BAC Information

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BAC

Clone NameB6Ng01-006H15
Chromosome3 (Build37)
Map Location 33,191,448 - 33,192,463
singlet/doubletsinglet
Overlap genenone
Upstream geneZmat3, 4930429B21Rik, Pik3ca, Kcnmb3, Zfp639, Mfn1, Gnb4, LOC100040977, Actl6a, Mrpl47, Ndufb5, Usp13, Pex2
Downstream geneEG545512, LOC100041058, Ttc14, Ccdc39, LOC100040232, LOC100041072, Fxr1h, Dnajc19, LOC435727, EG665636
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-006H15.bB6Ng01-006H15.g
ACCDH843325DH843326
length1,2441,005
definitionDH843325|Mus musculus domesticus DNA, BAC clone: B6Ng01-006H15, 5' end.DH843326|Mus musculus domesticus DNA, BAC clone: B6Ng01-006H15, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttcatgtagggttgaagccttgtaagccttcccctttccattgt
taccatgaccattgctgttctaattgttcaggtctgtttaggcagctata
ctgatgaaacatcataggtataggtatagcctctctgacaattctaggag
acacaatctcatagcaaatgtcttgtttatatgtctcctacaccttccac
aatgatcactgagccttaggtgcaggagttctgttgtagatgtatttatt
aattggaactgagacattatgcctacatcctcttctgcctctttatctta
tagggtagtgaaacttcgagcagtttcagtgtgtcaggtttcacatttca
gtctttgtagttagctttttgaacaaggtgatagataaaggtctaatttc
attcttctgcgtatgaacacctcatcaattcactacatcagagccctcac
accataaccacacataaacccagaggcgtgcttctctcctcttttatgtt
tttgtaacccaccctgtgatggtttgtatattcttggaccagggagtggc
accatttggaggtgtggccttgttggaataggtgtgacctggttggagta
ggtgtgtcactgtgggtgtgggcttaggactctcaccccagttgcctgga
agtcagtcttccactagcagcctttggatgaagacatagaactctaagct
ctgcctgcgccatgacagcctggatgctgccatgctcccaccttgatgat
aatggactgaacctctgaacctgtaagctagccccaattaagtgtttttt
tttaaaggacttgccttggtcatggtgtctattcacagcagtaaaaccct
aagacacaccccaaataacactcaaggttaacctgcttgggaactgtgtc
atacgcatactaacataaacagatttatccctgtataggctaagaaacca
ggtttacttcctgtttaacctttgcctgaaattaatgggaaaataacaat
cagagacccagcagcacagcttttcagaaaagcataaaggaaaaaaaagt
gggcagaagcagtctaaccttccaatatctgctcacgagctgctggcttg
cctggtccaggacagggtggtacctcgtcattcttgttctcgatttgtaa
gagccacggagagtgtggtacagtatcagcctgagtatgctcagaaagga
gtgcatttcagtcttgcaatcgtgagacggattcaattggtcta
gaattctttccaacagatgatgagccttggcatctcttgactttgcttca
gcaccaaaggattgtagtctgcggtcacttaacctctatgaggaagaaga
gatgtatttgcatcttttgcagcaataaatgttttcctatagaaaaaaac
aaatgagaagaaacacatgtaattactaacagtgtttgcaaggagaggaa
atacatagatgatttgtttactattttgaaattttaatgtggacacaggt
atttttaaagatgaagtcacaaatacatctctggctgttttttttttttc
tttcagctatttgcactctctcaaaagccttgggggtgggaactatgact
gttgattgaaaggaaacccacttctgttattggccatggaaagatggatt
ctttgtgtactcttggagagggcttgagtgtgagtgtggaaggtcaaaat
ttagatttgaaaaaaaaatgaaaccttctgcagcagaaggctacattgaa
acacctaatacaagcatgctttgcctgtctgtttccaactggtgaaatta
tatgaatgagcctaagaaagctccaagagaatcacagagctaaagactgg
attgtcttcttgaaaggaagggccatggtggaggaaatgagtccttattt
ttcatttgtcctctgtcctagctacatggacattcctgagccctgcaatt
cagtgctctggaatacattccgttccacttgtggagagaatacagagggg
tgagctcatgccaggtgatggggaatgctagcttcaagctgcatactgat
tctatggggcacagggcatagaatagggtgtcaggcaaggtgaagcttgt
ttatacagacatattacaataattaggacacaagcaaaaagcaaagctca
gagaaaggactaagagagagtgtcctcaagaccagcagtgctggagcagt
ttggaataaacaaatcacctggatcaatctggactcctgtaggagtccac
tgaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_33191448_33192463
seq2: B6Ng01-006H15.g_65_1069

seq1  GAATTCTTTCCAACAGATGATGAGCCTTGGCATCTCTTGACTTTGCTTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTCCAACAGATGATGAGCCTTGGCATCTCTTGACTTTGCTTCA  50

seq1  GCACCAAAGGATTGTAGTCTGCGGTCACTTAACCTCTATGAGGAAGAAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACCAAAGGATTGTAGTCTGCGGTCACTTAACCTCTATGAGGAAGAAGA  100

seq1  GATGTATTTGCATCTTTTGCAGCAATAAATGTTTTCCTATAGAAAAAAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTATTTGCATCTTTTGCAGCAATAAATGTTTTCCTATAGAAAAAAAC  150

seq1  AAATGAGAAGAAACACATGTAATTACTAACAGTGTTTGCAAGGAGAGGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGAGAAGAAACACATGTAATTACTAACAGTGTTTGCAAGGAGAGGAA  200

seq1  ATACATAGATGATTTGTTTACTATTTTGAAATTTTAATGTGGACACAGGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACATAGATGATTTGTTTACTATTTTGAAATTTTAATGTGGACACAGGT  250

seq1  ATTTTTAAAGATGAAGTCACAAATACATCTCTGGCTGTTTTTTTTTTTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTAAAGATGAAGTCACAAATACATCTCTGGCTGTTTTTTTTTTTTC  300

seq1  TTTCAGCTATTTGCACTCTCTCAAAAGCCTTGGGGGTGGGAACTATGACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAGCTATTTGCACTCTCTCAAAAGCCTTGGGGGTGGGAACTATGACT  350

seq1  GTTGATTGAAAGGAAACCCACTTCTGTTATTGGCCATGGAAAGATGGATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGATTGAAAGGAAACCCACTTCTGTTATTGGCCATGGAAAGATGGATT  400

seq1  CTTTGTGTACTCTTGGAGAGGGCTTGAGTGTGAGTGTGGAAGGTCAAAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGTGTACTCTTGGAGAGGGCTTGAGTGTGAGTGTGGAAGGTCAAAAT  450

seq1  TTAGATTTGAAAAAAAAATGAAACCTTCTGCAGCAGAAGGCTACATTGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGATTTGAAAAAAAAATGAAACCTTCTGCAGCAGAAGGCTACATTGAA  500

seq1  ACACCTAATACAAGCATGCTTTGCCTGTCTGTTTCCAACTGGTGAAATTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCTAATACAAGCATGCTTTGCCTGTCTGTTTCCAACTGGTGAAATTA  550

seq1  TATGAATGAGCCTAAGAAAGCTCCAAGAGAATCACAGAGCTAAAGACTGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAATGAGCCTAAGAAAGCTCCAAGAGAATCACAGAGCTAAAGACTGG  600

seq1  ATTGTCTTCTTGAAAGGAAGGGCCATGGTGGAGGAAATGAGTCCTTATTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTCTTCTTGAAAGGAAGGGCCATGGTGGAGGAAATGAGTCCTTATTT  650

seq1  TTCATTTGTCCTCTGTCCTAGCTACATGGACATTCCTGAGCCCTGCAATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTTGTCCTCTGTCCTAGCTACATGGACATTCCTGAGCCCTGCAATT  700

seq1  CAGTGCTCTGGAATACATTCCGTTCCACTTGTGGAGAGAATACAGAGGGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGCTCTGGAATACATTCCGTTCCACTTGTGGAGAGAATACAGAGGGG  750

seq1  TGAGCTCATGCCAGGTGATGGGGAATGCTAGCTTCAAGCTGCATACTGAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCTCATGCCAGGTGATGGGGAATGCTAGCTTCAAGCTGCATACTGAT  800

seq1  TCTATGGGGCACAGGGCATAGAATAGGGTGTCAGGCAAGGTGAAGCTTGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATGGGGCACAGGGCATAGAATAGGGTGTCAGGCAAGGTGAAGCTTGT  850

seq1  TTATACAGACATATTACAATAATTAGGACACAAGGCAAAAAGCAAAGCTC  900
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  TTATACAGACATATTACAATAATTAGGACACAA-GCAAAAAGCAAAGCTC  899

seq1  AGAGAAAGGACTAAGAGAGAGTGGTCCCCAAGACAAGGCAGTGCTGGAGC  950
      |||||||||||||||||||||| |||| |||||| | |||||||||||||
seq2  AGAGAAAGGACTAAGAGAGAGT-GTCCTCAAGACCA-GCAGTGCTGGAGC  947

seq1  AGGTTTGGAATTAAAACAAATCAACTTGGATTCAAATCTGGACTCCTTGG  1000
      | |||||||||  ||||||||| || |||||   |||||||||||||  |
seq2  A-GTTTGGAAT--AAACAAATC-ACCTGGAT--CAATCTGGACTCCT--G  989

seq1  TAAGAGTTCACTGAGA  1016
      || |||| ||||||||
seq2  TAGGAGTCCACTGAGA  1005