BAC Information

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BAC

Clone NameB6Ng01-006E15
Chromosome3 (Build37)
Map Location 28,487,641 - 28,488,696
singlet/doubletsinglet
Overlap geneTnik
Upstream geneFndc3b, E030011K20Rik, Pld1
Downstream geneSlc2a2, EG624446, Eif5a2, Rpl22l1, Gm1527, 6130401L20Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-006E15.bB6Ng01-006E15.g
ACCDH843191DH843192
length1,0391,132
definitionDH843191|Mus musculus domesticus DNA, BAC clone: B6Ng01-006E15, 5' end.DH843192|Mus musculus domesticus DNA, BAC clone: B6Ng01-006E15, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccttaaaattcaaaattctgttagttcttaatagagtcttcatgg
tttttcctggttggggaattaacatgttctctggattaatacaatcatta
ccttattttagtgtaggttagtgctttttcttacaccaatgagagaagta
tacttgctagtttttctattactgtggcaacatacctgataaaagcaagc
aaggaaggaaggaaggaaggaagctgggtcaggaagcagagatgaaagtt
cagcttgccttctcctttcatctgtctctttatctagtctggaccgctgg
cccaggggatgttatcaccctcctcagctaatcctctctgtagacagtct
cagacacaaccagaggtatgcttcctagataattctaaatccagtcaaat
tgacaaggacaggtggggttcggttctgatcctctgcttgttcctccagt
taggacactcctaggaggatgttgtttttaagtaaactggttagttgatt
ttaatgaagacatattaaagttagcaatctttgtgtttttgctagaggtc
acctcttaaacaacagacttctcacagttgtggatataaattgtcactct
tgggcatggtcattacagaacgcaccttctctgatggacaacttgggtct
ttactgtttgtctttccctcctttgttgggtgctaggaagcccagagcca
tactgatggctatatctgctgtctatactccctgaatgtcaacttatatg
ggtatgttaggaatcaacccagcttctgctttcaactcatgttcctcttc
tatttcatgttcctttttagtttattttctttttctttttaaaatttttt
attaggtattttcctcatttacatttccaatgctatcccaaaagtcccct
atacctcccccaactccctacctacccactccacttttggccctggcgtc
cctgtactggggcaataaagtttgcaagtcccctttagttattttctata
caataaagtttcgttgtgtagactgctataaacccatta
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtgagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagaagccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaaactggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagagcatcatcctgagtgaggtaacacaatcacaaa
ggaactcacacaatatgtactcactgataagtggatactagcccaaaacc
taggatacccacgatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccatggaaaggagttacagaaacaaagtttggagctgagatg
aaaggatggaccatgtagagactgccatatccagggatccaccccataat
cagcatccaaacgctgacaccattgcatatactagcaagattttatcgaa
aggacccagatgtagctgtctcttgtgagactatgccggggtctagcaaa
cacagaagtggatgctcacagtcagctaatggatggatcacaggctccca
tggagagctagagaagtatccacgagctaaagggatctcaccctataggt
ggaaaaacattatggactacagtacccctgactctgactctagctgccta
tgtcaaagatgctagtcgcatcactgaagaagcattgaccccgacttgtg
ggccgtacaggacgctcaggctaggggggaat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_28487641_28488696
seq2: B6Ng01-006E15.b_44_1082 (reverse)

seq1  TAATGGGGTTTATAGCAGATACTACAACAACTAAAACTATAATGTATAAG  50
      |||| |||||||||||||   |||| |||||  ||||| || ||||| ||
seq2  TAAT-GGGTTTATAGCAG--TCTAC-ACAAC-GAAACTTTATTGTAT-AG  44

seq1  AAAATAAACTAAAAAGGGGACTTGCAAACTTTATATGCCCCAGTACAGGG  100
      ||||| ||||  |||||||||||||||||||||| |||||||||||||||
seq2  AAAAT-AACT--AAAGGGGACTTGCAAACTTTAT-TGCCCCAGTACAGGG  90

seq1  GAACGCCAGGGCCAAAAAGTGGGAGTGGGTAGGTAGGGGAGTTGGGGGGA  150
        ||||||||||| |||||| |||||||||||||| ||||||||||||  
seq2  --ACGCCAGGGCC-AAAAGT-GGAGTGGGTAGGTA-GGGAGTTGGGGG--  133

seq1  GGGTATAGGGGACTTTTGGGATAGCATTGGAAATGTAAATGAGGAAAATA  200
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTATAGGGGACTTTTGGGATAGCATTGGAAATGTAAATGAGGAAAATA  183

seq1  CCTAATAAAAAATTTTAAAAAGAAAAAGAAAATAAACTAAAAAGGAACAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAATAAAAAATTTTAAAAAGAAAAAGAAAATAAACTAAAAAGGAACAT  233

seq1  GAAATAGAAGAGGAACATGAGTTGAAAGCAGAAGCTGGGTTGATTCCTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATAGAAGAGGAACATGAGTTGAAAGCAGAAGCTGGGTTGATTCCTAA  283

seq1  CATACCCATATAAGTTGACATTCAGGGAGTATAGACAGCAGATATAGCCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACCCATATAAGTTGACATTCAGGGAGTATAGACAGCAGATATAGCCA  333

seq1  TCAGTATGGCTCTGGGCTTCCTAGCACCCAACAAAGGAGGGAAAGACAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTATGGCTCTGGGCTTCCTAGCACCCAACAAAGGAGGGAAAGACAAA  383

seq1  CAGTAAAGACCCAAGTTGTCCATCAGAGAAGGTGCGTTCTGTAATGACCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTAAAGACCCAAGTTGTCCATCAGAGAAGGTGCGTTCTGTAATGACCA  433

seq1  TGCCCAAGAGTGACAATTTATATCCACAACTGTGAGAAGTCTGTTGTTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCAAGAGTGACAATTTATATCCACAACTGTGAGAAGTCTGTTGTTTA  483

seq1  AGAGGTGACCTCTAGCAAAAACACAAAGATTGCTAACTTTAATATGTCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGTGACCTCTAGCAAAAACACAAAGATTGCTAACTTTAATATGTCTT  533

seq1  CATTAAAATCAACTAACCAGTTTACTTAAAAACAACATCCTCCTAGGAGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAAAATCAACTAACCAGTTTACTTAAAAACAACATCCTCCTAGGAGT  583

seq1  GTCCTAACTGGAGGAACAAGCAGAGGATCAGAACCGAACCCCACCTGTCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTAACTGGAGGAACAAGCAGAGGATCAGAACCGAACCCCACCTGTCC  633

seq1  TTGTCAATTTGACTGGATTTAGAATTATCTAGGAAGCATACCTCTGGTTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCAATTTGACTGGATTTAGAATTATCTAGGAAGCATACCTCTGGTTG  683

seq1  TGTCTGAGACTGTCTACAGAGAGGATTAGCTGAGGAGGGTGATAACATCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTGAGACTGTCTACAGAGAGGATTAGCTGAGGAGGGTGATAACATCC  733

seq1  CCTGGGCCAGCGGTCCAGACTAGATAAAGAGACAGATGAAAGGAGAAGGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGGCCAGCGGTCCAGACTAGATAAAGAGACAGATGAAAGGAGAAGGC  783

seq1  AAGCTGAACTTTCATCTCTGCTTCCTGACCCAGCTTCCTTCCTTCCTTCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTGAACTTTCATCTCTGCTTCCTGACCCAGCTTCCTTCCTTCCTTCC  833

seq1  TTCCTTGCTTGCTTTTATCAGGTATGTTGCCACAGTAATAGAAAAACTAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTGCTTGCTTTTATCAGGTATGTTGCCACAGTAATAGAAAAACTAG  883

seq1  CAAGTATACTTCTCTCATTGGTGTAAGAAAAAGCACTAACCTACACTAAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTATACTTCTCTCATTGGTGTAAGAAAAAGCACTAACCTACACTAAA  933

seq1  ATAAGGTAATGATTGTATTAATCCAGAGAACATGTTAATTCCCCAACCAG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGGTAATGATTGTATTAATCCAGAGAACATGTTAATTCCCCAACCAG  983

seq1  GAAAAACCATGAAGACTCTATTAAGAACTAACAGAATTTTGAATTTTAAG  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAACCATGAAGACTCTATTAAGAACTAACAGAATTTTGAATTTTAAG  1033

seq1  GAATTC  1056
      ||||||
seq2  GAATTC  1039