BAC Information

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BAC

Clone NameB6Ng01-004G15
Chromosome3 (Build37)
Map Location 11,191,375 - 11,307,039
singlet/doubletdoublet
Overlap genenone
Upstream geneFabp9, Fabp4, 1700008G05Rik, Impa1, Slc10a5, Zfand1, Chmp4c, Snx16, LOC670564, LOC383826, EG667978
Downstream geneLOC667999
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-004G15.bB6Ng01-004G15.g
ACCDH841830DH841831
length1,146622
definitionDH841830|Mus musculus domesticus DNA, BAC clone: B6Ng01-004G15, 5' end.DH841831|Mus musculus domesticus DNA, BAC clone: B6Ng01-004G15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(11,305,886 - 11,307,039)(11,191,375 - 11,191,996)
sequence
gaattccgcacattttgcattgaatgttttatcttcgcccctatctcctc
ccagacccaccctccatgctgtatccacagaactcagcattcgcactttc
ctatgcccatcattttctattgctactgtttgtttctaggatttctaaac
actactccccaactaaactcaccaactagtctttgaaacatgctttactt
cttgaattttaatattttaaaatccaaagcatatttaaggatagcagata
tataagatttaagagtcaagtttcaactgtgaagtacaagtaatagacag
ttaacctaattttaaactccagtcaattacgtactttttacagcatctca
ataaacaaataaacaaacaaacaaacaaacaaacagttggattcaggtgt
ctgctcacaagagaggagctgcaggtctgtggttggatgtttccccagaa
gcaggttgtctctggcctagagagtaaatctcaactcctcacctcatgga
aggatgctgttcacctcagggcaccttcaggtcaagcaatatttttagat
gcttcttattattcaatctctggaagtcatatgatgaatctggcatccat
gatgtgtaattgaagtcccaacacatgtacacatatttctacaataaata
cttagacgtgcaaaaacagataggattaaatttctccattctctaataca
attttatttaaattctatataacacaattctaaactgcaattttatttat
aattgtagttattgcagcagttagggtaggaaataactattttaaaattt
acccattttccaattttctatatttgctttgttcttgttacatgttttat
atatttagtaatcttaatttaattatataatactttattatacatttatt
atactacatttatagaaacttctagtaatatatctttgaaagtctcatcc
acctcaactacaagaatgaggctaaattttatttctaaaattctattttt
taataaaatcctttcaattttgttttgtggttaataaaatccatggaatt
taattgactgcttatcaagctaatcaactgtcagatacatctttatttat
tatttattagtaattgtattcattttaaatgtgaaatgcagatcaa
gaattcaaatgactcctttattaggtgagtatcatagttagatggaatac
aaatcattaaggaaagttttacgaatcaaatctgggcagagaataaagac
aatgtaccaattagtgtggtcagcccaaggtcagtcattctctgcatttg
aacaggctgtgattttcttcagcggtctctgactgctgagaaggaagctt
ctttgatgaggggtattagctacgcttatctgtcggttaagcaaaagtgt
ttagaatgcagtcagaagttatactggcttagggtagtgagagctgtatg
ttctcccttaaggtccatggcttcaccagccatgggtactggctagtttt
acaataacagatatgaattcccatccactgagtggcccttaagacaacgt
agatgtctgctagctacttctaggataaaaatgctactgtttcccttgtg
atttctaacctttctggtcattgctgtggcttatctaggcaacacagctg
aatgagcaattgattgcttttctcccttggagcttatataactcttccag
aactgagaggtaggcttcaaggaggagctatccagctcagttggagctgg
attctttagtcttctaactgaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_11305886_11307039
seq2: B6Ng01-004G15.b_45_1190 (reverse)

seq1  TTGATCTTGGCATTTCACATTTAAAATGAATACAAAATTACTAATAAATA  50
      |||||||  ||||||||||||||||||||||||  |||||||||||||||
seq2  TTGATCT--GCATTTCACATTTAAAATGAATAC--AATTACTAATAAATA  46

seq1  ATAAATAAAGATGTATCTGACAGTTGATTAGCTTGATAAGCAGGTCACTA  100
      |||||||||||||||||||||||||||||||||||||||||||   | ||
seq2  ATAAATAAAGATGTATCTGACAGTTGATTAGCTTGATAAGCAGTCAATTA  96

seq1  AAATCCATGGATTTTATTATACCAACAAAACAAAATTGAAAGGATTTTAT  150
      || |||||||||||||||| ||| ||||||||||||||||||||||||||
seq2  AATTCCATGGATTTTATTA-ACC-ACAAAACAAAATTGAAAGGATTTTAT  144

seq1  TAAAAAATAGAATTTTAGAAATAAAAATTTTAGCCTCATTCTTGTAGTTG  200
      ||||||||||||||||||||||||||  ||||||||||||||||||||||
seq2  TAAAAAATAGAATTTTAGAAATAAAA--TTTAGCCTCATTCTTGTAGTTG  192

seq1  AGGTGGATGAGACTTTCAAAGATATATTACTAGAAGTTTCTATAAATGTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGGATGAGACTTTCAAAGATATATTACTAGAAGTTTCTATAAATGTA  242

seq1  GTATAATAAATGTATAATAAAGTATTATATAATTAAATTAAGATTACTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATAATAAATGTATAATAAAGTATTATATAATTAAATTAAGATTACTAA  292

seq1  ATATATAAAACATGTAACAAGAACAAAGCAAATATAGAAAATTGGAAAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATAAAACATGTAACAAGAACAAAGCAAATATAGAAAATTGGAAAAT  342

seq1  GGGTAAATTTTAAAATAGTTATTTCCTACCCTAACTGCTGCAATAACTAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTAAATTTTAAAATAGTTATTTCCTACCCTAACTGCTGCAATAACTAC  392

seq1  AATTATAAATAAAATTGCAGTTTAGAATTGTGTTATATAGAATTTAAATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATAAATAAAATTGCAGTTTAGAATTGTGTTATATAGAATTTAAATA  442

seq1  AAATTGTATTAGAGAATGGAGAAATTTAATCCTATCTGTTTTTGCACGTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTGTATTAGAGAATGGAGAAATTTAATCCTATCTGTTTTTGCACGTC  492

seq1  TAAGTATTTATTGTAGAAATATGTGTACATGTGTTGGGACTTCAATTACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTATTTATTGTAGAAATATGTGTACATGTGTTGGGACTTCAATTACA  542

seq1  CATCATGGATGCCAGATTCATCATATGACTTCCAGAGATTGAATAATAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCATGGATGCCAGATTCATCATATGACTTCCAGAGATTGAATAATAAG  592

seq1  AAGCATCTAAAAATATTGCTTGACCTGAAGGTGCCCTGAGGTGAACAGCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCATCTAAAAATATTGCTTGACCTGAAGGTGCCCTGAGGTGAACAGCA  642

seq1  TCCTTCCATGAGGTGAGGAGTTGAGATTTACTCTCTAGGCCAGAGACAAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTCCATGAGGTGAGGAGTTGAGATTTACTCTCTAGGCCAGAGACAAC  692

seq1  CTGCTTCTGGGGAAACATCCAACCACAGACCTGCAGCTCCTCTCTTGTGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTTCTGGGGAAACATCCAACCACAGACCTGCAGCTCCTCTCTTGTGA  742

seq1  GCAGACACCTGAATCCAACTGTTTGTTTGTTTGTTTGTTTGTTTATTTGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGACACCTGAATCCAACTGTTTGTTTGTTTGTTTGTTTGTTTATTTGT  792

seq1  TTATTGAGATGCTGTAAAAAGTACGTAATTGACTGGAGTTTAAAATTAGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTGAGATGCTGTAAAAAGTACGTAATTGACTGGAGTTTAAAATTAGG  842

seq1  TTAACTGTCTATTACTTGTACTTCACAGTTGAAACTTGACTCTTAAATCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACTGTCTATTACTTGTACTTCACAGTTGAAACTTGACTCTTAAATCT  892

seq1  TATATATCTGCTATCCTTAAATATGCTTTGGATTTTAAAATATTAAAATT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATATCTGCTATCCTTAAATATGCTTTGGATTTTAAAATATTAAAATT  942

seq1  CAAGAAGTAAAGCATGTTTCAAAGACTAGTTGGTGAGTTTAGTTGGGGAG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAAGTAAAGCATGTTTCAAAGACTAGTTGGTGAGTTTAGTTGGGGAG  992

seq1  TAGTGTTTAGAAATCCTAGAAACAAACAGTAGCAATAGAAAATGATGGGC  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGTTTAGAAATCCTAGAAACAAACAGTAGCAATAGAAAATGATGGGC  1042

seq1  ATAGGAAAGTGCGAATGCTGAGTTCTGTGGATACAGCATGGAGGGTGGGT  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGAAAGTGCGAATGCTGAGTTCTGTGGATACAGCATGGAGGGTGGGT  1092

seq1  CTGGGAGGAGATAGGGGCGAAGATAAAACATTCAATGCAAAATGTGCGGA  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGAGGAGATAGGGGCGAAGATAAAACATTCAATGCAAAATGTGCGGA  1142

seq1  ATTC  1154
      ||||
seq2  ATTC  1146

seq1: chr3_11191375_11191996
seq2: B6Ng01-004G15.g_63_684

seq1  GAATTCAAATGACTCCTTTATTAGGTGAGTATCATAGTTAGATGGAATAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAATGACTCCTTTATTAGGTGAGTATCATAGTTAGATGGAATAC  50

seq1  AAATCATTAAGGAAAGTTTTACGAATCAAATCTGGGCAGAGAATAAAGAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCATTAAGGAAAGTTTTACGAATCAAATCTGGGCAGAGAATAAAGAC  100

seq1  AATGTACCAATTAGTGTGGTCAGCCCAAGGTCAGTCATTCTCTGCATTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTACCAATTAGTGTGGTCAGCCCAAGGTCAGTCATTCTCTGCATTTG  150

seq1  AACAGGCTGTGATTTTCTTCAGCGGTCTCTGACTGCTGAGAAGGAAGCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGGCTGTGATTTTCTTCAGCGGTCTCTGACTGCTGAGAAGGAAGCTT  200

seq1  CTTTGATGAGGGGTATTAGCTACGCTTATCTGTCGGTTAAGCAAAAGTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGATGAGGGGTATTAGCTACGCTTATCTGTCGGTTAAGCAAAAGTGT  250

seq1  TTAGAATGCAGTCAGAAGTTATACTGGCTTAGGGTAGTGAGAGCTGTATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAATGCAGTCAGAAGTTATACTGGCTTAGGGTAGTGAGAGCTGTATG  300

seq1  TTCTCCCTTAAGGTCCATGGCTTCACCAGCCATGGGTACTGGCTAGTTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCCCTTAAGGTCCATGGCTTCACCAGCCATGGGTACTGGCTAGTTTT  350

seq1  ACAATAACAGATATGAATTCCCATCCACTGAGTGGCCCTTAAGACAACGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATAACAGATATGAATTCCCATCCACTGAGTGGCCCTTAAGACAACGT  400

seq1  AGATGTCTGCTAGCTACTTCTAGGATAAAAATGCTACTGTTTCCCTTGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGTCTGCTAGCTACTTCTAGGATAAAAATGCTACTGTTTCCCTTGTG  450

seq1  ATTTCTAACCTTTCTGGTCATTGCTGTGGCTTATCTAGGCAACACAGCTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTAACCTTTCTGGTCATTGCTGTGGCTTATCTAGGCAACACAGCTG  500

seq1  AATGAGCAATTGATTGCTTTTCTCCCTTGGAGCTTATATAACTCTTCCAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAGCAATTGATTGCTTTTCTCCCTTGGAGCTTATATAACTCTTCCAG  550

seq1  AACTGAGAGGTAGGCTTCAAGGAGGAGCTATCCAGCTCAGTTGGAGCTGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGAGAGGTAGGCTTCAAGGAGGAGCTATCCAGCTCAGTTGGAGCTGG  600

seq1  ATTCTTTAGTCTTCTAACTGAA  622
      ||||||||||||||||||||||
seq2  ATTCTTTAGTCTTCTAACTGAA  622