTGGGGACTTTGTAGTCA  550

seq1  GTATCTAACCCCCATGTCAAGCACTGCTGCTCACTGCACACAAATCCACC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATCTAACCCCCATGTCAAGCACTGCTGCTCACTGCACACAAATCCACC  600

seq1  TCAAGTCACCCTGTGATGCTTTAGTGTACTGCCAGACAGTCTGACTTACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGTCACCCTGTGATGCTTTAGTGTACTGCCAGACAGTCTGACTTACA  650

seq1  GCAAGAGTATCACTCACAGCCTGTCAGGACCAAGAATCCAATGATTTCAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGAGTATCACTCACAGCCTGTCAGGACCAAGAATCCAATGATTTCAA  700

seq1  GTGTTTCTTCCTTTTTCCTCAAGCCCACACCAGGAATAGAATGCAGAATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTTCTTCCTTTTTCCTCAAGCCCACACCAGGAATAGAATGCAGAATT  750

seq1  AAACAAGTGGTCCTGATAACAATCTAATCCTTCTCTATCAAAAATTACAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAGTGGTCCTGATAACAATCTAATCCTTCTCTATCAAAAATTACAT  800

seq1  TATGAAAACGTGTGTAACTTCAAGTGTTCTACACAAGACTTTCCAAAACG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAAAACGTGTGTAACTTCAAGTGTTCTACACAAGACTTTCCAAAACG  850

seq1  TGATAAGTTTGAAATGTTTGCTGAGCGTTAGAACCAATACAGATCTGGGC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATAAGTTTGAAATGTTTGCTGAGCGTTAGAACCAATACAGATCTGGGC  900

seq1  AGAGAATGAAATCTACTACAAACACCAGCAGGTGCTGGGGAGGGGTGGGG  950
      |||||||||||||||||||||||||||||| ||||||||  |||||||||
seq2  AGAGAATGAAATCTACTACAAACACCAGCA-GTGCTGGGAGGGGGTGGGG  949

seq1: chr3_8468619_8469779
seq2: B6Ng01-003M21.g_69_1211 (reverse)

seq1  GGAA-GTAGATTTGGCTACAAAGGTCAAGACCCTTCCTCTCA-CGGCTCA  48
      |||| |||||||  ||||||||||||||||  |||||| ||| |||||||
seq2  GGAATGTAGATT--GCTACAAAGGTCAAGA--CTTCCT-TCAGCGGCTCA  45

seq1  CTTTGCTAAGGAAGCCCTACCTCATAAA-GCTCTTAAAACAAGGAGCACA  97
      |  || |||| | |  ||| |||||||| |||||  |||||| |||||||
seq2  C--TGGTAAGAAGG--CTA-CTCATAAAGGCTCT--AAACAA-GAGCACA  87

seq1  GGCTGAAGATTGAGTGTTCAAAACCAGGAACCTCCAAGATAGATTTCTTA  147
       |||||||| |||| ||||||||||||||  |||||||||||||||||||
seq2  -GCTGAAGA-TGAGGGTTCAAAACCAGGA--CTCCAAGATAGATTTCTTA  133

seq1  TTCAAATC-ACAACAGCAAGCAATGCAATAAACAAAGATTTTTGAAGACA  196
      ||| |||| |||||||||||||||||||||||| ||||  ||||||||||
seq2  TTCCAATCAACAACAGCAAGCAATGCAATAAAC-AAGA--TTTGAAGACA  180

seq1  CTGAAGTCATTGGTTCAAGTGGGACAGTATGAAGGAAACTCTCCCATAGT  246
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAGTCA-TGGTTCAAGTGGGACAGTATGAAGGAAACTCTCCCATAGT  229

seq1  GTAGACCATTTGAAGTAACCGAGTACTCCAGCTTGACAACCCAGTAGCCA  296
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  GTAGACCATTTGAAGTAACCGAGTACTCCAGC-TGACAACCCAGTAGCCA  278

seq1  CCTAACGTGAAGCTGTTCCCAATAGCCCAGTTGTACTTCAGCCATTGATG  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAACGTGAAGCTGTTCCCAATAGCCCAGTTGTACTTCAGCCATTGATG  328

seq1  AGCAGTGTCTCTATTTGAATGACCCAGAAAACTCTTTCAAAACTTCCAAG  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGTGTCTCTATTTGAATGACCCAGAAAACTCTTTCAAAACTTCCAAG  378

seq1  ATGGCAGCCCAGATTACTTACTCTCAGAACCATAAGCAAATAAATTGCTG  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCAGCCCAGATTACTTACTCTCAGAACCATAAGCAAATAAATTGCTG  428

seq1  CTTTGCCAATACAGTCTATATGATTTGTTGTAGACAGTGAGTATACTAGA  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGCCAATACAGTCTATATGATTTGTTGTAGACAGTGAGTATACTAGA  478

seq1  ATATGGGTGCCCTCTGAAATAAATAGCCTCCATCCATTTAAAGAGGGAAA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGGGTGCCCTCTGAAATAAATAGCCTCCATCCATTTAAAGAGGGAAA  528

seq1  AAATAAATATTTGACTGTGCAGATAAAGGAAATAAAAGTATCAGTCTGCT  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAATATTTGACTGTGCAGATAAAGGAAATAAAAGTATCAGTCTGCT  578

seq1  AACCATCAGTTTAACTTCGTCACAACCCACACTCCTACTGACCCTCTCAC  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCATCAGTTTAACTTCGTCACAACCCACACTCCTACTGACCCTCTCAC  628

seq1  AAATGCTTTCCTAGTTAGCTGAGCACTGGAAATCTGTGTGAATAATTAAC  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGCTTTCCTAGTTAGCTGAGCACTGGAAATCTGTGTGAATAATTAAC  678

seq1  TTCCATATGGCTTCATAGAAACGTTTCTTCTGTCCTGTGAACCATACTTG  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCATATGGCTTCATAGAAACGTTTCTTCTGTCCTGTGAACCATACTTG  728

seq1  CTTCCAGCAGCATTCTGGGAGGTAACCTTCATGGACTCACATCTATCTGT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCAGCAGCATTCTGGGAGGTAACCTTCATGGACTCACATCTATCTGT  778

seq1  CTGCTTCAGCAGGTCAGAAGGCAGATGTCCTTCTGCTAAAGCTCAGACTA  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTTCAGCAGGTCAGAAGGCAGATGTCCTTCTGCTAAAGCTCAGACTA  828

seq1  GTCCCCAGAGCATGAGCAAACTCCATTCCTGAGAGCTTTTGACCAGAGAT  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCCCAGAGCATGAGCAAACTCCATTCCTGAGAGCTTTTGACCAGAGAT  878

seq1  GGGAGTCATAATTCTGTGTAGATTTTTTTTTTTAATACAACCAAGTTTAT  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGTCATAATTCTGTGTAGATTTTTTTTTTTAATACAACCAAGTTTAT  928

seq1  CTCTTGTCTACAGGAAATAGTAATTGACTTGGTCTGAGATGGAATACCAA  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTGTCTACAGGAAATAGTAATTGACTTGGTCTGAGATGGAATACCAA  978

seq1  CGTCTGTTTGGGTTTGTTTACCATCACAGGTGATTGTCATGCACAGTGCT  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTCTGTTTGGGTTTGTTTACCATCACAGGTGATTGTCATGCACAGTGCT  1028

seq1  ACAGAAAGCAGTAAAGACAGAAAGTACACAAGCTGTGAGTACTTGAGAAG  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAAAGCAGTAAAGACAGAAAGTACACAAGCTGTGAGTACTTGAGAAG  1078

seq1  TAACAAGGGTTTGGGGTGCGGGATTCAATAGCACTTCCACAGGACCAATC  1146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAAGGGTTTGGGGTGCGGGATTCAATAGCACTTCCACAGGACCAATC  1128

seq1  AAGTGCCTGGAATTC  1161
      |||||||||||||||
seq2  AAGTGCCTGGAATTC  1143

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Alignment Information