BAC Information

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BAC

Clone NameB6Ng01-007C01
Chromosome3 (Build37)
Map Location 10,979,577 - 10,980,255
singlet/doubletsinglet
Overlap genenone
Upstream geneFabp5, LOC100041480, Pmp2, Fabp9, Fabp4, 1700008G05Rik, Impa1, Slc10a5, Zfand1, Chmp4c, Snx16, LOC670564
Downstream geneLOC383826, EG667978, LOC667999
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-007C01.bB6Ng01-007C01.g
ACCDH843793DH843794
length681149
definitionDH843793|Mus musculus domesticus DNA, BAC clone: B6Ng01-007C01, 5' end.DH843794|Mus musculus domesticus DNA, BAC clone: B6Ng01-007C01, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaatattaggtgtatatagttaaaatgatattataattgaaagta
tctaatatacttgtaaagtaccttatatgaaaataccttttagcattggc
tgtcttgggtactagtaatattagaagacagactaaaaccatgaaaaaaa
atacctgacattcagatatattttaaaagttaccagttgacttttggtcc
ttttatttgtgtcaaaatgtgtgtgcctcaaacttctacaaaaagctgag
atatattaattccaaggtatcccttctgcagcctagacctagtgtagacc
ctggcacttttcaaatcttcagatggggtggagctgcttgcccatctgag
gtacaggtagaaaaaagaaatctattttttttctgatgaaaagaagtaaa
agtgatggttttataatttaaaatgaatgttgaatgtttttgttgttgtt
gttgttgttgttgttgttttagcattctttgactgctgtaggaaacagca
ggctgggggagtgggggctttctgggttaggtgactgatctctgtttttc
atacctacttggatttgattctgtttttgagcactggccatcctcctgaa
aatgactgatcacattgtagaataggaagccacaggtcttttttcattct
tgcttacttgaaaattgaatcttgaattgtg
aaaaagggtaaaacacccaagagcccaaatgcggatacctcaatctcatt
tggaagggagaagaaatcaatcacagcaggagggagggaaggagcaacct
tggtgggaaaggcaacatggagggaaagagtggtggagtattgggggtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_10979577_10980255
seq2: B6Ng01-007C01.b_42_722

seq1  GAATTCAATATTAGGTGTATATAGTTAAAATGATATTATAATTGAAAGTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATATTAGGTGTATATAGTTAAAATGATATTATAATTGAAAGTA  50

seq1  TCTAATATACTTGTAAAGTACCTTATATGAAAATACCTTTTAGCATTGGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAATATACTTGTAAAGTACCTTATATGAAAATACCTTTTAGCATTGGC  100

seq1  TGTCTTGGGTACTAGTAATATTAGAAGACAGACTAAAACCATGAAAAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTTGGGTACTAGTAATATTAGAAGACAGACTAAAACCATGAAAAAAA  150

seq1  ATACCTGACATTCAGATATATTTTAAAAGTTACCAGTTGACTTTTGGTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCTGACATTCAGATATATTTTAAAAGTTACCAGTTGACTTTTGGTCC  200

seq1  TTTTATTTGTGTCAAAATGTGTGTGCCTCAAACTTCTACAAAAAGCTGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATTTGTGTCAAAATGTGTGTGCCTCAAACTTCTACAAAAAGCTGAG  250

seq1  ATATATTAATTCCAAGGTATCCCTTCTGCAGCCTAGACCTAGTGTAGACC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATTAATTCCAAGGTATCCCTTCTGCAGCCTAGACCTAGTGTAGACC  300

seq1  CTGGCACTTTTCAAATCTTCAGATGGGGTGGAGCTGCTTGCCCATCTGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCACTTTTCAAATCTTCAGATGGGGTGGAGCTGCTTGCCCATCTGAG  350

seq1  GTACAGGTAGAAAAAAGAAATCTATTTTTTTTCTGATGAAAAGAAGTAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACAGGTAGAAAAAAGAAATCTATTTTTTTTCTGATGAAAAGAAGTAAA  400

seq1  AGTGATGGTTTTATAATTTAAAATGAATGTTGAATGTTTTTGTTGTTGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGATGGTTTTATAATTTAAAATGAATGTTGAATGTTTTTGTTGTTGTT  450

seq1  GTTGTTGTTGTTGTTGTTTTAGCATTCTTTGACTGCTGTAGGAAACAGCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTTGTTGTTGTTGTTTTAGCATTCTTTGACTGCTGTAGGAAACAGCA  500

seq1  GGCTGGGGGAGTGGGGGCTTTCTGGGTTAGGTGACTGATCTCTG-TTTTC  549
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  GGCTGGGGGAGTGGGGGCTTTCTGGGTTAGGTGACTGATCTCTGTTTTTC  550

seq1  ATACCTACTTGGATTTGATTCTGTTTTTGAGCACTGGCCATCCTCCTGAA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCTACTTGGATTTGATTCTGTTTTTGAGCACTGGCCATCCTCCTGAA  600

seq1  AATGACTGATCACATTGTAGAATAGGAAGCCACAGGTC-TTTTTCATTCT  648
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  AATGACTGATCACATTGTAGAATAGGAAGCCACAGGTCTTTTTTCATTCT  650

seq1  TGCTTACCTGAAAATTGAATCTTGAATTGTG  679
      ||||||| |||||||||||||||||||||||
seq2  TGCTTACTTGAAAATTGAATCTTGAATTGTG  681