BAC Information

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BAC

Clone NameB6Ng01-005F14
Chromosome3 (Build37)
Map Location 145,541,977 - 145,542,348
singlet/doubletsinglet
Overlap geneDdah1, LOC100040331
Upstream geneEG622139, AI747448, Clca6, Clca3, Clca5, Odf2l, Col24a1, 2410019A14Rik, Cyr61
Downstream geneBcl10, 2410004B18Rik, Syde2, Wdr63, Mcoln3, Mcoln2, Edg7, Ssx2ip, Ctbs, Spata1, Gng5, Bxdc5, LOC100040473, Dnase2b, Uox, 4930503B20Rik, Gm1652, LOC670100, Prkacb, LOC100040540, Ttll7
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-005F14.b
ACCDH842508
length894
definitionDH842508|Mus musculus domesticus DNA, BAC clone: B6Ng01-005F14, 5' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcccaaatttattgttttgaatacctgattagtactccattgtgta
aatgtaccacattttctgtatccattcctctgttgagggacatctgagtt
ctttccaccttctggttattataaataaagctgctatgaacataatggag
catgtgtccttattacatggaggagcatattctggtatatgcccaggagt
tgtatagctgggtccccaggtaaaactttatccaattttctgaggaaccg
ccaaattgttttccacaatggttggaccaccttgcaatcccaccaaaaat
ggaggagtggtcctctttcaccgcatcctcaccattatctgcttttacct
gagttttttatcttaaccattctgactggtgtgaggtagaatctcagggt
tattttgatttgcatttccctgatgactatggatgttgaacatttcttta
ggtgcttcacagccattcagtattcctcaaatgaaaattctttgtttagt
tctgtaccccattttttaaaggtcaagattttattgtcttcattacaaaa
tctgcttagaaatggatcacgtggccctttctcttcttgtcgcctcccaa
ttcaaaatgcttgcatctcttaatagccagacctcttagatctgcagttg
ggctcaacacactccagtctcagcacaatcttctttgtagttttagcctt
ttttgcggaaaaaaggcttagtctgcccaccatacccactctgtttcctg
tcataacaccgctttccctgggcatacaaagaatccttgcccttcttgta
ctgtgtcaccttgtggggttggtacttcccacatcttcttgcagaatgtc
tggcgggttttaggtacattcaccatgtgtcgcaccagctccta
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_145541977_145542348
seq2: B6Ng01-005F14.b_556_928 (reverse)

seq1  TGCGA-ACATGGTGAACGTGCCTAAAACCCGCCGGACATTCTGCAAGAA-  48
      ||||| |||||||||| || ||||||||||||| ||||||||||||||| 
seq2  TGCGACACATGGTGAATGTACCTAAAACCCGCCAGACATTCTGCAAGAAG  50

seq1  ATGTGGGAAGCACCAACCCCACAAGGTGACACAGTACAAGAAGGGCAAGG  98
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  ATGTGGGAAGTACCAACCCCACAAGGTGACACAGTACAAGAAGGGCAAGG  100

seq1  ATTCTTTGTATGCCCAGGGAAAGCGGCGTTACGACAGGAAACAGAGTGGC  148
      |||||||||||||||||||||||||| |||| ||||||||||||||||| 
seq2  ATTCTTTGTATGCCCAGGGAAAGCGGTGTTATGACAGGAAACAGAGTGGG  150

seq1  TATGGTGGGCAGACTAAGCCTATTTTCCGC-AAAAAGGCTAAAACTACAA  197
      ||||||||||||||||||||| |||||||| |||||||||||||||||||
seq2  TATGGTGGGCAGACTAAGCCTTTTTTCCGCAAAAAAGGCTAAAACTACAA  200

seq1  AGAAGATTGTGCTGAGACTGGAGTGCGTTGAGCCCAACTGCAGATCTAAG  247
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  AGAAGATTGTGCTGAGACTGGAGTGTGTTGAGCCCAACTGCAGATCTAAG  250

seq1  AGGATGCTGGCTATTAAGAGATGCAAGCATTTTGAATTGGGAGGCGACAA  297
      |||   ||||||||||||||||||||||||||||||||||||||||||||
seq2  AGG--TCTGGCTATTAAGAGATGCAAGCATTTTGAATTGGGAGGCGACAA  298

seq1  GAAGAGAAAGGGCCAAGTGATCCAGTTCTAAGCAGATTTTGTTATGAAGA  347
      ||||||||||||||| |||||||| ||||||||||||||||| |||||||
seq2  GAAGAGAAAGGGCCACGTGATCCATTTCTAAGCAGATTTTGTAATGAAGA  348

seq1  CAATAAAATCTTGACCTTTCAAAAA  372
      ||||||||||||||||||| |||||
seq2  CAATAAAATCTTGACCTTTAAAAAA  373