BAC Information

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BAC

Clone NameB6Ng01-009H01
Chromosome3 (Build37)
Map Location 151,021,104 - 151,022,281
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040455, LOC100040463, LOC623554
Downstream geneEltd1, Ifi44, H28, Ptgfr, LOC100040741, LOC100040597, LOC676548, Gipc2, Dnajb4, Fubp1, Nexn, C030011O14Rik, Usp33
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-009H01.bB6Ng01-009H01.g
ACCDH845378DH845379
length1,1431,173
definitionDH845378|Mus musculus domesticus DNA, BAC clone: B6Ng01-009H01, 5' end.DH845379|Mus musculus domesticus DNA, BAC clone: B6Ng01-009H01, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcatagtttttttgatggccacaggatgacaagttcagggaaccac
actgctggaggatgggctctggcccggggccaaaaggaaaagagcaggga
ggagagagctccctcaagttcccatggggaggagagtccttagcttgttt
gggcagcttggcttgggttggctgccaatcctggctggagcctaggaaag
cctcttgatgggctcattaggggaagacttgccccattgctccagcaagg
tggatcccaatgagaagaggcagtccatggatgtaaggtgtttattgtac
aaaggcagagaaagggagaagagtagaaaagtagaggctggccatggcca
tgtagagagaagggagaagggaaggcagagagcaggggaacaagagggca
agagaaaaaggtaggagagtaagaaagggaggaggggcaaaccgctcctt
ttataatgggctgggcctacctgtctgttgccaagtaactgtgggggtgg
agtccagacaaaataccagaatcttggggcattgcctaagtgactgatgg
ccacaaaattatggatctggggcctcgttgcaggagcctagtgcctggga
gagtgtagcaaacttctttccattccttgcagattaatctgctaggtctc
tggggtttaaactgagctcaaccagaaaacagggtacctttcactgcccc
acagtgttttgctggagcagatgcttgagaggacccatgatgtttggaaa
gagaataagtttaacccaacagtcaccagacagtggacaatgctctggca
ttgggttcgccttgcaactcttttgctggtcatcattgggcttcacagat
gctggttttcactgatgatacctttgcagcagttcacctttgtttcctta
gcctgatctttgcttgttgttacttcacagggagaaggcacctaaagaat
atctggtgatagttggctgcttcttttccaattcattcctcgggctttta
ctaatcagtggagcctccaaggtttcttctgggattgaatcgctgctatt
gaacctgttgtggtttgtgagtggactggactgcctgccgctgaattatg
ttggggttttgctagtggaccttgacctcccgaacagaatacg
gaattctccctactgaccaggacttccgtccagttaagtggcaattaggt
atgcccaggatagaagtactactcttgcactactaagaatgtcttgccat
gatggtcattgtgttttttcggcattatagctgggtaagactattgactc
tctcctctgttaatagtctgcatggctcctgtatgagaactggtcctcag
taaggaggcttccaggtcagattcagatcaatttcttcacatgctatgcc
cagagtgtgtggtgttgtcagcaagagggtcttagcttttgttctggaag
gtgccaaggacaatggaaataggctattttgttttggagatttcttggac
tgatcaacaacttgaaatgagatttcctgtgtctggccctggggattttc
tgagacagtctatggatttcggatgaggccctgtcatctcaattggaata
atgtctaagaaaaattttaataattacttaatataagttaagtaatttac
tttccttggttcttacagatccatatggcctagacataatgacctgacaa
tggaagtgagatctgtgctaccactcaaaataagggcaattaaatgaggt
cagcatttggtttatggaaaataattaccagcctcagtcttttcaaataa
tattgcctcgagacaagaaaattaatctatatgattctgtgacatgggta
tgtctagacatttagactgtcacacgaggaaattaactttttcttaaaag
ccaataaatgaattgctggtaattccaacaaagattaataattaggtatg
aaaaagcagttagcattttaggagcacacgtatcactgttatttgaacgc
attgcctttaactgggtttatggaaatagcctcccttcaatttttctctg
taagagtaacatgctcacacctctacaatattcacagacaatcacaaaga
acattcttgaacagcagataaacatgtaattaaattcagttaccattctt
caggattacccatttacgaattggtgaacttctgagattctagaagaagc
tgcttctagtacactgtgctaacaaatcccacattaaacatctcttttgt
ttgtactctgtataatgactccagaccaacggtaagaagagatatgggtt
acagcctcattctgaatcttcta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_151021104_151022281
seq2: B6Ng01-009H01.g_68_1240 (reverse)

seq1  TAGAAGGATCAGAATAGAGGCTGT-ACCCATTTACTCCTTCTTACCGTTG  49
      ||||||  ||||||| |||||||| |||||| | || |||||||||||||
seq2  TAGAAGATTCAGAAT-GAGGCTGTAACCCATAT-CT-CTTCTTACCGTTG  47

seq1  GCCTGGAGTCATTATTACA-AGTGTCAGAACAAAGAGATGTTTTTATGTG  98
      | |||||||||||| |||| |||  || |  ||||||||| ||| |||||
seq2  GTCTGGAGTCATTA-TACAGAGT-ACAAACAAAAGAGATG-TTTAATGTG  94

seq1  GGATTTGTTAGCACAGTGTACTAAGAAGCAGC-TCTTCTAGAATCTCCAG  147
      |||||||||||||||||||||| ||||||||| ||||||||||||||   
seq2  GGATTTGTTAGCACAGTGTACT-AGAAGCAGCTTCTTCTAGAATCTCAGA  143

seq1  AGTTCACCAAATTCGTAAATGGGTAATCCTGAAGAATGGTAACTGAATTT  197
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCACC-AATTCGTAAATGGGTAATCCTGAAGAATGGTAACTGAATTT  192

seq1  AATTTACATGTTTATCTTGCTGTTC-AGAATGTTTCTTTGTGATTGTCTG  246
      || ||||||||||||| |||||||| |||||| |||||||||||||||||
seq2  AA-TTACATGTTTATC-TGCTGTTCAAGAATG-TTCTTTGTGATTGTCTG  239

seq1  TGAATATTGTAGAGGTGTGAGCATGTTACTCTTACAGAG-AAAATTGAA-  294
      ||||||||||||||||||||||||||||||||||||||| ||||||||| 
seq2  TGAATATTGTAGAGGTGTGAGCATGTTACTCTTACAGAGAAAAATTGAAG  289

seq1  GGAGGCTATTTCCATAAACCCAGTTAAAGGCAATGCGTTCAAATAACAGT  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGCTATTTCCATAAACCCAGTTAAAGGCAATGCGTTCAAATAACAGT  339

seq1  GATACGTGTGCTCCTAAAATGCTAACTGCTTTTTCATACCTAATTATTAA  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACGTGTGCTCCTAAAATGCTAACTGCTTTTTCATACCTAATTATTAA  389

seq1  TCTTTGTTGGAATTACCAGCAATTCATTTATTGGCTTTTAAGAAAAAGTT  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTGTTGGAATTACCAGCAATTCATTTATTGGCTTTTAAGAAAAAGTT  439

seq1  AATTTCCTCGTGTGACAGTCTAAATGTCTAGACATACCCATGTCACAGAA  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTCCTCGTGTGACAGTCTAAATGTCTAGACATACCCATGTCACAGAA  489

seq1  TCATATAGATTAATTTTCTTGTCTCGAGGCAATATTATTTGAAAAGACTG  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATATAGATTAATTTTCTTGTCTCGAGGCAATATTATTTGAAAAGACTG  539

seq1  AGGCTGGTAATTATTTTCCATAAACCAAATGCTGACCTCATTTAATTGCC  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTGGTAATTATTTTCCATAAACCAAATGCTGACCTCATTTAATTGCC  589

seq1  CTTATTTTGAGTGGTAGCACAGATCTCACTTCCATTGTCAGGTCATTATG  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATTTTGAGTGGTAGCACAGATCTCACTTCCATTGTCAGGTCATTATG  639

seq1  TCTAGGCCATATGGATCTGTAAGAACCAAGGAAAGTAAATTACTTAACTT  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGGCCATATGGATCTGTAAGAACCAAGGAAAGTAAATTACTTAACTT  689

seq1  ATATTAAGTAATTATTAAAATTTTTCTTAGACATTATTCCAATTGAGATG  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTAAGTAATTATTAAAATTTTTCTTAGACATTATTCCAATTGAGATG  739

seq1  ACAGGGCCTCATCCGAAATCCATAGACTGTCTCAGAAAATCCCCAGGGCC  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGGCCTCATCCGAAATCCATAGACTGTCTCAGAAAATCCCCAGGGCC  789

seq1  AGACACAGGAAATCTCATTTCAAGTTGTTGATCAGTCCAAGAAATCTCCA  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACACAGGAAATCTCATTTCAAGTTGTTGATCAGTCCAAGAAATCTCCA  839

seq1  AAACAAAATAGCCTATTTCCATTGTCCTTGGCACCTTCCAGAACAAAAGC  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAAATAGCCTATTTCCATTGTCCTTGGCACCTTCCAGAACAAAAGC  889

seq1  TAAGACCCTCTTGCTGACAACACCACACACTCTGGGCATAGCATGTGAAG  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGACCCTCTTGCTGACAACACCACACACTCTGGGCATAGCATGTGAAG  939

seq1  AAATTGATCTGAATCTGACCTGGAAGCCTCCTTACTGAGGACCAGTTCTC  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTGATCTGAATCTGACCTGGAAGCCTCCTTACTGAGGACCAGTTCTC  989

seq1  ATACAGGAGCCATGCAGACTATTAACAGAGGAGAGAGTCAATAGTCTTAC  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAGGAGCCATGCAGACTATTAACAGAGGAGAGAGTCAATAGTCTTAC  1039

seq1  CCAGCTATAATGCCGAAAAAACACAATGACCATCATGGCAAGACATTCTT  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCTATAATGCCGAAAAAACACAATGACCATCATGGCAAGACATTCTT  1089

seq1  AGTAGTGCAAGAGTAGTACTTCTATCCTGGGCATACCTAATTGCCACTTA  1144
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGTGCAAGAGTAGTACTTCTATCCTGGGCATACCTAATTGCCACTTA  1139

seq1  ACTGGACGGAAGTCCTGGTCAGTAGGGAGAATTC  1178
      ||||||||||||||||||||||||||||||||||
seq2  ACTGGACGGAAGTCCTGGTCAGTAGGGAGAATTC  1173