BAC Information

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BAC

Clone NameB6Ng01-004K15
Chromosome3 (Build37)
Map Location 24,061,991 - 24,063,174
singlet/doubletsinglet
Overlap geneEG635702
Upstream geneLOC100039548
Downstream geneEG665189
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-004K15.bB6Ng01-004K15.g
ACCDH842012DH842013
length1,170430
definitionDH842012|Mus musculus domesticus DNA, BAC clone: B6Ng01-004K15, 5' end.DH842013|Mus musculus domesticus DNA, BAC clone: B6Ng01-004K15, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcattcacacaatcataattaatgttccattattataatgacctga
gacaagtaattttcttggcaggacttcaaagaccagttgttcattcaagt
aaggttttagtaatcctgaattgttggcaggttcaactatggagtcatta
atatggctcaatatgtatttccatttgttttaaatgaaattcactctaag
gatttgttgtggtttggttttccccatctgagtatctactatttcttaaa
agttttagaaaaaaaacccaataatatcagtttaaaatttatctctcacc
cacagcaatgatgatcgccattaatactttaaatctagatatcaagagga
gtcttagatcagtttcaaaccctgaaattcagaaggcagcttacttaaat
gttaaatgtcattttacaatttattcctcacccacagcaatgatggttgt
cattaataacttgaacactttatatttttgtaagtaattaaatgaattta
agttttgttctaaaaaagtaagaaaaaggaacacccctttcaggtatcct
ctgggatgagtttggtgtctgttggcacttttccttgcttagtgttgttt
ctcattttcgaatgatgttggaatgaactttgactttgagtgactaggtt
ggttctgttcttgaacaaaataatttgactttcttaaatatgaaaataat
agtattaaagaaatgattcaagaatccaaaaagcacatggccttgattaa
tccagttccctttctatgttgtaaaaggcattattctcaattaaaatgct
ccgtgagtaaatgaagtgagcctgcttcaatcctcctcattcagaaactt
attttttagacataatggaagaaatcctaccaccaacataggagctactg
acatttaactcttctgaaagagagtctgtgttctttaaggttgtgacctg
tgactgatcaaacacttgccaaggcaggctctactcctaagactagttgg
gtacccaaactaaaatggatgggaggcataaaagaaactaaaaggtcaga
aggatgggtgattgtcctaaagaaaaagtgaatgtactcaatatttgtct
taatccccaaagattatttaaataatgttagtaggtcagatggcgagaca
gtctagacactgcgtcaggt

agtacaaggaggggttccaaggcctcacactgttactgaggctatggggt
actcacaaaaagggacctagcatgaccatactctgggagatacaacaagc
agctgaaagacttagatgcacatgcaaccaatggacagatgctactgacc
cctgtgtttgaattagagaaaggctggaagaagctgagaaggaggtcaac
ccaacaggaggaccagcagtctcaattaacctggacccctgatatctctc
caacactggaccaccaaccaggcagcatacaagagctgatataggcccct
aacacatataccgcagaggactcctgggtctggattcagtcagagaagat
gcacctatccctcaagagactgaaggaatctgggaatttagaggaattta
gaggtctggttgggagggtgatggggggat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_24061991_24063174
seq2: B6Ng01-004K15.b_46_1215 (reverse)

seq1  ACCTGAACGCAGTGCCTTAGACTG-CTCGGCCATCCTGACCTACTAAACA  49
      ||||| |||||||| | ||||||| ||| ||||| |||||||||| ||||
seq2  ACCTG-ACGCAGTGTC-TAGACTGTCTC-GCCAT-CTGACCTACT-AACA  45

seq1  TTATTTTAAATTAAATCTTTGAGAATTTAAGACAATATATTTGAGTACAT  99
      ||| |||||||  |||||||| | | ||||||||| ||| ||||||||||
seq2  TTA-TTTAAAT--AATCTTTGGGGA-TTAAGACAA-ATA-TTGAGTACAT  89

seq1  TCACTTATTCTATA-GACATTCACCCATACCTTCTGACCTTTTAGTTTTC  148
      |||||| |||| || |||| |||||||| |||||||||||||||| ||||
seq2  TCACTTTTTCTTTAGGACAATCACCCAT-CCTTCTGACCTTTTAG-TTTC  137

seq1  TTTTATGCCCTCCCATCCATTTTAGTTTGGGTTACCCAACTAGTCTTAGG  198
      ||||||| ||||||||||||||||||||||| ||||||||||||||||||
seq2  TTTTATG-CCTCCCATCCATTTTAGTTTGGG-TACCCAACTAGTCTTAGG  185

seq1  AGTAGAGCCTGCCTTGGCAAGTGTTTGATCAGTCACAGGTCACAACCTTA  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGAGCCTGCCTTGGCAAGTGTTTGATCAGTCACAGGTCACAACCTTA  235

seq1  AAGAACACAGACTCTCTTTTCAGAAGAGTTAAATGTCAGTAGCTCCTATG  298
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  AAGAACACAGACTCTC-TTTCAGAAGAGTTAAATGTCAGTAGCTCCTATG  284

seq1  TTGGTGGTAGGATTTCTTCCATTATGTCTAAAAAATAAGTTTCTGAATGA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTGGTAGGATTTCTTCCATTATGTCTAAAAAATAAGTTTCTGAATGA  334

seq1  GGAGGATTGAAGCAGGCTCACTTCATTTACTCACGGAGCATTTTAATTGA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGATTGAAGCAGGCTCACTTCATTTACTCACGGAGCATTTTAATTGA  384

seq1  GAATAATGCCTTTTACAACATAGAAAGGGAACTGGATTAATCAAGGCCAT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAATGCCTTTTACAACATAGAAAGGGAACTGGATTAATCAAGGCCAT  434

seq1  GTGCTTTTTGGATTCTTGAATCATTTCTTTAATACTATTATTTTCATATT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTTTTTGGATTCTTGAATCATTTCTTTAATACTATTATTTTCATATT  484

seq1  TAAGAAAGTCAAATTATTTTGTTCAAGAACAGAACCAACCTAGTCACTCA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAAAGTCAAATTATTTTGTTCAAGAACAGAACCAACCTAGTCACTCA  534

seq1  AAGTCAAAGTTCATTCCAACATCATTCGAAAATGAGAAACAACACTAAGC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCAAAGTTCATTCCAACATCATTCGAAAATGAGAAACAACACTAAGC  584

seq1  AAGGAAAAGTGCCAACAGACACCAAACTCATCCCAGAGGATACCTGAAAG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAAAAGTGCCAACAGACACCAAACTCATCCCAGAGGATACCTGAAAG  634

seq1  GGGTGTTCCTTTTTCTTACTTTTTTAGAACAAAACTTAAATTCATTTAAT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGTTCCTTTTTCTTACTTTTTTAGAACAAAACTTAAATTCATTTAAT  684

seq1  TACTTACAAAAATATAAAGTGTTCAAGTTATTAATGACAACCATCATTGC  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTACAAAAATATAAAGTGTTCAAGTTATTAATGACAACCATCATTGC  734

seq1  TGTGGGTGAGGAATAAATTGTAAAATGACATTTAACATTTAAGTAAGCTG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGGTGAGGAATAAATTGTAAAATGACATTTAACATTTAAGTAAGCTG  784

seq1  CCTTCTGAATTTCAGGGTTTGAAACTGATCTAAGACTCCTCTTGATATCT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCTGAATTTCAGGGTTTGAAACTGATCTAAGACTCCTCTTGATATCT  834

seq1  AGATTTAAAGTATTAATGGCGATCATCATTGCTGTGGGTGAGAGATAAAT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTTAAAGTATTAATGGCGATCATCATTGCTGTGGGTGAGAGATAAAT  884

seq1  TTTAAACTGATATTATTGGGTTTTTTTTCTAAAACTTTTAAGAAATAGTA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAACTGATATTATTGGGTTTTTTTTCTAAAACTTTTAAGAAATAGTA  934

seq1  GATACTCAGATGGGGAAAACCAAACCACAACAAATCCTTAGAGTGAATTT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACTCAGATGGGGAAAACCAAACCACAACAAATCCTTAGAGTGAATTT  984

seq1  CATTTAAAACAAATGGAAATACATATTGAGCCATATTAATGACTCCATAG  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTAAAACAAATGGAAATACATATTGAGCCATATTAATGACTCCATAG  1034

seq1  TTGAACCTGCCAACAATTCAGGATTACTAAAACCTTACTTGAATGAACAA  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAACCTGCCAACAATTCAGGATTACTAAAACCTTACTTGAATGAACAA  1084

seq1  CTGGTCTTTGAAGTCCTGCCAAGAAAATTACTTGTCTCAGGTCATTATAA  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTCTTTGAAGTCCTGCCAAGAAAATTACTTGTCTCAGGTCATTATAA  1134

seq1  TAATGGAACATTAATTATGATTGTGTGAATGAATTC  1184
      ||||||||||||||||||||||||||||||||||||
seq2  TAATGGAACATTAATTATGATTGTGTGAATGAATTC  1170


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