BAC Information

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BAC

Clone NameB6Ng01-009F19
Chromosome3 (Build37)
Map Location 113,391,076 - 113,391,882
singlet/doubletsinglet
Overlap genenone
Upstream geneUtp14B-ps, EG433643, OTTMUSG00000022462, LOC668723, Amy2-2, Amy2-1, LOC100043684, LOC100043686, LOC100043688, LOC100043207, Amy1, Rnpc3
Downstream geneCol11a1, LOC100043220
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-009F19.bB6Ng01-009F19.g
ACCDH845324DH845325
length1,1191,163
definitionDH845324|Mus musculus domesticus DNA, BAC clone: B6Ng01-009F19, 5' end.DH845325|Mus musculus domesticus DNA, BAC clone: B6Ng01-009F19, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaagacccatacctaaacatgataaaagcaatctacagcaaacga
gtagccaacatcaaagtaaatggtgagaagctggaagcaatcccactaaa
atcagggactagacaaggctccccactttcttcctacctattcaacattg
tacttgaagtcctagtcagagcaattcgacaacaaagggagatcaagggg
atacaaattggaaaggaagaagtcaaaatatcactttttgcagatgatat
gatagtatatataagtgaccctaaaaattccaccagagaactcttaaacc
cgataaacttagcttccgtgaagtagctggatataaaattaactcaaaca
agtcaatgtcctttctctacacaaagaataaacaggctgagaaagaaatt
agggaaacaacacccttctcaattatcacaaataatataaaataccttgg
cgtgactctaactaaggaagtgaaagatctgcatgaaaagaacttcaagt
ctctgaagagagaaattgaagaagatctcagaaaatggaaagatctccca
tgctcatggattggcaggatcaatatagtaaaaatggctttcttgccaaa
agcaatctacagattcaatgcaattcccatcaaaattccaactcaattct
tcaacgaattagaaagagaatttgcaaattcatctggaatgtatcaatat
ttattgcaatggtatgcacaatagctacattatggaaatagcctaggtgt
ctaaaattagaggaacatgtaaataatgtatcatacacacacacacacac
acacacacacacacacacattgaagattattctggtctaaggagaaacaa
agaaaggtttggaacagagtggaagcaactattagtcatcttaaacaaat
tatgccaagctgggcatggtggcacacaccttaactccagaactcagaag
caaaggattagagagagcctagtctacatagtgagttcatggtagctggt
ctgtgtagtgccaggacatcagagctacttagtgtgacctggtttaaaag
aattaattggtccagaaaaacaaatattttccttcatttgcagtttttag
acttacatagaacacacta
gaattctcacctgaggaataccgaatgtcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcggggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatgcagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagacttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctaggcaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagccccaaacc
taggatacccaagatataagatacaatttgctaaacacatgaaactcaag
aagaatgaagactgaagtgtgaacactatgcctctccttagaattgggaa
caaaacacccatggaaggagttacagagacaaagtttggagctaagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaacgctgacaccattgcatatactagcaagattttatcgaaag
gacccagatatagctgtctcttgtgagactatgccggggcctagcaaaca
cagaagtggatgctcacagtcagctaatggatggatcacaggctccaatg
gagagctagagaaagtactcaagagctaaagtatctgcatcctatagtgg
atcacattatgaactaaccgagtaccctggaactctgactctagctgcta
ttgaatcaaaagatggccagtcggcatcactgcaaagaagagccattgga
actgcacctttatttttccatataggggaatactatgcaaaatagtactg
cttgctgagtagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_113391076_113391882
seq2: B6Ng01-009F19.b_369_1165

seq1  AGTAGCTGGATATAAAATTAACTCAAACAAGTCAATGTCCTTTCTCTACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGCTGGATATAAAATTAACTCAAACAAGTCAATGTCCTTTCTCTACA  50

seq1  CAAAGAATAAACAGGCTGAGAAAGAAATTAGGGAAACAACACCCTTCTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGAATAAACAGGCTGAGAAAGAAATTAGGGAAACAACACCCTTCTCA  100

seq1  ATTATCACAAATAATATAAAATACCTTGGCGTGACTCTAACTAAGGAAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATCACAAATAATATAAAATACCTTGGCGTGACTCTAACTAAGGAAGT  150

seq1  GAAAGATCTGCATGAAAAGAACTTCAAGTCTCTGAAGAGAGAAATTGAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGATCTGCATGAAAAGAACTTCAAGTCTCTGAAGAGAGAAATTGAAG  200

seq1  AAGATCTCAGAAAATGGAAAGATCTCCCATGCTCATGGATTGGCAGGATC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATCTCAGAAAATGGAAAGATCTCCCATGCTCATGGATTGGCAGGATC  250

seq1  AATATAGTAAAAATGGCTTTCTTGCCAAAAGCAATCTACAGATTCAATGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATAGTAAAAATGGCTTTCTTGCCAAAAGCAATCTACAGATTCAATGC  300

seq1  AATTCCCATCAAAATTCCAACTCAATTCTTCAACGAATTAGAAAGAGAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCCCATCAAAATTCCAACTCAATTCTTCAACGAATTAGAAAGAGAAT  350

seq1  TTGCAAATTCATCTGGAATGTATCAATATTTATTGCAATGGTATGCACAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCAAATTCATCTGGAATGTATCAATATTTATTGCAATGGTATGCACAA  400

seq1  TAGCTACATTATGGAAATAGCCTAGGTGTCTAAAATTAGAGGAACATGTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTACATTATGGAAATAGCCTAGGTGTCTAAAATTAGAGGAACATGTA  450

seq1  AATAATGTATCATACACACACACACACACACACACACACACACACACATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATGTATCATACACACACACACACACACACACACACACACACACATT  500

seq1  GAAGATTATTCTGGTCTAAGGAGAAACAAAGAAAGGTTTGGAACAGAGTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGATTATTCTGGTCTAAGGAGAAACAAAGAAAGGTTTGGAACAGAGTG  550

seq1  GAAGCAACTATTAGTCATCTTAAACAAATTATGCCAAGCTGGGCATGGTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCAACTATTAGTCATCTTAAACAAATTATGCCAAGCTGGGCATGGTG  600

seq1  GCACACACCTTAACCCCAGAACTCAGAAGGCAAAGGAATTAGAGAAGAGC  650
      |||||||||||||| ||||||||||||| ||||||| ||||||| |||||
seq2  GCACACACCTTAACTCCAGAACTCAGAA-GCAAAGG-ATTAGAG-AGAGC  647

seq1  CTAGTCTACATAGTGAGTTCAAGGATAGCTGGTCTGTGTAGTGCCAGGAC  700
      ||||||||||||||||||||| || |||||||||||||||||||||||||
seq2  CTAGTCTACATAGTGAGTTCATGG-TAGCTGGTCTGTGTAGTGCCAGGAC  696

seq1  AACCAGAGCTACTAAGTGTGACCTGGTTTAAAAAGAAATTATATTGGTCC  750
       | |||||||||| |||||||||||||||||||   ||||| |||||| |
seq2  -ATCAGAGCTACTTAGTGTGACCTGGTTTAAAA--GAATTA-ATTGGT-C  741

seq1  CAGAAAAACAAATATATTTTCTTTCATTTGCAGTTTTTAGACTTACATAG  800
      |||||||||||  |||||||| ||||||||||||||||||||||||||||
seq2  CAGAAAAACAA--ATATTTTCCTTCATTTGCAGTTTTTAGACTTACATAG  789

seq1  -ACACACT  807
       |||||||
seq2  AACACACT  797