BAC Information

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BAC

Clone NameB6Ng01-010O11
Chromosome3 (Build37)
Map Location 79,170,820 - 79,339,666
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100041691, LOC383883, LOC100041748, LOC100041716, LOC100041725, LOC100041766, Rapgef2, LOC100041741
Downstream geneLOC100041793, LOC667613, Ppid, Etfdh, 4930579G24Rik, Rxfp1, Tmem144, 1110032E23Rik, EG626797
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-010O11.bB6Ng01-010O11.g
ACCDH846438DH846439
length6921,129
definitionDH846438|Mus musculus domesticus DNA, BAC clone: B6Ng01-010O11, 5' end.DH846439|Mus musculus domesticus DNA, BAC clone: B6Ng01-010O11, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(79,338,975 - 79,339,666)(79,170,820 - 79,171,945)
sequence
gaattctccttactcttcatcaggtgtggaaactcacagtcccctggtgt
ccagtcttagagttcaggtggtcctgcagcagtggactgaatggttgtgg
agaagactccatgtatgacaggaaacagtgctgtggacggtcagagattc
ttattaaaggcagcaggcacattgagtaccattgctatctgagtgatgtg
ccgttcattggtagaaacttgctgttctgtagggccgcttcagtgcctgg
gatttgtgaatggaaacagtgcaacagcagtttaaactcctgagaggccg
ggcctgtgttcggagtagcacatatatagcatttgtgaggtcctggtgtc
aaccccatcaccaaaaactataacctgtatccattcctctcagatattgc
agggcttcattgtacctcagtactctctggccctgcctcctaacattggg
agtttgctgtgctatgacccagccagtgaggcagcagaggttgcaggcag
tgtgctgagctgtggggtctagtcagtgactgcggatgattttaggtact
ctttcttttctgtaatgtgtgggtgagctttgtgaggaagatagggaagg
gccatgagtagggctacaaataaaactggtggtggcgcacgcctttaatc
ccagcactcaggaggcagaggcaggcggatttctgagttcaa
gaattccatcttttctttgagggagttgagatcctgctgaattgtggact
atgtgtgtgtgtgttgctttgtgtgaagaaatgtaaaaagctgttagtgt
taatgtatatcttgtttaggatcctcctgtatcattgttcaatgaatgag
tttttgccacaggcatctgctaaccctgggaggtctgcgccctggctttg
agaagctgcaggtaacaaatctaccagggagtgtggttctacccttatgg
tttggtgctcagggctgtagatgtcctgtcccatgcatcttcatgtggaa
ggctttcttctttgctcccttgttgtcattttcttcaagtgatctcagag
gacaactccagaaggctaagatgcttacacacaacctccaccctttaatt
cctgcactggtgaggcagaagcaggaggttttctgtgagtttgaggccaa
ccagtctggtctacatagcaagtttcaggtcagtagggctacatagtgag
aacctgtctcaacaaaacaaaacaaaaacaaaaacaaaaacccaccaact
aaaaacactatctccaaattagaataagaatttgttcaattatttcccta
taatgatatgacacaaattagaactacacatgcaagtagccacatgacca
ctatgcatccccttccatcacagagtgccttaatggagaatattggcaag
tagaaccagacatgatgttgtcattgtacccacatgaaaattatgtattg
tggaaaaagcagaaccatctattatttggttcagagaacagttccagcaa
gaactaaaaagaaagaaagaaactgttcacctaacatgactcaaagcagg
tgtcctttctccagaatctaaactctataccaggtgagtggataacattt
tgaacaagtgactctaccacaaagcttcttttaaaagtggcttctgcctg
atcagtgagtccagcatcctgctcatcttagccaccctagaaaaagagct
cttctcgcattcagcaaggtgactggagtctctcagcccatgtcttaccc
tgcccatactccatttcttcacctcctttttttctgtgattcaaagatgg
agagacaagaaataaactgcaagtgagaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_79338975_79339666
seq2: B6Ng01-010O11.b_43_734 (reverse)

seq1  TTGAACTCAGAAATCCGCCTGCCTCTGCCTCCTGAGTGCTGGGATTAAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAACTCAGAAATCCGCCTGCCTCTGCCTCCTGAGTGCTGGGATTAAAG  50

seq1  GCGTGCGCCACCACCAGTTTTATTTGTAGCCCTACTCATGGCCCTTCCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGTGCGCCACCACCAGTTTTATTTGTAGCCCTACTCATGGCCCTTCCCT  100

seq1  ATCTTCCTCACAAAGCTCACCCACACATTACAGAAAAGAAAGAGTACCTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTCCTCACAAAGCTCACCCACACATTACAGAAAAGAAAGAGTACCTA  150

seq1  AAATCATCCGCAGTCACTGACTAGACCCCACAGCTCAGCACACTGCCTGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCATCCGCAGTCACTGACTAGACCCCACAGCTCAGCACACTGCCTGC  200

seq1  AACCTCTGCTGCCTCACTGGCTGGGTCATAGCACAGCAAACTCCCAATGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTCTGCTGCCTCACTGGCTGGGTCATAGCACAGCAAACTCCCAATGT  250

seq1  TAGGAGGCAGGGCCAGAGAGTACTGAGGTACAATGAAGCCCTGCAATATC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGAGGCAGGGCCAGAGAGTACTGAGGTACAATGAAGCCCTGCAATATC  300

seq1  TGAGAGGAATGGATACAGGTTATAGTTTTTGGTGATGGGGTTGACACCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAGGAATGGATACAGGTTATAGTTTTTGGTGATGGGGTTGACACCAG  350

seq1  GACCTCACAAATGCTATATATGTGCTACTCCGAACACAGGCCCGGCCTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTCACAAATGCTATATATGTGCTACTCCGAACACAGGCCCGGCCTCT  400

seq1  CAGGAGTTTAAACTGCTGTTGCACTGTTTCCATTCACAAATCCCAGGCAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAGTTTAAACTGCTGTTGCACTGTTTCCATTCACAAATCCCAGGCAC  450

seq1  TGAAGCGGCCCTACAGAACAGCAAGTTTCTACCAATGAACGGCACATCAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGCGGCCCTACAGAACAGCAAGTTTCTACCAATGAACGGCACATCAC  500

seq1  TCAGATAGCAATGGTACTCAATGTGCCTGCTGCCTTTAATAAGAATCTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGATAGCAATGGTACTCAATGTGCCTGCTGCCTTTAATAAGAATCTCT  550

seq1  GACCGTCCACAGCACTGTTTCCTGTCATACATGGAGTCTTCTCCACAACC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCGTCCACAGCACTGTTTCCTGTCATACATGGAGTCTTCTCCACAACC  600

seq1  ATTCAGTCCACTGCTGCAGGACCACCTGAACTCTAAGACTGGACACCAGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAGTCCACTGCTGCAGGACCACCTGAACTCTAAGACTGGACACCAGG  650

seq1  GGACTGTGAGTTTCCACACCTGATGAAGAGTAAGGAGAATTC  692
      ||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTGTGAGTTTCCACACCTGATGAAGAGTAAGGAGAATTC  692

seq1: chr3_79170820_79171945
seq2: B6Ng01-010O11.g_68_1196

seq1  GAATTCCATCTTTTCTTTGAGGGAGTTGAGATCCTGCTGAATTGTGGACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATCTTTTCTTTGAGGGAGTTGAGATCCTGCTGAATTGTGGACT  50

seq1  ATGTGTGTGTGTGTTGCTTTGTGTGAAGAAATGTAAAAAGCTGTTAGTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGTGTGTGTGTTGCTTTGTGTGAAGAAATGTAAAAAGCTGTTAGTGT  100

seq1  TAATGTATATCTTGTTTAGGATCCTCCTGTATCATTGTTCAATGAATGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGTATATCTTGTTTAGGATCCTCCTGTATCATTGTTCAATGAATGAG  150

seq1  TTTTTGCCACAGGCATCTGCTAACCCTGGGAGGTCTGCGCCCTGGCTTTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGCCACAGGCATCTGCTAACCCTGGGAGGTCTGCGCCCTGGCTTTG  200

seq1  AGAAGCTGCAGGTAACAAATCTACCAGGGAGTGTGGTTCTACCCTTATGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGCTGCAGGTAACAAATCTACCAGGGAGTGTGGTTCTACCCTTATGG  250

seq1  TTTGGTGCTCAGGGCTGTAGATGTCCTGTCCCATGCATCTTCATGTGGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGTGCTCAGGGCTGTAGATGTCCTGTCCCATGCATCTTCATGTGGAA  300

seq1  GGCTTTCTTCTTTGCTCCCTTGTTGTCATTTTCTTCAAGTGATCTCAGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTTCTTCTTTGCTCCCTTGTTGTCATTTTCTTCAAGTGATCTCAGAG  350

seq1  GACAACTCCAGAAGGCTAAGATGCTTACACACAACCTCCACCCTTTAATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAACTCCAGAAGGCTAAGATGCTTACACACAACCTCCACCCTTTAATT  400

seq1  CCTGCACTGGTGAGGCAGAAGCAGGAGGTTTTCTGTGAGTTTGAGGCCAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCACTGGTGAGGCAGAAGCAGGAGGTTTTCTGTGAGTTTGAGGCCAA  450

seq1  CCAGTCTGGTCTACATAGCAAGTTTCAGGTCAGTAGGGCTACATAGTGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTCTGGTCTACATAGCAAGTTTCAGGTCAGTAGGGCTACATAGTGAG  500

seq1  AACCTGTCTCAACAAAACAAAACAAAAACAAAAACAAAAACCCACCAACT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTGTCTCAACAAAACAAAACAAAAACAAAAACAAAAACCCACCAACT  550

seq1  AAAAACACTATCTCCAAATTAGAATAAGAATTTGTTCAATTATTTCCCTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACACTATCTCCAAATTAGAATAAGAATTTGTTCAATTATTTCCCTA  600

seq1  TAATGATATGACACAAATTAGAACTACACATGCAAGTAGCCACATGACCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGATATGACACAAATTAGAACTACACATGCAAGTAGCCACATGACCA  650

seq1  CTATGCATCCCCTTCCATCACAGAGTGCCTTAATGGAGAATATTGGCAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGCATCCCCTTCCATCACAGAGTGCCTTAATGGAGAATATTGGCAAG  700

seq1  TAGAACCAGACATGATGTTGTCATTGTACCCACATGAAAATTATGTATTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAACCAGACATGATGTTGTCATTGTACCCACATGAAAATTATGTATTG  750

seq1  TGGAAAAAGCAAGAACCATCTATTA-TTAGTTCAGAGAACAGTTCCAGCA  799
      |||||||||| |||||||||||||| || |||||||||||||||||||| 
seq2  TGGAAAAAGC-AGAACCATCTATTATTTGGTTCAGAGAACAGTTCCAGC-  798

seq1  AAGAACTAAAAAGAAAGAAAGAAACTGTTCACCTAACATGACTCAAAGCA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAACTAAAAAGAAAGAAAGAAACTGTTCACCTAACATGACTCAAAGCA  848

seq1  GGTGTCCTTTCTCCAGAATCTAAACTCTATACCAGGTGAGTGGATAACAT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTCCTTTCTCCAGAATCTAAACTCTATACCAGGTGAGTGGATAACAT  898

seq1  TTTGAACAAGTGACTCTAACACAAAGCCTC-TTTAAAAGTGGCTTCTGCC  948
      |||||||||||||||||| |||||||| || |||||||||||||||||||
seq2  TTTGAACAAGTGACTCTACCACAAAGCTTCTTTTAAAAGTGGCTTCTGCC  948

seq1  TGATCAGTGAGTCCAGCATCCTGCTCATCCTAG-CAACCTAGAGAGAGA-  996
      ||||||||||||||||||||||||||||| ||| || |||||| | ||| 
seq2  TGATCAGTGAGTCCAGCATCCTGCTCATCTTAGCCACCCTAGAAAAAGAG  998

seq1  CTCTTCT-GCATTCAGC-AGGTGACTGGAG-CTCTCAGCCCATGTCTATC  1043
      ||||||| ||||||||| |||||||||||| ||||||||||||||||  |
seq2  CTCTTCTCGCATTCAGCAAGGTGACTGGAGTCTCTCAGCCCATGTCTTAC  1048

seq1  CCTGCCCATACT-CACTTCTCCACCTCCTTTCTCTCCTGCAGTTCCAAAG  1092
      |||||||||||| || |||| |||||||||| | | |||   |||  || 
seq2  CCTGCCCATACTCCATTTCTTCACCTCCTTT-TTTTCTGTGATTC--AAA  1095

seq1  GATGGGAGGACAAGGATAAAACTGCAAGTGAGAA  1126
      |||||   |||||| |  ||||||||||||||||
seq2  GATGGAGAGACAAGAAATAAACTGCAAGTGAGAA  1129