BAC Information

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BAC

Clone NameB6Ng01-008F19
Chromosome3 (Build37)
Map Location 91,302,526 - 91,303,566
singlet/doubletsinglet
Overlap genenone
Upstream gene2500003M10Rik, S100a1, S100a13, S100a14, S100a16, EG628324, S100a3, S100a4, S100a5, S100a6, S100a7a, S100a8, S100a9, LOC668165, LOC383949, Pglyrp4, LOC329706, EG545541, LOC635737, EG668174, LOC668179, LOC635756, 4930529C04Rik, 9130204L05Rik
Downstream geneLOC100042463, Pglyrp3, EG619750, Lor, A030004J04Rik, Sprr2a, LOC100042999, LOC545543, LOC100043005, LOC545545, LOC100042514, LOC619984, Sprr2b, Sprr2c, Sprr2d, Sprr2e, Sprr2f, Sprr2g, Sprr2h, Sprr2i, Sprr2j, LOC100043022, Sprr2k, Sprr1b, Sprr3, LOC100042575, Sprr1a
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-008F19.bB6Ng01-008F19.g
ACCDH844643DH844644
length1,0561,019
definitionDH844643|Mus musculus domesticus DNA, BAC clone: B6Ng01-008F19, 5' end.DH844644|Mus musculus domesticus DNA, BAC clone: B6Ng01-008F19, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaattcagaatcatcctgaataggttcagcagtctctatcggtaa
aacaacaatttctgcatattgaacatcaattgctatattaagagactctt
gaaaacctgttaacaccataagtattgcatctaatttgatttcggaacca
atttatacggactatcaactaccttactgctattatctgatttatatcct
gcctttcctgattaattagcatcagtgtaaaatgtagaggttctaggaat
ggagtttttttttattatacaaggaagaatccaattaattacttttatga
actgaagtcactttcttttatgatatttgttattattctctcccccccaa
aattattgcactctttttgtgaacattcatcttgtgtgttagcatctcaa
cattggtaaaacatacaatgatttcaacaggatcctttccagctaattat
caaagtcttatttctccttttagtattaattcagcaactttatctatgta
ggcttttaaaaattcttactttggccctcccatctttcagctgaaaccag
tggaggctgcttagggctccagagtactcttcacactgcaggatctcagg
atgacctcaggatcactggtgagtggaaagaaacatcagctccaaagaat
cgcagagggtcttgtgccagcaagaacaaggacaaagaaaccccgcctga
ccagaggctgtgttccattcaggtcagggccagccctgccatcttctgcg
tgaacctggcctatggcttcgagggccccagaggactctgcatacagcag
gacccctagaagatccaggaccccgtgatcacgtgagagcacatgggtga
aagaagcaacagagcttcttcgacagggtcccttcgggcctttatcctta
gccaggatgtagagctgagacacagaaccctgggcactttccttgcagag
gagagtctgcctacaggaagctctgacccaggactcaggaggtggaacag
tgctcatactgctgacactgccctatagaggagaagattgctggcagaga
gtgcta
gaattctttctttaaatctgagccctagtttttaaaggggttatataatt
ttttggagtccttctttttgggaaaggatctttacatatcctaaatcaga
tagcgggctaatatccaatatatataaagaactcaagaaaatggacttat
tttctgttttgtactcctttttggtgtgcttgcttgttccacttctagaa
ctttgtgtgtcctttaaactgttgatgtgaaaattttgaaattacttata
aagtcatttattcctatgaatgttgttcttagcactgcttacattgtgtc
ccctctctatggatatgatgtaccttaattttcagtgagtactagaaaca
tttcatttatttctttattacttcacttatcacaagattagtgagtagaa
attgttctatttccattagaatgtagtctttcagtgtttctcttgttttg
gaagtacagatgattttgggctgataggacatactgttttatttgaattt
tttctatcacttgaggcatgattgtgaccaatatgagatgaaatttttga
gaaggattcttgagggaatgagaagacattatattgttttgtgtttagat
gaaatatagattctatagatgtttattaggtccatttgatttatcatgcc
actttgtttcattatttctaggtatagatttttctggatgttctgtcact
tagtgagagtggagtgttgaagtttgccagtattaatgactgagttttga
ggtgtaatttaagctttaacaatcttccttttactaatatatgtgccttt
ctgtttgggtataggtcttagggccttcttggagcacttttgcttggcat
agaggctcagagctctctagtatgtgtgacaaagaaaagcttatatgttt
ggttagaagggagagaggtgcctagtaccaaatttacctactcggttgct
aaatcatatgttgactccccaattataggacttcagctagtcaggcttgt
gtctgttaaatctaactga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_91302526_91303566
seq2: B6Ng01-008F19.b_67_1101

seq1  TGAATAGGTTCAGCAGTCTCTATCGGTAAAACAACAATTTCTGCATATTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATAGGTTCAGCAGTCTCTATCGGTAAAACAACAATTTCTGCATATTG  50

seq1  AACATCAATTGCTATATTAAGAGACTCTTGAAAACCTGTTAACACCATAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATCAATTGCTATATTAAGAGACTCTTGAAAACCTGTTAACACCATAA  100

seq1  GTATTGCATCTAATTTGATTTCGGAACCAATTTATACGGACTATCAACTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTGCATCTAATTTGATTTCGGAACCAATTTATACGGACTATCAACTA  150

seq1  CCTTACTGCTATTATCTGATTTATATCCTGCCTTTCCTGATTAATTAGCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTACTGCTATTATCTGATTTATATCCTGCCTTTCCTGATTAATTAGCA  200

seq1  TCAGTGTAAAATGTAGAGGTTCTAGGAATGGAGTTTTTTTTTATTATACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTGTAAAATGTAGAGGTTCTAGGAATGGAGTTTTTTTTTATTATACA  250

seq1  AGGAAGAATCCAATTAATTACTTTTATGAACTGAAGTCACTTTCTTTTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGAATCCAATTAATTACTTTTATGAACTGAAGTCACTTTCTTTTAT  300

seq1  GATATTTGTTATTATTCTCTCCCCCCCAAAATTATTGCACTCTTTTTGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATTTGTTATTATTCTCTCCCCCCCAAAATTATTGCACTCTTTTTGTG  350

seq1  AACATTCATCTTGTGTGTTAGCATCTCAACATTGGTAAAACATACAATGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATTCATCTTGTGTGTTAGCATCTCAACATTGGTAAAACATACAATGA  400

seq1  TTTCAACAGGATCCTTTCCAGCTAATTATCAAAGTCTTATTTCTCCTTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAACAGGATCCTTTCCAGCTAATTATCAAAGTCTTATTTCTCCTTTT  450

seq1  AGTATTAATTCAGCAACTTTATCTATGTAGGCTTTTAAAAATTCTTACTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATTAATTCAGCAACTTTATCTATGTAGGCTTTTAAAAATTCTTACTT  500

seq1  TGGCCCTCCCATCTTTCAGCTGAAACCAGTGGAGGCTGCTTAGGGCTCCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCCTCCCATCTTTCAGCTGAAACCAGTGGAGGCTGCTTAGGGCTCCA  550

seq1  GAGTACTCTTCACACTGCAGGATCTCAGGATGACCTCAGGATCACTGGTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTACTCTTCACACTGCAGGATCTCAGGATGACCTCAGGATCACTGGTG  600

seq1  AGTGGAAAGAAACATCAGCTCCAAAGAATCGCAGAGGGTCTTGTGCCAGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGAAAGAAACATCAGCTCCAAAGAATCGCAGAGGGTCTTGTGCCAGC  650

seq1  AAGAACAAGGACAAAGAAACCCCGCCTGACCAGAGGCTGTGTTCCATTCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAACAAGGACAAAGAAACCCCGCCTGACCAGAGGCTGTGTTCCATTCA  700

seq1  GGTCAGGGCCAGCCCTGCCATCTTCTGCGTGAACCTGGCCTATGGCTTCG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCAGGGCCAGCCCTGCCATCTTCTGCGTGAACCTGGCCTATGGCTTCG  750

seq1  AGGGCCCCAGAGGACTCTGCATACAGCAGGACCCCTAGAAGATCCAGGAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCCCCAGAGGACTCTGCATACAGCAGGACCCCTAGAAGATCCAGGAC  800

seq1  CCCGTGATCACGTGAGAGCACATGGGTGAAAGAAGCAACAGAGCTTCTTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCGTGATCACGTGAGAGCACATGGGTGAAAGAAGCAACAGAGCTTCTTC  850

seq1  GACAGGGTCCCTTCGGGCCTTTATCCTTAGCCAGGATGTAGAGCTGAGAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGGGTCCCTTCGGGCCTTTATCCTTAGCCAGGATGTAGAGCTGAGAC  900

seq1  ACAGAACCCTGGGCACTTTCCTTGCCAGAGGAGAGTCTGCCTACAGGGAA  950
      |||||||||||||||||||||||| ||||||||||||||||||||||  |
seq2  ACAGAACCCTGGGCACTTTCCTTG-CAGAGGAGAGTCTGCCTACAGG--A  947

seq1  GGCTCTGACCCCAGGACTCAGGAGGTGGAACAGTGCTCATACTGCTGGAC  1000
       ||||||| ||||||||||||||||||||||||||||||||||||| |||
seq2  AGCTCTGA-CCCAGGACTCAGGAGGTGGAACAGTGCTCATACTGCT-GAC  995

seq1  AACTGCCCTATAAGAGGAG-AGATTGCTGGCAGAGAGTGCTA  1041
       |||||||||| ||||||| ||||||||||||||||||||||
seq2  -ACTGCCCTAT-AGAGGAGAAGATTGCTGGCAGAGAGTGCTA  1035