BAC Information

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BAC

Clone NameB6Ng01-010L24
Chromosome3 (Build37)
Map Location 127,988,117 - 128,151,586
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100043361, LOC100043364, Larp7, 4930422G04Rik, Neurog2, Alpk1, T2bp, BC002199, 5730508B09Rik, LOC100043382, EG668828
Downstream geneLOC100043393, EG668831, Pitx2, Enpep, LOC100043415, LOC435755, LOC668840
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-010L24.bB6Ng01-010L24.g
ACCDH846328DH846329
length3091,012
definitionDH846328|Mus musculus domesticus DNA, BAC clone: B6Ng01-010L24, 5' end.DH846329|Mus musculus domesticus DNA, BAC clone: B6Ng01-010L24, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(127,988,117 - 127,988,425)(128,150,593 - 128,151,586)
sequence
ttcttagaagcctggtaccgtgacccccaaatttcacacttttttttaaa
tgctgggaagaaaacatagtttttctgggtttagtttataatagttggtg
gtgatatatgataagggtcgggtgtttatattagccatgtcaggattccc
ttaggtctataattaacacactcaccaaacactgttgaattccctgacta
atgtacccagccttttaagtgaccgacccagggttctgttgcttttcacc
ctcacccgactcctacatccacctttcccaaatattttatttggtattta
tcacttgca
gaattctcagagacagatcatatgttcggccaggatgcaagccccagctc
attgaagacaatggaaatcacatcttgcatgtctcaggtctccccaggat
gaaactagaaatgcgaaaaaggaggaaatgcagtaacagtgcagatacag
agaaacaaaggtcagctaatgaaaatgtaagtaattataaagcctcttga
aagaagtggagatacagcctacaaaagcactgaaatggagcaaaaacaga
tctaagtgggttgtttacaaaaagaaatgcctgcatcaaaaacaagtctc
aagttaaaaatctaacacaggcctgtcagtggttaggaacaatggtaact
ctttcagaggacccaggtttagttgccagaacctacatagtagcttacac
ccttctgttaacttcattcctgggggctcagggtcctattctgatcctca
aggataccaggcacacatgtgatacacagacatgtatataggcaaaacac
acatacacataaaacacaacatactagctttgcacctcagggagctaaaa
agatatgcaagagcataaactctataaatatttcaataaatagagaaaaa
gaacacgcatcaatagccaaactcaaaatcagtagaacttgcaagagtgc
acagatgaaaataagagcagggtcagaaaaaaacaaaacattaataaatg
cagaaggattggaccttttgaaaaatcaaaccaactcaatgcattttaaa
taatagtacaataattttaaataatagtacaatgaggggagagagagagg
gatgaggagagagagagagacctaaatcaaagatgaaagaatatggtgtt
aactgttgtgacaggaagaataaaggttatttacttacagtattgaacat
ttatttgccaacaaattagctaacatagaaaactaaatctgttacttggc
catatgtaaggtgacaagactgcatgtgaaaatgactttaacgaaagatt
taaagaagaaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_127988117_127988425
seq2: B6Ng01-010L24.b_52_360

seq1  TTCTTAGAAGCCTGGTACCGTGACCCCCAAATTTCACACTTTTTTTTAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTAGAAGCCTGGTACCGTGACCCCCAAATTTCACACTTTTTTTTAAA  50

seq1  TGCTGGGAAGAAAACATAGTTTTTCTGGGTTTAGTTTATAATAGTTGGTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGGGAAGAAAACATAGTTTTTCTGGGTTTAGTTTATAATAGTTGGTG  100

seq1  GTGATATATGATAAGGGTCGGGTGTTTATATTAGCCATGTCAGGATTCCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATATATGATAAGGGTCGGGTGTTTATATTAGCCATGTCAGGATTCCC  150

seq1  TTAGGTCTATAATTAACACACTCACCAAACACTGTTGAATTCCCTGACGA  200
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  TTAGGTCTATAATTAACACACTCACCAAACACTGTTGAATTCCCTGACTA  200

seq1  ATGTACCCAGCCTTTTAAGTGACCGACCCAGGGTTCTGTTGCTTTTCACC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTACCCAGCCTTTTAAGTGACCGACCCAGGGTTCTGTTGCTTTTCACC  250

seq1  CTCACCCGACTCCTACATCCACCTTTCCCAAATATTTTATTTGGCATTTA  300
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  CTCACCCGACTCCTACATCCACCTTTCCCAAATATTTTATTTGGTATTTA  300

seq1  TCACATGCA  309
      |||| ||||
seq2  TCACTTGCA  309

seq1: chr3_128150593_128151586
seq2: B6Ng01-010L24.g_90_1078 (reverse)

seq1  TTTTCTTTTTTAAATCTATTCGTTAAATGTCCACTCTTTCACATGCAGTC  50
      ||||||| ||||||||| ||||||||| ||   |  ||||||||||||||
seq2  TTTTCTTCTTTAAATCT-TTCGTTAAA-GT---CATTTTCACATGCAGTC  45

seq1  TTGTCACCTTACATATGGCCAGGT-ACAGATTTAGTTTTTCTATGTTAGC  99
      ||||||||||||||||||||| || |||||||||| ||||||||||||||
seq2  TTGTCACCTTACATATGGCCAAGTAACAGATTTAG-TTTTCTATGTTAGC  94

seq1  TAATTTGTTGGCAAATAAATGTTCATAACTGTAAGTAAAATAACCTTTAT  149
      |||||||||||||||||||||||||  ||||||||| |||||||||||||
seq2  TAATTTGTTGGCAAATAAATGTTCAATACTGTAAGT-AAATAACCTTTAT  143

seq1  TCTTCCTGTCACAACAGTT-ACACCATATTCTTTCATCTTTGATTTAGGT  198
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  TCTTCCTGTCACAACAGTTAACACCATATTCTTTCATCTTTGATTTAGGT  193

seq1  CTCTCTCTCTCTCCTCATCCCTCTCTCTCTCCCCTCATTGTACTATTATT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTCTCTCTCCTCATCCCTCTCTCTCTCCCCTCATTGTACTATTATT  243

seq1  TAAAATTATTGTACTATTATTTAAAATGCATTGAGTTGGTTTGATTTTTC  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATTATTGTACTATTATTTAAAATGCATTGAGTTGGTTTGATTTTTC  293

seq1  AAAAGGTCCAATCCTTCTGCATTTATTAATGTTTTGTTTTTTTCTGACCC  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGGTCCAATCCTTCTGCATTTATTAATGTTTTGTTTTTTTCTGACCC  343

seq1  TGCTCTTATTTTCATCTGTGCACTCTTGCAAGTTCTACTGATTTTGAGTT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCTTATTTTCATCTGTGCACTCTTGCAAGTTCTACTGATTTTGAGTT  393

seq1  TGGCTATTGATGCGTGTTCTTTTTCTCTATTTATTGAAATATTTATAGAG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTATTGATGCGTGTTCTTTTTCTCTATTTATTGAAATATTTATAGAG  443

seq1  TTTATGCTCTTGCATATCTTTTTAGCTCCCTGAGGTGCAAAGCTAGTATG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATGCTCTTGCATATCTTTTTAGCTCCCTGAGGTGCAAAGCTAGTATG  493

seq1  TTGTGTTTTATGTGTATGTGTGTTTTGCCTATATACATGTCTGTGTATCA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGTTTTATGTGTATGTGTGTTTTGCCTATATACATGTCTGTGTATCA  543

seq1  CATGTGTGCCTGGTATCCTTGAGGATCAGAATAGGACCCTGAGCCCCCAG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTGTGCCTGGTATCCTTGAGGATCAGAATAGGACCCTGAGCCCCCAG  593

seq1  GAATGAAGTTAACAGAAGGGTGTAAGCTACTATGTAGGTTCTGGCAACTA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGAAGTTAACAGAAGGGTGTAAGCTACTATGTAGGTTCTGGCAACTA  643

seq1  AACCTGGGTCCTCTGAAAGAGTTACCATTGTTCCTAACCACTGACAGGCC  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTGGGTCCTCTGAAAGAGTTACCATTGTTCCTAACCACTGACAGGCC  693

seq1  TGTGTTAGATTTTTAACTTGAGACTTGTTTTTGATGCAGGCATTTCTTTT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTTAGATTTTTAACTTGAGACTTGTTTTTGATGCAGGCATTTCTTTT  743

seq1  TGTAAACAACCCACTTAGATCTGTTTTTGCTCCATTTCAGTGCTTTTGTA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAACAACCCACTTAGATCTGTTTTTGCTCCATTTCAGTGCTTTTGTA  793

seq1  GGCTGTATCTCCACTTCTTTCAAGAGGCTTTATAATTACTTACATTTTCA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGTATCTCCACTTCTTTCAAGAGGCTTTATAATTACTTACATTTTCA  843

seq1  TTAGCTGACCTTTGTTTCTCTGTATCTGCACTGTTACTGCATTTCCTCCT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCTGACCTTTGTTTCTCTGTATCTGCACTGTTACTGCATTTCCTCCT  893

seq1  TTTTCGCATTTCTAGTTTCATCCTGGGGAGACCTGAGACATGCAAGATGT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCGCATTTCTAGTTTCATCCTGGGGAGACCTGAGACATGCAAGATGT  943

seq1  GATTTCCATTGTCTTCAATGAGCTGGGGCTTGCATCCTGGCCGAAC  994
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTCCATTGTCTTCAATGAGCTGGGGCTTGCATCCTGGCCGAAC  989