BAC Information

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BAC

Clone NameB6Ng01-005A14
Chromosome3 (Build37)
Map Location 115,028,147 - 115,029,337
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043220, Olfm3
Downstream geneEG546808, Edg1, Dph5, LOC626061, Slc30a7, Extl2, Vcam1, Gpr88, Cdc14a
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-005A14.bB6Ng01-005A14.g
ACCDH842286DH842287
length1,1711,118
definitionDH842286|Mus musculus domesticus DNA, BAC clone: B6Ng01-005A14, 5' end.DH842287|Mus musculus domesticus DNA, BAC clone: B6Ng01-005A14, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttaaagaaagagatcttccttatcaccacaataatcaaatatgc
tctaaagtaaattacatgttttcaacagcgaggcaataggaaaaacacca
gactaaacatatcactgagctttaagagagatgaatttatggtattctct
ggcatggaattgcaaagattaaataaattaaagctttttcatcataagtt
ctgtatggaataataaaagtctcctgtaagaaaaatcagataaaagactg
ctacctcttttgagatttccaagaacccccttggccttttgtatcctcat
ttcatgtataaggctgttaaaccttagtccttgaagaaactgcctagaat
tccctttaggtctttcaaattatctctgatgtgaaccaacaacaacaaca
acaattgtctatgttattcatagaatgagcatcctttaaattaccttact
tatccagatgtaacatgaaaatcaaacacaacaatccggaggatagcatt
ttcccagactagcctaacactgctttcctaattagaaagtgatgtcatga
aaactttggcaaagcctgtgaattcagtacaaacaacatgttgcctctga
aatcagcatgcataaaaaggcctttagcgaaggttcaggttcagatatgt
gaaaccacttcaaggcaaggttaagagaagagtagcatcacaatatggct
gttctccacaaatagatatttcagactggcatcagacatcaaactctgaa
aattaacaacagttaaacctgctcccatttgccactctcatctgcaaccc
accctgttcagtggaaagcaaagctcactagagacctttgatttgaaact
ccccattttgctaaaaacagatagcaaatgtctgttcttgtaatgtatac
aacaccttgttttctgatggtagaagatttctaatcctatcttagagata
ccagcttattcatgttcatggctgctctactcacaaacaagaaataaaaa
acagctaaaaatgatctgatgatggataataaaaaaaatgtaggctcttc
taatttcttttacttatcactttacatctgctaactacccctcccgggtc
cctcttcctacaatcgtcccacacactcctcctaccctctggaaagggtg
tggatcctggtacccactctg
gaattcttgcatagagtgaagtgtgggagattctcccgggaagatgtgac
aagtcagactcatagtaccgtagcataggcaaccacatggtagaatgcag
aatagagtcaatgggttactttatgttgtgatctagtcagaaaagatcct
aactatatcgccaaaggatttgtaaatatattttgagtctaaatcttatt
tctgtgtgaatggggcagggaggaagaaccaaacccaactcctacaacaa
gcctctgagcctgtcttggaaatcttaccagagaagtttaactgaactga
ggatctcaataggaatgtgggcagtatcactgtgtggcccagggtcttgg
atggagaaggtgagtggagcaacagcattcattgttctctggatcctgac
tgttgacacaacatggccagctgctgaatgttgctgttgtaacactctcc
tcacagtgatgtactatacccttgaactgtaaaaacaaaaaacaaaaaat
aaacaaaaacaaaaaaaccccaaaaatataaatcttttgttctttatgct
acttgtcttgggtattttgtcatagcagcaagaaaaatgtgataatcctt
gctaagaagccatgctgatgtcacagcaatggatgccaagatgctgagta
aagtcaggggtgcactgtggtttactctgttgagtagaattactgtgaaa
gatagtgaataaattctcctatttgtatttagtgtgctatacaggcagaa
ctcaatgtttagcaaacaaaacaaggtgcggacaaccttggatggaatgg
ctgaagactgtcaatagattatgtttggagactactgtgaaaagctatca
tcttaaaaaaacatgcttctattctgaaggagaaagagaggtttgtagtc
tgagtctcttcaaatgatgacacagtgattgccattagtttattctgctc
ctggcaagcagctcaatgatgaatctgtactccttgctttgatattactg
tattatcgaactgcatgttctactggaacaccaacaattcgttctcccac
ttgttgattaggtttagccgccattgggattggctgttattacctcagtg
tacagtgaacaattgggc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_115028147_115029337
seq2: B6Ng01-005A14.b_48_1218

seq1  GAATTCTTAAAGAAAGAGATCTTCCTTATCACCACAATAATCAAATATGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTAAAGAAAGAGATCTTCCTTATCACCACAATAATCAAATATGC  50

seq1  TCTAAAGTAAATTACATGTTTTCAACAGCGAGGCAATAGGAAAAACACCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAAGTAAATTACATGTTTTCAACAGCGAGGCAATAGGAAAAACACCA  100

seq1  GACTAAACATATCACTGAGCTTTAAGAGAGATGAATTTATGGTATTCTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTAAACATATCACTGAGCTTTAAGAGAGATGAATTTATGGTATTCTCT  150

seq1  GGCATGGAATTGCAAAGATTAAATAAATTAAAGCTTTTTCATCATAAGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATGGAATTGCAAAGATTAAATAAATTAAAGCTTTTTCATCATAAGTT  200

seq1  CTGTATGGAATAATAAAAGTCTCCTGTAAGAAAAATCAGATAAAAGACTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTATGGAATAATAAAAGTCTCCTGTAAGAAAAATCAGATAAAAGACTG  250

seq1  CTACCTCTTTTGAGATTTCCAAGAACCCCCTTGGCCTTTTGTATCCTCAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCTCTTTTGAGATTTCCAAGAACCCCCTTGGCCTTTTGTATCCTCAT  300

seq1  TTCATGTATAAGGCTGTTAAACCTTAGTCCTTGAAGAAACTGCCTAGAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATGTATAAGGCTGTTAAACCTTAGTCCTTGAAGAAACTGCCTAGAAT  350

seq1  TCCCTTTAGGTCTTTCAAATTATCTCTGATGTGAACCAACAACAACAACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTTTAGGTCTTTCAAATTATCTCTGATGTGAACCAACAACAACAACA  400

seq1  ACAATTGTCTATGTTATTCATAGAATGAGCATCCTTTAAATTACCTTACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATTGTCTATGTTATTCATAGAATGAGCATCCTTTAAATTACCTTACT  450

seq1  TATCCAGATGTAACATGAAAATCAAACACAACAATCCGGAGGATAGCATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCAGATGTAACATGAAAATCAAACACAACAATCCGGAGGATAGCATT  500

seq1  TTCCCAGACTAGCCTAACACTGCTTTCCTAATTAGAAAGTGATGTCATGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCAGACTAGCCTAACACTGCTTTCCTAATTAGAAAGTGATGTCATGA  550

seq1  AAACTTTGGCAAAGCCTGTGAATTCAGTACAAACAACATGTTGCCTCTGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTTTGGCAAAGCCTGTGAATTCAGTACAAACAACATGTTGCCTCTGA  600

seq1  AATCAGCATGCATAAAAAGGCCTTTAGCGAAGGTTCAGGTTCAGATATGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAGCATGCATAAAAAGGCCTTTAGCGAAGGTTCAGGTTCAGATATGT  650

seq1  GAAACCACTTCAAGGCAAGGTTAAGAGAAGAGTAGCATCACAATATGGCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACCACTTCAAGGCAAGGTTAAGAGAAGAGTAGCATCACAATATGGCT  700

seq1  GTTCTCCACAAATAGATATTTCAGACTGGCATCAGACATCAAACTCTGAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTCCACAAATAGATATTTCAGACTGGCATCAGACATCAAACTCTGAA  750

seq1  AATTAACAACAGTTAAACCTGCTCCCATTTGCCACTCTCATCTGCAACCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAACAACAGTTAAACCTGCTCCCATTTGCCACTCTCATCTGCAACCC  800

seq1  ACCCTGTTCAGTGGAAAGCAAAGCTCACTAGAGACCTTTGATTTGAAACT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTGTTCAGTGGAAAGCAAAGCTCACTAGAGACCTTTGATTTGAAACT  850

seq1  CCCCATTTTGCTAAAAACAGATAGCAAATGTCTGTTCTTGTAATGTATAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCATTTTGCTAAAAACAGATAGCAAATGTCTGTTCTTGTAATGTATAC  900

seq1  AACACCTTGTTTTTCTGATGGTAGAAAGATTTCTAATCCTATCTTAGAGA  950
      ||||||||| |||||||||||||| |||||||||||||||||||||||||
seq2  AACACCTTG-TTTTCTGATGGTAG-AAGATTTCTAATCCTATCTTAGAGA  948

seq1  TACCAGCTTATTCATGTTCATGGCTGCTCTACTCACAAACAAGAAAATAA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||  ||
seq2  TACCAGCTTATTCATGTTCATGGCTGCTCTACTCACAAACAAGAAATAAA  998

seq1  AAACAGCTTAAAAATTGATCTGATGAATGGATAAT-AAAAAAATGTAGGC  1049
      ||||||||  |||| |||||||||| ||||||||| ||||||||||||||
seq2  AAACAGCT--AAAAATGATCTGATG-ATGGATAATAAAAAAAATGTAGGC  1045

seq1  TCTTTCTAATTTTCTTTTTACTTATTCACTTTACATCCTGCTAACTTCCC  1099
      || |||||||||   ||||||||| ||||||||||| ||||||||| |||
seq2  TC-TTCTAATTT--CTTTTACTTA-TCACTTTACAT-CTGCTAACTACCC  1090

seq1  TCTCCC-GGTCACTCTTCCTACAATCGTTCCCACACACTCCCCTCCCTTT  1148
       ||||| |||| ||||||||||||||| |||||||||||  |||||   |
seq2  -CTCCCGGGTCCCTCTTCCTACAATCG-TCCCACACACT--CCTCC---T  1133

seq1  CCCCTCT-GAGAGGGTGTGGGATCCCTGGGTACCCCCCACTCTG  1191
       |||||| || ||||||| ||||||   ||||   |||||||||
seq2  ACCCTCTGGAAAGGGTGT-GGATCC--TGGTA---CCCACTCTG  1171