BAC Information

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BAC

Clone NameB6Ng01-006F07
Chromosome3 (Build37)
Map Location 15,693,545 - 15,694,566
singlet/doubletsinglet
Overlap genenone
Upstream geneEG545507, Car1, LOC100041785, Car3, Car2, EG634323, LOC100039985, LOC751864, Sirpb1, LOC668101
Downstream geneLOC100038947, LOC622425, LOC664795, LOC381484, Ythdf3, LOC100040034
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-006F07.bB6Ng01-006F07.g
ACCDH843223DH843224
length1,2681,003
definitionDH843223|Mus musculus domesticus DNA, BAC clone: B6Ng01-006F07, 5' end.DH843224|Mus musculus domesticus DNA, BAC clone: B6Ng01-006F07, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttaatctacttatatcatatccatgtgtctcagccttggatta
tcttttttcttaaatttactctcttatatattacatctacatcaagtttt
cccttccttcctctcctcttagtacctccccctccctcatatcactatat
atttctttcattcccagaagaaaacactaggactcctaggatatcgacca
aacatggcataaaaaattagactcccctctcatactaaggtcagataatg
catcagagtaggtggaatagtgtctctaatccatgaaaaaaacatcagaa
atatcacccagtcaatttgataggagcttcacaaaaacagtaatttatgc
tattataacatacatacagagggcatttgttggacctatgcatgctcctc
cagtcagttcagactttgtgagcttttatgaacagaagttccttggttct
gtgggttttctgtggtgtccaagacacttatggatctttcaatgactacc
ccccaactcatcaaaattccctgagctctgcctagtggttggctgtgggt
ttctgcatgtttccatcagttgctggaagaaggatttctaatgacaactg
tgtactcatcagttatatttccctttcttggtatggattaattaattctg
gaatagtttttaactttccatccctttgatttcaaatttcataatatcat
tttctttaagagctgactaacacttcattgtataactaccatatttcctc
aatccattctttggttgagggacatctaggtcctttacagtttcttgtta
ttatgactgaagctgctatcaataaagttgggcaaatgtctttgtggtag
gataaagtatccattgagtgcatggtcaggagtggtgtagctggatcttg
aggtagattgagtcccaaatttatgcggaactttgatactgatttccaat
gtggctgtacaagtttgaacttccaccagaaactgaggaatattcccttt
gctctacatcctaaccaacataattaatttgtttggttggttggttaatg
gttattaattaatgaataagaagatatactggtctctgtctcggacacaa
acagaaaagggcaattgattccatttccggatgtggtgagcttcatcagg
tactgggcagttactctgagccttaaaagaagagtcagtcctgaactgga
cactcctagactgccgcttgagtttgatttaccctctctctgacatggtg
tgtgagagacagaagtca
gaattctccctgtccctgccagtataaacaagcctttccctgccattgta
aatgagttcaagactacccagaccctacccgtctgagggcactcactaac
agtcaacatgactacaactgccagagcaagagtagctgctctcaaaaatt
agccataaaaaatagcaatccctggaaccccagcctcagtttgaatttga
agataaaccgacattgatgacaaagtttctgacacaccaatagctgacca
tcaaaagtaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaat
aactgttactttgctagctaataataataaagttgtgtagcctccccccg
ccccaaaaaaagagtattaaaataaactgtactgttagtaatcgggtttg
actttctctgtgaggctgagcaaccccatgcacattggaacaaaaacctc
ttgccattgcagcaatctattgtcaagctgtgtttctgggggtcatgttc
tcaacatctgggtccctgggggtcataacaccttcactccacaggtcaag
gaaccaatgtgagaattctgccagcttctaagtatatctatccgtattat
acattctgtaactgggaaaatgaccacagggtaagtttgagtacctatta
gaactactatgagttagtcattggccaaaatgtcattaatgaccatagat
ccatacacccctactttaactggagggcaataatgttttttggggatctc
ctgggatcaacgtcaattcagaagcagtatccaatagaccctagaacatc
tgattatttattttcccctggtgtacagtaacccttgtaaagatcacagt
tttctttggggagactagagatggcccaacacaactttaggtgtcttgta
aaatccattatcagtggacttggccacagcatcattcagttgatctgggt
ttgcaactgctcagtatgaaaagtgatcactgacaaattacttttgcatg
atc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_15693545_15694566
seq2: B6Ng01-006F07.g_68_1070

seq1  GAATTCTCCCTGTCCCTGCCAGTATAAACAAGCCTTTCCCTGCCATTGTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCCTGTCCCTGCCAGTATAAACAAGCCTTTCCCTGCCATTGTA  50

seq1  AATGAGTTCAAGACTACCCAGACCCTACCCGTCTGAGGGCACTCACTAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAGTTCAAGACTACCCAGACCCTACCCGTCTGAGGGCACTCACTAAC  100

seq1  AGTCAACATGACTACAACTGCCAGAGCAAGAGTAGCTGCTCTCAAAAATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAACATGACTACAACTGCCAGAGCAAGAGTAGCTGCTCTCAAAAATT  150

seq1  AGCCATAAAAAATAGCAATCCCTGGAACCCCAGCCTCAGTTTGAATTTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCATAAAAAATAGCAATCCCTGGAACCCCAGCCTCAGTTTGAATTTGA  200

seq1  AGATAAACCGACATTGATGACAAAGTTTCTGACACACCAATAGCTGACCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAAACCGACATTGATGACAAAGTTTCTGACACACCAATAGCTGACCA  250

seq1  TCAAAAGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAAGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAT  300

seq1  AACTGTTACTTTGCTAGCTAATAATAATAAAGTTGTGTAGCCTCCCCCCG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGTTACTTTGCTAGCTAATAATAATAAAGTTGTGTAGCCTCCCCCCG  350

seq1  CCCCAAAAAAAGAGTATTAAAATAAACTGTACTGTTAGTAATCGGGTTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCAAAAAAAGAGTATTAAAATAAACTGTACTGTTAGTAATCGGGTTTG  400

seq1  ACTTTCTCTGTGAGGCTGAGCAACCCCATGCACATTGGAACAAAAACCTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTCTCTGTGAGGCTGAGCAACCCCATGCACATTGGAACAAAAACCTC  450

seq1  TTGCCATTGCAGCAATCTATTGTCAAGCTGTGTTTCTGGGGGTCATGTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCATTGCAGCAATCTATTGTCAAGCTGTGTTTCTGGGGGTCATGTTC  500

seq1  TCAACATCTGGGTCCCTGGGGGTCATAACACCTTCACTCCACAGGTCAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACATCTGGGTCCCTGGGGGTCATAACACCTTCACTCCACAGGTCAAG  550

seq1  GAACCAATGTGAGAATTCTGCCAGCTTCTAAGTATATCTATCCGTATTAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCAATGTGAGAATTCTGCCAGCTTCTAAGTATATCTATCCGTATTAT  600

seq1  ACATTCTGTAACTGGGAAAATGACCACAGGGTAAGTTTGAGTACCTATTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTCTGTAACTGGGAAAATGACCACAGGGTAAGTTTGAGTACCTATTA  650

seq1  GAACTACTATGAGTTAGTCATTGGCCAAAATGTCATTAATGACCATAGAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTACTATGAGTTAGTCATTGGCCAAAATGTCATTAATGACCATAGAT  700

seq1  CCATACACCCCTACTTTAACTGGAGGGCAATAATGTTTTTTGGGGATCTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATACACCCCTACTTTAACTGGAGGGCAATAATGTTTTTTGGGGATCTC  750

seq1  CTGGGATCAACGTCAATTCAGAAGCAGTATCCAATAGACCCTAGAACATC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGATCAACGTCAATTCAGAAGCAGTATCCAATAGACCCTAGAACATC  800

seq1  TGATTATTTATTTTCCCCTGGTGTACAGTTAACCTTGTAAAAGATCACAG  850
      ||||||||||||||||||||||||||||| | |||||| |||||||||||
seq2  TGATTATTTATTTTCCCCTGGTGTACAGTAACCCTTGT-AAAGATCACAG  849

seq1  GTTTCTTTGGGGAAGAACTAGAGAATGGCCAACAACAAAACTTTTAGGTG  900
       ||||||||||||   ||||||| ||||||  ||||| ||| ||||||||
seq2  TTTTCTTTGGGGA--GACTAGAG-ATGGCC--CAACACAAC-TTTAGGTG  893

seq1  TCTTGTTAAAATCCATTATCAGTGGAACTTGGCCACAGCATCATTCAAGC  950
      ||||| ||||||||||||||||||| |||||||||||||||||||||   
seq2  TCTTG-TAAAATCCATTATCAGTGG-ACTTGGCCACAGCATCATTCA--G  939

seq1  TGGATCTGGGTTTGCAAACTGGCTCCAGTATGAAAAGTGATTCACTGACC  1000
      | ||||||||||||| |||| ||| ||||||||||||||| |||||||| 
seq2  TTGATCTGGGTTTGC-AACT-GCT-CAGTATGAAAAGTGA-TCACTGAC-  984

seq1  AAAATTACTTTTTGCAATGATC  1022
       ||||||| |||||| ||||||
seq2  -AAATTAC-TTTTGC-ATGATC  1003