BAC Information

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BAC

Clone NameB6Ng01-010C16
Chromosome3 (Build37)
Map Location 70,275,038 - 70,418,966
singlet/doubletdoublet
Overlap geneLOC670542
Upstream genePpm1l, LOC667309, B3galnt1, Rpl32-ps, Nmd3, LOC100041334, 1110032A04Rik, Gm414, LOC100041384, LOC625868
Downstream geneEG625901, EG667377
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-010C16.bB6Ng01-010C16.g
ACCDH845915DH845916
length997884
definitionDH845915|Mus musculus domesticus DNA, BAC clone: B6Ng01-010C16, 5' end.DH845916|Mus musculus domesticus DNA, BAC clone: B6Ng01-010C16, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(70,275,038 - 70,276,044)(70,418,083 - 70,418,966)
sequence
gaattcacttttttttctataattattgctgtgatattcctttgacctgg
agtctgcctagatttccatgggtcaccaggttatagcaagctctgcctct
tgcattgtatcaatacaattctataagtggaatatccacacaaaaattcg
ggtgacagccatgtatctactcagtctcatttgtgtgtgtatgtgtgtgt
gtataggtgagttttattgcaggaacacatgaataaatgttatattattg
gattaaaatgattttcttttcttttatagttctcattttctgtaactcat
aataattttcagaaaagaggcaagacttaaaagatgagagaaattgatcc
tttgtaaacggaaggatctccagatagctcaaagaaaatcagtactgcaa
ttaaatgagaatcccagggactgaaatgcaagactgtgataacaagacaa
aggttgaaaggttattttctgctaacttttcaatgccatttttaaatgaa
catttctaccttaatgtatttaaaatttgcaaaaaatgaatctggaactc
tttctttgattttttgttgttacttattagattttctggatcaaattgag
atgtaattaatttatattacttccataaatgttggtacttgatattcgtc
tgtgtatatcaaagtgaatggagaaacatttaaaatgtactattctttca
aaagtttgtgatggttatgcatcacttcagcatgtagcagcatcttgtga
cacatgtcaacccaatgtgacaagcagcatgaaaaatagatttgaatatg
ggaagaaataaatgcaggaatcaatgacttctggtggctgcagcaactgt
atagccctcgaagttgacaatttcatgttttatgcagagacagacactgg
ggtacacattgaggagtctatatcaaagtcatttgcattcaatgaaacat
tagatatagatggaaaaaatacaacataaatatttttctggggacat
gaattctcagtttgcatgtgatttatagaataggataggcagggctgggt
agattgttcatcgcctatgagtgctaaccaagcacgatgacacaagtttc
aaatgtgtcatccaggacaaaaagcaagcatggctctgcactttaggtta
atttttttttttaatgcttgattctgaaaatgcttttttattatgttctt
aatactttttattaactttatattctagttgctgtccccacacccagtgc
cccctcacacagtccctcacaccatccctcatccccttcttctctgaaag
agtgtaattccctgcctccactggtatctccaaccctggcacatcaactt
tctgcaggtctaggaacttcttctccaatggaggccagacaagacagtca
agttagaggaatggattccacagatagtcaacatctttagggatagccgc
cactccagttgttttggcaaccatgaagatcatggtcttctacatgacga
ccatgctgaatatctgctaaatatgtatatggggtgactaggtccagcct
gtgtatgctcttggtttgtggttcagtctatgaaaggccccaaaggtcca
ggttagttgattctcttggtcttcctgtggagctcctatcccctttagag
cccacaatccttctcccaactcttccataagagcccccaggctcaagcca
atgtttgggtatgggtctctgcatctgtgagtcagctactggatgacagc
catactaggctcctgtctgcaagcatagcagagtatcattaatagtgtca
gagattgggtggacagtctttttacaccagagatttgtggatttgtttgt
tggtttgttttgctgtgttgtgttttgtgtgttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_70275038_70276044
seq2: B6Ng01-010C16.b_43_1039

seq1  GAATTCACTTTTTTTTCTATAATTATTGCTGTGATATTCCTTTGACCTGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTTTTTTTTCTATAATTATTGCTGTGATATTCCTTTGACCTGG  50

seq1  AGTCTGCCTAGATTTCCATGGGTCACCAGGTTATAGCAAGCTCTGCCTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTGCCTAGATTTCCATGGGTCACCAGGTTATAGCAAGCTCTGCCTCT  100

seq1  TGCATTGTATCAATACAATTCTATAAGTGGAATATCCACACAAAAATTCG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATTGTATCAATACAATTCTATAAGTGGAATATCCACACAAAAATTCG  150

seq1  GGTGACAGCCATGTATCTACTCAGTCTCATTTGTGTGTGTATGTGTGTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGACAGCCATGTATCTACTCAGTCTCATTTGTGTGTGTATGTGTGTGT  200

seq1  GTATAGGTGAGTTTTATTGCAGGAACACATGAATAAATGTTATATTATTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATAGGTGAGTTTTATTGCAGGAACACATGAATAAATGTTATATTATTG  250

seq1  GATTAAAATGATTTTCTTTTCTTTTATAGTTCTCATTTTCTGTAACTCAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTAAAATGATTTTCTTTTCTTTTATAGTTCTCATTTTCTGTAACTCAT  300

seq1  AATAATTTTCAGAAAAGAGGCAAGACTTAAAAGATGAGAGAAATTGATCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATTTTCAGAAAAGAGGCAAGACTTAAAAGATGAGAGAAATTGATCC  350

seq1  TTTGTAAACGGAAGGATCTCCAGATAGCTCAAAGAAAATCAGTACTGCAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTAAACGGAAGGATCTCCAGATAGCTCAAAGAAAATCAGTACTGCAA  400

seq1  TTAAATGAGAATCCCAGGGACTGAAATGCAAGACTGTGATAACAAGACAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATGAGAATCCCAGGGACTGAAATGCAAGACTGTGATAACAAGACAA  450

seq1  AGGTTGAAAGGTTATTTTCTGCTAACTTTTCAATGCCATTTTTAAATGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTGAAAGGTTATTTTCTGCTAACTTTTCAATGCCATTTTTAAATGAA  500

seq1  CATTTCTACCTTAATGTATTTAAAATTTGCAAAAAATGAATCTGGAACTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTCTACCTTAATGTATTTAAAATTTGCAAAAAATGAATCTGGAACTC  550

seq1  TTTCTTTGATTTTTTGTTGTTACTTATTAGATTTTCTGGATCAAATTGAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTGATTTTTTGTTGTTACTTATTAGATTTTCTGGATCAAATTGAG  600

seq1  ATGTAATTAATTTATATTACTTCCATAAATGTTGGTACTTGATATTCGTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAATTAATTTATATTACTTCCATAAATGTTGGTACTTGATATTCGTC  650

seq1  TGTGTATATCAAAGTGAATGGAGAAACATTTAAAATGTACTATTCTTTCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTATATCAAAGTGAATGGAGAAACATTTAAAATGTACTATTCTTTCA  700

seq1  AAAGTTTGTGATGGTTATGCATCACTTCAGCATGTAGCAGCATCTTGTGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTTTGTGATGGTTATGCATCACTTCAGCATGTAGCAGCATCTTGTGA  750

seq1  CACATGTCAACCCAATGTGACAAGCAGCATGAAAAATAGATTTGAAATAT  800
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  CACATGTCAACCCAATGTGACAAGCAGCATGAAAAATAGATTTG-AATAT  799

seq1  -GGAAGAAATAAATGCAGGAATCAATGACTTCTGGTGGCTGCAGTCAACT  849
       ||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  GGGAAGAAATAAATGCAGGAATCAATGACTTCTGGTGGCTGCAG-CAACT  848

seq1  GTATAGCCCTCGGAAGTTGACAATTTCATGTTTTATGCAGGAGACAGACA  899
      ||||||||||| ||||||||||||||||||||||||||| ||||||||||
seq2  GTATAGCCCTC-GAAGTTGACAATTTCATGTTTTATGCA-GAGACAGACA  896

seq1  CTTGGGTAACACATTGAGGAGTCTATATTCAAAGTCATTTGCATTCAATG  949
      || |||| ||||||||||||||||||| ||||||||||||||||||||||
seq2  CTGGGGT-ACACATTGAGGAGTCTATA-TCAAAGTCATTTGCATTCAATG  944

seq1  AAACAATAGAATATAAGAATGTGAAAAAATAACAACAAAAATATTTTTCT  999
      ||||| ||| |||||   ||| |||||||| |||||| ||||||||||||
seq2  AAACATTAG-ATATA--GATG-GAAAAAAT-ACAACATAAATATTTTTCT  989

seq1  GGGGACAT  1007
      ||||||||
seq2  GGGGACAT  997

seq1: chr3_70418083_70418966
seq2: B6Ng01-010C16.g_63_946 (reverse)

seq1  AAACACACAAAACACAACACAGCAAAACAAACCAACAAACAAATCCACAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACACACAAAACACAACACAGCAAAACAAACCAACAAACAAATCCACAA  50

seq1  ATCTCTGGTGTAAAAAGACTGTCCACCCAATCTCTGACACTATTAATGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCTGGTGTAAAAAGACTGTCCACCCAATCTCTGACACTATTAATGAT  100

seq1  ACTCTGCTATGCTTGCAGACAGGAGCCTAGTATGGCTGTCATCCAGTAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTGCTATGCTTGCAGACAGGAGCCTAGTATGGCTGTCATCCAGTAGC  150

seq1  TGACTCACAGATGCAGAGACCCATACCCAAACATTGGCTTGAGCCTGGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTCACAGATGCAGAGACCCATACCCAAACATTGGCTTGAGCCTGGGG  200

seq1  GCTCTTATGGAAGAGTTGGGAGAAGGATTGTGGGCTCTAAAGGGGATAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTTATGGAAGAGTTGGGAGAAGGATTGTGGGCTCTAAAGGGGATAGG  250

seq1  AGCTCCACAGGAAGACCAAGAGAATCAACTAACCTGGACCTTTGGGGCCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCCACAGGAAGACCAAGAGAATCAACTAACCTGGACCTTTGGGGCCT  300

seq1  TTCATAGACTGAACCACAAACCAAGAGCATACACAGGCTGGACCTAGTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATAGACTGAACCACAAACCAAGAGCATACACAGGCTGGACCTAGTCA  350

seq1  CCCCATATACATATTTAGCAGATATTCAGCATGGTCGTCATGTAGAAGAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCATATACATATTTAGCAGATATTCAGCATGGTCGTCATGTAGAAGAC  400

seq1  CATGATCTTCATGGTTGCCAAAACAACTGGAGTGGCGGCTATCCCTAAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGATCTTCATGGTTGCCAAAACAACTGGAGTGGCGGCTATCCCTAAAG  450

seq1  ATGTTGACTATCTGTGGAATCCATTCCTCTAACTTGACTGTCTTGTCTGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTGACTATCTGTGGAATCCATTCCTCTAACTTGACTGTCTTGTCTGG  500

seq1  CCTCCATTGGAGAAGAAGTTCCTAGACCTGCAGAAAGTTGATGTGCCAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCATTGGAGAAGAAGTTCCTAGACCTGCAGAAAGTTGATGTGCCAGG  550

seq1  GTTGGAGATACCAGTGGAGGCAGGGAATTACACTCTTTCAGAGAAGAAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGAGATACCAGTGGAGGCAGGGAATTACACTCTTTCAGAGAAGAAGG  600

seq1  GGATGAGGGATGGTGTGAGGGACTGTGTGAGGGGGCACTGGGTGTGGGGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGAGGGATGGTGTGAGGGACTGTGTGAGGGGGCACTGGGTGTGGGGA  650

seq1  CAGCAACTAGAATATAAAGTTAATAAAAAGTATTAAGAACATAATAAAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAACTAGAATATAAAGTTAATAAAAAGTATTAAGAACATAATAAAAA  700

seq1  AGCATTTTCAGAATCAAGCATTAAAAAAAAAAATTAACCTAAAGTGCAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATTTTCAGAATCAAGCATTAAAAAAAAAAATTAACCTAAAGTGCAGA  750

seq1  GCCATGCTTGCTTTTTGTCCTGGATGACACATTTGAAACTTGTGTCATCG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATGCTTGCTTTTTGTCCTGGATGACACATTTGAAACTTGTGTCATCG  800

seq1  TGCTTGGTTAGCACTCATAGGCGATGAACAATCTACCCAGCCCTGCCTAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTGGTTAGCACTCATAGGCGATGAACAATCTACCCAGCCCTGCCTAT  850

seq1  CCTATTCTATAAATCACATGCAAACTGAGAATTC  884
      ||||||||||||||||||||||||||||||||||
seq2  CCTATTCTATAAATCACATGCAAACTGAGAATTC  884