BAC Information

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BAC

Clone NameB6Ng01-006B21
Chromosome3 (Build37)
Map Location 29,904,149 - 30,020,008
singlet/doubletdoublet
Overlap genenone
Upstream gene6130401L20Rik, LOC100040676, Evi1
Downstream geneMds1, LOC100040727, LOC100040734, LOC100040749, Arpm1, Mynn, Lrrc34, 4930558O21Rik, E230002P03Rik, Samd7, Tloc1, Gpr160, Phc3, LOC100040809, Prkci, Skil
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-006B21.bB6Ng01-006B21.g
ACCDH843067DH843068
length3901,122
definitionDH843067|Mus musculus domesticus DNA, BAC clone: B6Ng01-006B21, 5' end.DH843068|Mus musculus domesticus DNA, BAC clone: B6Ng01-006B21, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(30,019,613 - 30,020,008)(29,904,149 - 29,905,298)
sequence
ccatttacgggccccttatgagtcagtttctctggtgcatgatcttcgtg
ctggctgtctctctggaagtgtgtcatcacgttcttcgtgtttgctcagc
tccagctttgctgcacaaggactttcttttccagagaatcagtatccctg
cctcgtgaaaatctggaaatggctctaggcctgctctgcaagtactagga
tgctgggaagtcacagatcctggcctcaatctctacatcagcaaaatcat
gacaagtgggtaccagaaagtgggagcacgaaatctagatacactctccc
atctttcctgcctgttcatcatttctcattactgaattactgccacatag
acccccttgctctactgtgtatgatggggggagagaggga
gaattctgccttcgtattctttgtggggcacacattcttctatatctcgt
tgcttcagaatggacaacaggcattgggtaatctcttattaacgtgtttc
ttttgattgagaggcaacagtagacttctctcattctaaataccagctga
caggagccagtttaaaaatgaaagtacttatcactttgggtaaatgacaa
ggttaacaataccttggctgcctgagagctttcctacatttgaggaccat
gtgagggcaggagagaattcaaatgactatgttcctttccatgatgcaga
atcctaatacacacacacacacacacacacacacacacacacacacacac
acacacacacacagacagacaaaacatcctacagaatatgcctaggtcat
tctgatcaccataatagaaagactggcttggttttcatctgaaagatcaa
cttatgtgtactgagtattaatggcctctctcagggaaattcaaagagtc
tgagttttcgggggtgggggggaagaaagatgcttcagggtaaaaaaaaa
aaagtacacaaaacttgtggctatattcaacgatgataagaaaagcattg
cttgtggacaataataccctgtaggtaggcatgcctttgattttaggtaa
agaatatagaaaggtaagattaagaggagatttatcaaggatggagagag
atgcacaggtaagatgagaccagtctaaagaaatgtgctacttattccaa
tcaaactggtttgtaaaggggagctatgtaagacttcaagagaaaggtat
tatcataacaagaaattttaaaagcctgagcaaatcattagatgtctgga
ctatttgactttactatgtagtaatgggaggagctcctggagataaagaa
aatctctgaacattgataaagctcttcagtgtcctttctgtgttggtccc
ttgaggactgaggttggacacttcagtatcacttaactctgcttgctgct
gccccgcctactgctcagacagttgcttgctctgtagcaccagctctcta
atgtggtccacccattgttgtcctggagatgtccaggctcaatctggggt
cagcgtgagcctatgtggctgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_30019613_30020008
seq2: B6Ng01-006B21.b_48_443 (reverse)

seq1  TCCCTCTCTCCCCCCATCATACACAGTAGAGCAAGGGGGTCTATGTGGCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTCTCTCCCCCCATCATACACAGTAGAGCAAGGGGGTCTATGTGGCA  50

seq1  GTAATTCAGTAATGAGAAATGATGAACAGGCAGGAAAGATGGGAGAGTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATTCAGTAATGAGAAATGATGAACAGGCAGGAAAGATGGGAGAGTGT  100

seq1  ATCTAGATTTCGTGCTCCCACTTTCTGGTACCCACTTGTCATGATTTTGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAGATTTCGTGCTCCCACTTTCTGGTACCCACTTGTCATGATTTTGC  150

seq1  TGATGTAGAGATTGAGGCCAGGATCTGTGACTTCCCAGCATCCTAGTACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGTAGAGATTGAGGCCAGGATCTGTGACTTCCCAGCATCCTAGTACT  200

seq1  TGCAGAGCAGGCCTAGAGCCATTTCCAGATTTTCACGAGGCAGGGATACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGAGCAGGCCTAGAGCCATTTCCAGATTTTCACGAGGCAGGGATACT  250

seq1  GATTCTCTGGAAAAGAAAGTCCTTGTGCAGCAAAGCTGGAGCTGAGCAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCTCTGGAAAAGAAAGTCCTTGTGCAGCAAAGCTGGAGCTGAGCAAA  300

seq1  CACGAAGAACGTGATGACACACTTCCAGAGAGACAGCCAGCACGAAGATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGAAGAACGTGATGACACACTTCCAGAGAGACAGCCAGCACGAAGATC  350

seq1  ATGCACCAGAGAAACTGACTCATAAGGGGCCCGTAAATGGGAATTC  396
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCACCAGAGAAACTGACTCATAAGGGGCCCGTAAATGGGAATTC  396

seq1: chr3_29904149_29905298
seq2: B6Ng01-006B21.g_64_1185

seq1  GAATTCTGCCTTCGTATTCTTTGTGGGGCACACATTCTTCTATATCTCGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGCCTTCGTATTCTTTGTGGGGCACACATTCTTCTATATCTCGT  50

seq1  TGCTTCAGAATGGACAACAGGCATTGGGTAATCTCTTATTAACGTGTTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTCAGAATGGACAACAGGCATTGGGTAATCTCTTATTAACGTGTTTC  100

seq1  TTTTGATTGAGAGGCAACAGTAGACTTCTCTCATTCTAAATACCAGCTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGATTGAGAGGCAACAGTAGACTTCTCTCATTCTAAATACCAGCTGA  150

seq1  CAGGAGCCAGTTTAAAAATGAAAGTACTTATCACTTTGGGTAAATGACAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAGCCAGTTTAAAAATGAAAGTACTTATCACTTTGGGTAAATGACAA  200

seq1  GGTTAACAATACCTTGGCTGCCTGAGAGCTTTCCTACATTTGAGGACCAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTAACAATACCTTGGCTGCCTGAGAGCTTTCCTACATTTGAGGACCAT  250

seq1  GTGAGGGCAGGAGAGAATTCAAATGACTATGTTCCTTTCCATGATGCAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGGGCAGGAGAGAATTCAAATGACTATGTTCCTTTCCATGATGCAGA  300

seq1  ATCCTAATACACACACACACACACACACACACACACACACACACACACAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTAATACACACACACACACACACACACACACACACACACACACACAC  350

seq1  ACACACACACACAGACAGACAAAACATCCTACAGAATATGCCTAGGTCAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACAGACAGACAAAACATCCTACAGAATATGCCTAGGTCAT  400

seq1  TCTGATCACCATAATAGAAAGACTGGCTTGGTTTTCATCTGAAAGATCAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGATCACCATAATAGAAAGACTGGCTTGGTTTTCATCTGAAAGATCAA  450

seq1  CTTATGTGTACTGAGTATTAATGGCCTCTCTCAGGGAAATTCAAAGAGTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATGTGTACTGAGTATTAATGGCCTCTCTCAGGGAAATTCAAAGAGTC  500

seq1  TGAGTTTTCGGGGGTGGGGGGGAAGAAAGATGCTTCAGGGTAAAAAAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTTTTCGGGGGTGGGGGGGAAGAAAGATGCTTCAGGGTAAAAAAAAA  550

seq1  AAAGTACACAAAACTTGTGGCTATATTCAACGATGATAAGAAAAGCATTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTACACAAAACTTGTGGCTATATTCAACGATGATAAGAAAAGCATTG  600

seq1  CTTGTGGACAATAATACCCTGTAGGTAGGCATGCCTTTGATTTTAGGTAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTGGACAATAATACCCTGTAGGTAGGCATGCCTTTGATTTTAGGTAA  650

seq1  AGAATATAGAAAGGTAAGATTAAGAGGAGATTTATCAAGGATGGAGAGAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATATAGAAAGGTAAGATTAAGAGGAGATTTATCAAGGATGGAGAGAG  700

seq1  ATGCACAGGTAAGATGAGACCAAGTCTAAAGAAATGTGCTACTTATTCCA  750
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  ATGCACAGGTAAGATGAGACC-AGTCTAAAGAAATGTGCTACTTATTCCA  749

seq1  ATCAAACTGGTTTGTAAAGGGGAGCTATGTAAGACTTCAAGAGAAAGGTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAACTGGTTTGTAAAGGGGAGCTATGTAAGACTTCAAGAGAAAGGTA  799

seq1  TTATCATAACAAGAAATTTTAAAAGCCTGAGCAAATCATTAGATGTCTGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCATAACAAGAAATTTTAAAAGCCTGAGCAAATCATTAGATGTCTGG  849

seq1  ACTATTTGACTTTAACTATGTAGTAATGGGAGGAGCTCCTGGAGATAAAG  900
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  ACTATTTGACTTT-ACTATGTAGTAATGGGAGGAGCTCCTGGAGATAAAG  898

seq1  AAAAATCTCTGAACAATTGATAAAGCTCTTTCAGGTGTCCTTTCTGTGTT  950
       ||||||||||||| ||||||||||||| |||| |||||||||||||| |
seq2  -AAAATCTCTGAAC-ATTGATAAAGCTC-TTCA-GTGTCCTTTCTGTG-T  943

seq1  TGGTCCCCTTGAGGACTGAGGTTGGGACAACTTCCAGTATCCAACTTAAC  1000
      |||| |||||||||||||||||| |||| |||| |||||||  |||||||
seq2  TGGT-CCCTTGAGGACTGAGGTT-GGAC-ACTT-CAGTATC--ACTTAAC  987

seq1  TCCTGCCTTTGCTGCTGCCCCGCCCTACTGCTCAGAACCAGTTGCTGCTT  1050
      | ||||  |||||||||||||| |||||||||||||  ||||||||   |
seq2  T-CTGC--TTGCTGCTGCCCCG-CCTACTGCTCAGA--CAGTTGCTTGCT  1031

seq1  CTGTAAGCCACCCAAGCTCTCTAATGT-GTCCACTCATTGTCTGTCACTG  1099
      |||||   ||||  ||||||||||||| |||||| |||||| ||||    
seq2  CTGTA--GCACC--AGCTCTCTAATGTGGTCCACCCATTGT-TGTC---C  1073

seq1  TGAAGATGTCCCAGCTCAATACTGGGTGTCAGCAGTGAAGCTATGT-GCT  1148
      || ||||||||  ||||||| ||||| |||||| ||||  |||||| |||
seq2  TGGAGATGTCCAGGCTCAAT-CTGGG-GTCAGC-GTGAGCCTATGTGGCT  1120

seq1  GT  1150
      ||
seq2  GT  1122