BAC Information

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BAC

Clone NameB6Ng01-009F15
Chromosome3 (Build37)
Map Location 35,215,516 - 35,216,351
singlet/doubletsinglet
Overlap genenone
Upstream geneEG665636, EG622074, Sox2, LOC100041108
Downstream geneLOC665655, Ube2l3-ps1, LOC625963, Atp11b, LOC665667, Dcun1d1, Mccc1, BC050811, Acad9, D3Ertd254e, Gpr103
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-009F15.bB6Ng01-009F15.g
ACCDH845316DH845317
length8401,157
definitionDH845316|Mus musculus domesticus DNA, BAC clone: B6Ng01-009F15, 5' end.DH845317|Mus musculus domesticus DNA, BAC clone: B6Ng01-009F15, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctgccccatgtctgatagaacctgcaaactctgttctcagcggtt
ccccacagctagctagagatggttcaaggatataaggttttcctggtatg
taaagactgttcaagggctgtgctagagtgaatcagatggagcaatagtt
gacaccatgcatactaaaatatctaagcaacctatttgtgacgagtcaaa
ccttcagagaagaaaaggttggggctggagcattccccgggaacctgcat
ctgttctgtggcagctgagtgtgagtgggagacatatgctctgtggtctg
tctccccgcaggaaatcccatggaaatacaatgatcatagaaagtgccgt
gtaagccagagcgaactcgcatcccgacaggtgcctgccaagtagagtaa
ctaggtgcgcacgttttccagtacaactgtttcattattaattcatggtc
caggtctctggtacatgctgttgctaatattaggtttcaaaggagaataa
tgaatgggcacactggtctaaatgtctcaacattttttaaacaatgtttg
cagtgctaaattctatttctggactaattggggtctttacataaacaaga
ggagagttatgatgtgttggggggggcagtacataattgtcctacagctt
agccacagaaaaggtaagggtgattcccgactgggagcagcgctgtgtgt
aggtgggaatttcttccctttgggtctcaatgtgtttagttttgtatcag
aacagggaaagaggggtctcctgggtgagggaggtgttgaaccagtggct
ttgctttggagggaaatagagggagtccttgtctggatgt
gaattctcacctgaggaataccgaatggctgagaaacacctgaaaaaatg
ttcagcatccttaatcatcaggaaaatgcaaatcaaaacaaccctgagat
tccatctcacaccagtcagaatgggtaagatcaaatattcaggtgacaga
agatgctggcgaggatgtggagaaagaggaacactcctccactcttggtg
ggattgcaagcttgtacaaccactctagaaatcaatctggcggtttctca
gaaaattggacgtggtactaccggcggatcccacaatacctctcctgggc
atatatccagaagatgttccaactagtaagaaagaaacatgctctactat
gttcatagcagcctcatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacaaaaaatgtggtacatttacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctaggcaa
atggttggacctggagggcattatcgtgagtgaggtaacccaatcacaaa
agaactcaaaggatatgtactccctgataagtggatattagcccaggaac
ttagaatacccaagatataagttacaatttgcaaaacacatgaaactcaa
gaagaatgaagtccaaagtgtagacactttgccccttcttagaattggga
acaaaacacctatggaaggagttcagagacaaaggttggagctgagacaa
aagatggatcatctagagactgccatatccagggatccatcccataatca
gcctccaaatgctgacaccattgcatacactagcaagattttgctgatag
gaccctgatatagctgtcgggcctagcaacacagaagtggatgctcacag
tcagctttggatggatcacagggtccccaatggaggagctagagaaatac
ccaaggagctaaagggatcttgcactttatagtggaacatattctgacta
acagtacctcagagctcttgattctagctgctatgtatcaaaagaatggc
ctagttggcctatacttggaagagaggcctatgacttgcaactttttatg
gcctcagtaaggggaagctcatgggctaaaagtgggaatcgtgtgggcga
aggtgca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_35215516_35216351
seq2: B6Ng01-009F15.b_47_885 (reverse)

seq1  CATCCAGACAAGGACTCCCTCTGTCTTCCTCCAGAGCAAAG-CACTGGTT  49
      |||||||||||||||||||||| | | |||||| ||||||| ||||||||
seq2  CATCCAGACAAGGACTCCCTCTATTTCCCTCCAAAGCAAAGCCACTGGTT  50

seq1  CAACACCTCCCTCACCCAGGAGACCCCTCTTTCCCTGTTCTGATAC-AAA  98
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  CAACACCTCCCTCACCCAGGAGACCCCTCTTTCCCTGTTCTGATACAAAA  100

seq1  CT-AACACATTGAGACCCAAAGGGAAGAAATTCCCACCTACACACAGCGC  147
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAACACATTGAGACCCAAAGGGAAGAAATTCCCACCTACACACAGCGC  150

seq1  TGCTCCCAGTCGGGAATCACCCTTACCTTTTCTGTGGCTAAGCTGTAGGA  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCCCAGTCGGGAATCACCCTTACCTTTTCTGTGGCTAAGCTGTAGGA  200

seq1  CAATTATGTACTGCCCCCCCCAACACATCATAACTCTCCTCTTGTTTATG  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTATGTACTGCCCCCCCCAACACATCATAACTCTCCTCTTGTTTATG  250

seq1  TAAAGACCCCAATTAGTCCAGAAATAGAATTTAGCACTGCAAACATTGTT  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGACCCCAATTAGTCCAGAAATAGAATTTAGCACTGCAAACATTGTT  300

seq1  TAAAAAATGTTGAGACATTTAGACCAGTGTGCCCATTCATTATTCTCCTT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAAATGTTGAGACATTTAGACCAGTGTGCCCATTCATTATTCTCCTT  350

seq1  TGAAACCTAATATTAGCAACAGCATGTACCAGAGACCTGGACCATGAATT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAACCTAATATTAGCAACAGCATGTACCAGAGACCTGGACCATGAATT  400

seq1  AATAATGAAACAGTTGTACTGGAAAACGTGCGCACCTAGTTACTCTACTT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATGAAACAGTTGTACTGGAAAACGTGCGCACCTAGTTACTCTACTT  450

seq1  GGCAGGCACCTGTCGGGATGCGAGTTCGCTCTGGCTTACACGGCACTTTC  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGGCACCTGTCGGGATGCGAGTTCGCTCTGGCTTACACGGCACTTTC  500

seq1  TATGATCATTGTATTTCCATGGGATTTCCTGCGGGGAGACAGACCACAGA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGATCATTGTATTTCCATGGGATTTCCTGCGGGGAGACAGACCACAGA  550

seq1  GCATATGTCTCCCACTCACACTCAGCTGCCACAGAACAGATGCAGGTTCC  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATATGTCTCCCACTCACACTCAGCTGCCACAGAACAGATGCAGGTTCC  600

seq1  CGGGGAATGCTCCAGCCCCAACCTTTTCTTCTCTGAAGGTTTGACTCGTC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGGGAATGCTCCAGCCCCAACCTTTTCTTCTCTGAAGGTTTGACTCGTC  650

seq1  ACAAATAGGTTGCTTAGATATTTTAGTATGCATGGTGTCAACTATTGCTC  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAATAGGTTGCTTAGATATTTTAGTATGCATGGTGTCAACTATTGCTC  700

seq1  CATCTGATTCACTCTAGCACAGCCCTTGAACAGTCTTTACATACCAGGAA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTGATTCACTCTAGCACAGCCCTTGAACAGTCTTTACATACCAGGAA  750

seq1  AACCTTATATCCTTGAACCATCTCTAGCTAGCTGTGGGGAACCGCTGAGA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTTATATCCTTGAACCATCTCTAGCTAGCTGTGGGGAACCGCTGAGA  800

seq1  ACAGAGTTTGCAGGTTCTATCAGACATGGGGCAGAATTC  836
      |||||||||||||||||||||||||||||||||||||||
seq2  ACAGAGTTTGCAGGTTCTATCAGACATGGGGCAGAATTC  839