BAC Information

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BAC

Clone NameB6Ng01-008K19
Chromosome3 (Build37)
Map Location 67,753,015 - 67,868,409
singlet/doubletdoublet
Overlap geneEG208426
Upstream geneShox2, Rsrc1, Mlf1, Gfm1, Lxn, Rarres1, Mfsd1, LOC667207, Gm412
Downstream geneEG545531, LOC631379, Schip1, Il12a, LOC639530, 1110032F04Rik, Ift80, Smc4, Trim59, LOC667272
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-008K19.bB6Ng01-008K19.g
ACCDH844853DH844854
length9491,090
definitionDH844853|Mus musculus domesticus DNA, BAC clone: B6Ng01-008K19, 5' end.DH844854|Mus musculus domesticus DNA, BAC clone: B6Ng01-008K19, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(67,867,461 - 67,868,409)(67,753,015 - 67,754,108)
sequence
gaattccacgatacacactgtgcaagcagctctgcctccctctcgtcccg
gcttctgtctgctgaagattctcacagcaaatatcagcagactcttctgc
ttctcgtaggttacctctttctgaggctggaatgtataaagagccacatg
acacccagtgatgtcatcttgaaagcaggtcacagttgctgccgtatgta
gatgaaatccttctattaagtatttagcataatgattttcttgaaaatct
atttgcatcaaataacttggtcttccaccaatacggttaaccctatcaac
agaatgcctcaaagaggtcgattcccagctcacacgcgaagccgtctcgg
ggtgagctgggatgagcttctggtgtgcctcaggagatgtgtcattatga
tcaactcatgaagagtgtgaagccccttctctgctccccaggagctgccg
tagaaacgagaatgatttcttcagacatggaatctacttcgaaaacaact
cagaatttttagcacgttaaaaaaaaatgtaatcttctaaaaatcagatc
accatgactgagaaataaaagctcaagcaactcccttcaactcctaacac
tattttatttaatgggataaaacatttcaaaagcatcaaaaacttactac
ttctgaaaagatttgaattgtattttcaaaaagttggtagggagctttct
ttaattattcacagatgtttttaaatacagaatgaagaaatagttaaaat
gttaacgatatattctaaataagccactgtaaaagataacatacaggtac
agttttaaggaacttaggatgagagtgtccagttttattctatacagcat
gcttctcttttattctagtagtcacatagcctaattaaagattttttttt
ttcagtcatgatgggcaaaacttccccatgcgtgaactcagtaggttat
gaattcctagcactgttgacatgaccttcattctttattaagggagccac
aaagaatattaaagaatgtttccctgccagtgcactgacctttgttcttc
ttggaactgtctaggaaaaaaaaatgtctatggatcagtctttaaaactt
tctttttggatttacaaacccttgtctgatttatcatagagcatcagtaa
ttatattcatcaaacagttctgtaacttcaactcttctttatttccagat
ggaattaaactcagtgaccattacttgattactatgaattaagtcataag
cctggctactgcccatttatgagtgacatgagtctaacaccagtcacaaa
tggccctgccttaagtaatctatttcattttaatctctaatgctctacat
aaacattgtaaaataaatctctaaaattaaactagggtttgttaaacatg
aaatgttttttaacaactcataagaaaatcaaatttgcaagataaagtgt
tatgctgggatgatttctaaaaaaaaaaaaaatattatgcatccaggtga
gctcagatgtcaggcaagaagagtagaattaaagctaactacatcatcct
cacccatcacacaaagcactgggtatgctttgcaccttcctgcgtttcca
ttcctttgattatggaactcctcctctcagcttgatatttcatatctcat
tctgaatacagattgtagaacttcttgataagagccaattttaggattat
gcttcaaatggacttttatatgaaaagcagatacttggatccactaatac
gttcctggagagaatatttatgactgtttttcacttgccctagaagagaa
cgattatattttcattgatgttttgtagcagatggctttatgtccttaag
aagccaaaacaatagctgagtgaggctgcacaatcaggtccatatctcta
taaagtgtatttttttccaaaaaggaaaaaatgtgacaaaagaaatgttt
tttttttccttgttttgcatattgagaatgctggttttattttacctctt
gctgctggacatactgatggagaaatgacacgaagttact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_67867461_67868409
seq2: B6Ng01-008K19.b_45_993 (reverse)

seq1  ATAACCTACTGAGTTCACGCATGGGGAAGTTTTGCCAATCATGACTG-AA  49
      |||||||||||||||||||||||||||||||||||| |||||||||| ||
seq2  ATAACCTACTGAGTTCACGCATGGGGAAGTTTTGCCCATCATGACTGAAA  50

seq1  AAAAAAAATCTTTAATTAGGCTATGTGACTAACTAGAAATAAAAGAGAAG  99
      |||||||||||||||||||||||||||||| ||||| |||||||||||||
seq2  AAAAAAAATCTTTAATTAGGCTATGTGACT-ACTAG-AATAAAAGAGAAG  98

seq1  CATGCTGTATAGAATAAAACTGGACACTCTCATCCTAAGTTCCTTAAAAC  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCTGTATAGAATAAAACTGGACACTCTCATCCTAAGTTCCTTAAAAC  148

seq1  TGTACCTGTATGTTATCTTTTACAGTGGCTTATTTAGAATATATCGTTAA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACCTGTATGTTATCTTTTACAGTGGCTTATTTAGAATATATCGTTAA  198

seq1  CATTTTAACTATTTCTTCATTCTGTATTT-AAAACATCTGTGAATAATTA  248
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  CATTTTAACTATTTCTTCATTCTGTATTTAAAAACATCTGTGAATAATTA  248

seq1  AAGAAAGCTCCCTACCAACTTTTTGAAAATACAATTCAAATCTTTTCAGA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAGCTCCCTACCAACTTTTTGAAAATACAATTCAAATCTTTTCAGA  298

seq1  AGTAGTAAGTTTTTGATGCTTTTGAAATGTTTTATCCCATTAAATAAAAT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGTAAGTTTTTGATGCTTTTGAAATGTTTTATCCCATTAAATAAAAT  348

seq1  AGTGTTAGGAGTTGAAGGGAGTTGCTTGAGCTTTTATTTCTCAGTCATGG  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTTAGGAGTTGAAGGGAGTTGCTTGAGCTTTTATTTCTCAGTCATGG  398

seq1  TGATCTGATTTTTAGAAGATTACATTTTTTTTTAACGTGCTAAAAATTCT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCTGATTTTTAGAAGATTACATTTTTTTTTAACGTGCTAAAAATTCT  448

seq1  GAGTTGTTTTCGAAGTAGATTCCATGTCTGAAGAAATCATTCTCGTTTCT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTGTTTTCGAAGTAGATTCCATGTCTGAAGAAATCATTCTCGTTTCT  498

seq1  ACGGCAGCTCCTGGGGAGCAGAGAAGGGGCTTCACACTCTTCATGAGTTG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGGCAGCTCCTGGGGAGCAGAGAAGGGGCTTCACACTCTTCATGAGTTG  548

seq1  ATCATAATGACACATCTCCTGAGGCACACCAGAAGCTCATCCCAGCTCAC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATAATGACACATCTCCTGAGGCACACCAGAAGCTCATCCCAGCTCAC  598

seq1  CCCGAGACGGCTTCGCGTGTGAGCTGGGAATCGACCTCTTTGAGGCATTC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCGAGACGGCTTCGCGTGTGAGCTGGGAATCGACCTCTTTGAGGCATTC  648

seq1  TGTTGATAGGGTTAACCGTATTGGTGGAAGACCAAGTTATTTGATGCAAA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGATAGGGTTAACCGTATTGGTGGAAGACCAAGTTATTTGATGCAAA  698

seq1  TAGATTTTCAAGAAAATCATTATGCTAAATACTTAATAGAAGGATTTCAT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATTTTCAAGAAAATCATTATGCTAAATACTTAATAGAAGGATTTCAT  748

seq1  CTACATACGGCAGCAACTGTGACCTGCTTTCAAGATGACATCACTGGGTG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACATACGGCAGCAACTGTGACCTGCTTTCAAGATGACATCACTGGGTG  798

seq1  TCATGTGGCTCTTTATACATTCCAGCCTCAGAAAGAGGTAACCTACGAGA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGTGGCTCTTTATACATTCCAGCCTCAGAAAGAGGTAACCTACGAGA  848

seq1  AGCAGAAGAGTCTGCTGATATTTGCTGTGAGAATCTTCAGCAGACAGAAG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGAAGAGTCTGCTGATATTTGCTGTGAGAATCTTCAGCAGACAGAAG  898

seq1  CCGGGACGAGAGGGAGGCAGAGCTGCTTGCACAGTGTGTATCGTGGAATT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGGGACGAGAGGGAGGCAGAGCTGCTTGCACAGTGTGTATCGTGGAATT  948

seq1  C  949
      |
seq2  C  949

seq1: chr3_67753015_67754108
seq2: B6Ng01-008K19.g_67_1156

seq1  GAATTCCTAGCACTGTTGACATGACCTTCATTCTTTATTAAGGGAGCCAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTAGCACTGTTGACATGACCTTCATTCTTTATTAAGGGAGCCAC  50

seq1  AAAGAATATTAAAGAATGTTTCCCTGCCAGTGCACTGACCTTTGTTCTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAATATTAAAGAATGTTTCCCTGCCAGTGCACTGACCTTTGTTCTTC  100

seq1  TTGGAACTGTCTAGGAAAAAAAAATGTCTATGGATCAGTCTTTAAAACTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAACTGTCTAGGAAAAAAAAATGTCTATGGATCAGTCTTTAAAACTT  150

seq1  TCTTTTTGGATTTACAAACCCTTGTCTGATTTATCATAGAGCATCAGTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTTGGATTTACAAACCCTTGTCTGATTTATCATAGAGCATCAGTAA  200

seq1  TTATATTCATCAAACAGTTCTGTAACTTCAACTCTTCTTTATTTCCAGAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATTCATCAAACAGTTCTGTAACTTCAACTCTTCTTTATTTCCAGAT  250

seq1  GGAATTAAACTCAGTGACCATTACTTGATTACTATGAATTAAGTCATAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATTAAACTCAGTGACCATTACTTGATTACTATGAATTAAGTCATAAG  300

seq1  CCTGGCTACTGCCCATTTATGAGTGACATGAGTCTAACACCAGTCACAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGCTACTGCCCATTTATGAGTGACATGAGTCTAACACCAGTCACAAA  350

seq1  TGGCCCTGCCTTAAGTAATCTATTTCATTTTAATCTCTAATGCTCTACAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCCTGCCTTAAGTAATCTATTTCATTTTAATCTCTAATGCTCTACAT  400

seq1  AAACATTGTAAAATAAATCTCTAAAATTAAACTAGGGTTTGTTAAACATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATTGTAAAATAAATCTCTAAAATTAAACTAGGGTTTGTTAAACATG  450

seq1  AAATGTTTTTTAACAACTCATAAGAAAATCAAATTTGCAAGATAAAGTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTTTTTTAACAACTCATAAGAAAATCAAATTTGCAAGATAAAGTGT  500

seq1  TATGCTGGGATGATTTCTAAAAAAAAAAAAAATATTATGCATCCAGGTGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCTGGGATGATTTCTAAAAAAAAAAAAAATATTATGCATCCAGGTGA  550

seq1  GCTCAGATGTCAGGCAAGAAGAGTAGAATTAAAGCTAACTACATCATCCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCAGATGTCAGGCAAGAAGAGTAGAATTAAAGCTAACTACATCATCCT  600

seq1  CACCCATCACACAAAGCACTGGGTATGCTTTGCACCTTCCTGCGTTTCCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCATCACACAAAGCACTGGGTATGCTTTGCACCTTCCTGCGTTTCCA  650

seq1  TTCCTTTGATTATGGAACTCCTCCTCTCAGCTTGATATTTCATATCTCAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTTGATTATGGAACTCCTCCTCTCAGCTTGATATTTCATATCTCAT  700

seq1  TCTGAATACAGATTGTAGAACTTCTTGATAAGAGCCAATTTTAGGATTAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAATACAGATTGTAGAACTTCTTGATAAGAGCCAATTTTAGGATTAT  750

seq1  GCTTCAAATGGACTTTTATATGAAAAGCAGATACTTGGATCCACTAATAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCAAATGGACTTTTATATGAAAAGCAGATACTTGGATCCACTAATAC  800

seq1  GTTCCTGGAGAGAATATTTATGACTGTTTTTCACTTGCCCTAGAAGAGAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCTGGAGAGAATATTTATGACTGTTTTTCACTTGCCCTAGAAGAGAA  850

seq1  CGATTATATTTTCATTGATGCTTTGTAGCAGATGGCTTTATGTCCTTAAG  900
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  CGATTATATTTTCATTGATGTTTTGTAGCAGATGGCTTTATGTCCTTAAG  900

seq1  AAGCCAAAACAATAGCTGAGTGAGGCTGCACAATCAGGTCCATATCTCTA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCAAAACAATAGCTGAGTGAGGCTGCACAATCAGGTCCATATCTCTA  950

seq1  TAAAGTGTATTTTTTTCCAAAAAAGGAAAAAATGTGACAAAAGAAATGTT  1000
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  TAAAGTGTATTTTTTTCC-AAAAAGGAAAAAATGTGACAAAAGAAATGTT  999

seq1  TTTTTTTTCCCTTGGTTTTGCATATTGAGAATGCTGGGTTTTTATTTACC  1050
      ||||||||||  | ||||||||||||||||||||| ||||||  ||||||
seq2  TTTTTTTTCC--TTGTTTTGCATATTGAGAATGCT-GGTTTTATTTTACC  1046

seq1  TCTGGCTGCT-GACATACTGATGGGGAAATGGACACGAAGCTACT  1094
      ||| |||||| ||||||||||||| ||||| ||||||||| ||||
seq2  TCTTGCTGCTGGACATACTGATGGAGAAAT-GACACGAAGTTACT  1090