BAC Information

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BAC

Clone NameB6Ng01-011B05
Chromosome3 (Build37)
Map Location 21,544,339 - 21,653,916
singlet/doubletdoublet
Overlap gene7530428D23Rik
Upstream geneEG665094, LOC100040325
Downstream geneLOC100039465, LOC100040353, Tbl1xr1, LOC545506, LOC675593, LOC100040378
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-011B05.bB6Ng01-011B05.g
ACCDH846562DH846563
length1,102892
definitionDH846562|Mus musculus domesticus DNA, BAC clone: B6Ng01-011B05, 5' end.DH846563|Mus musculus domesticus DNA, BAC clone: B6Ng01-011B05, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(21,652,871 - 21,653,916)(21,544,339 - 21,545,233)
sequence
gaattctcagctgaggaatactgaatggctgagaagtacttaaagaaatg
ttcaacatccttaatcaccagggaaatgcaaatcaaaacaaccctgatat
tccacctcacaccagtcagaatggctaagatgaaaaactcaggtgacagc
agatgctggccaggatatagagaatgaggaacactcctctactgttgttg
ggattgtatgctggtacaaccactctggaagtcaatctggcaattcctca
gaaaattggacatagtaccacctgaggacccatttataactctcgtgggc
atatcccaaaagattctctaacacataataatgatacatgctccactctg
ttcatagcagccttatttatagtagtcagaagctggaaagaacccagatg
tccttcaaaagatgaatggatagagaaaatgtggtacatttacacaatgg
agtactactcagccattaaaaacaatgaattcataaaattcttaggcaaa
tggatacagttagaaaatatcattctgaatgaggtaatccagtcacaaaa
gaacacacatgctatgtactttcttccccacccccatgggaaaaattctc
atcattttatttaagttcacattaatgataacttctgagaaatcaaagtt
ataaacagaagcaattaattgctacctaaagatttcaaactatttttttt
tcctctcatccacaggtcggtctacccatagatagccctggccatttgac
attcgctaccactgggtagaaatattgtgtaacacattcatggttcccag
cacaaacgctaatgtgtctaatccaatgtgtccattttgatgaagacaaa
ggtgctactctgttgaaacacgttcacatattagagtcaaagtccagtgt
aaatcaccagtgtccatgtatagttaaagacaagtaaccatcccattgat
aatttcccaaatcaaccaatcacatatacaatgctgatcaactaagtact
actgaggaaacccatgcttatactagtttcccttgagccgtctctagaaa
tgtagggtcgcactgctcattcatctctgttttctgtctcagagcatgaa
ca
gaattccccacagtatgtagttggcacagtgaccacagaagaaatctcac
cctctattggcaagttttctaccactaaagctattttcacagtgatgtta
acagtaagggagactggaaaggagggaggatgcaggaatgaggaagtaga
tggaaggagggaactatgtcctccacttttgttttgtaggagccaggtga
ggtacagtttttctaagggttgaatacaagatgtcaaatgttaggactgg
gtccgaggcacaagtttgtgcagacctaagaaggaagtccccaagcaggc
tgtcagtgccccacagcttagcaacagagatgcacagaagcagatagaat
ctaaaatcagagtaggcaaaaagatgacagaaaaagtacactgccccact
gggagcaggggacagagggcagtcaatacatttaatgaattttgggttcc
tttttaagaagagcggagatgtggggggaaaaagttaatctagggtttgg
gacacccgtgtaaagcaatgtgagggctaattgggactaagcgcacagct
aaagtctgactcccttttcaaccatttgccttggaagagacttcacaaaa
cttagcatgagggacctgggctatttgttatcctcagagttcttgaacaa
ttatatctccttgggagtggtgaacagggaaataggatgtataagagtct
gagatttgcaaaaacttcacctaggcttggcagaactcccgagcgggaga
atctcccagattctgctttttctttaccactaaatggaagcctcccacag
actaggttctgtattttaaatacaggtggagtttgccaatagtttaatta
tttttggaacaaatggtatcttcaaattgatgggtttttttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_21652871_21653916
seq2: B6Ng01-011B05.b_114_1146 (reverse)

seq1  TGTTCATGCTCCTGGAGACAGAAAACAGAAGAAAGGAAATGAGGCAGTGC  50
      |||||||||||   |||||||||||||| |||     ||||| |||||||
seq2  TGTTCATGCTC--TGAGACAGAAAACAG-AGA---TGAATGA-GCAGTGC  43

seq1  GACCCTACCATTTCCTAGAGACGGCCTCAAGGGAAACTAGTATAAGCATG  100
      ||||||| ||||| |||||||||| |||||||||||||||||||||||||
seq2  GACCCTA-CATTT-CTAGAGACGG-CTCAAGGGAAACTAGTATAAGCATG  90

seq1  GGTTTCCTCAAGTTAGTACTTAGTTGATCAGCATTGTATATGTGATTGGT  150
      ||||||||||   |||||||||||||||||||||||||||||||||||| 
seq2  GGTTTCCTCA--GTAGTACTTAGTTGATCAGCATTGTATATGTGATTGG-  137

seq1  TTGATTTGGGAAATTATCAATGGGATGGTTACTTGTCTTTAACTATACAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATTTGGGAAATTATCAATGGGATGGTTACTTGTCTTTAACTATACAT  187

seq1  GGACACTGGTGATTTACACTGGACTTTGACTCTAATATGTGAACGTGTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACACTGGTGATTTACACTGGACTTTGACTCTAATATGTGAACGTGTTT  237

seq1  CAACAGAGTAGCACCTTTGTCTTCATCAAAATGGACACATTGGATTAGAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAGAGTAGCACCTTTGTCTTCATCAAAATGGACACATTGGATTAGAC  287

seq1  ACATTAGCGTTTGTGCTGGGAACCATGAATGTGTTACACAATATTTCTAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTAGCGTTTGTGCTGGGAACCATGAATGTGTTACACAATATTTCTAC  337

seq1  CCAGTGGTAGCGAATGTCAAATGGCCAGGGCTATCTATGGGTAGACCGAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTGGTAGCGAATGTCAAATGGCCAGGGCTATCTATGGGTAGACCGAC  387

seq1  CTGTGGATGAGAGGAAAAAAAAATAGTTTGAAATCTTTAGGTAGCAATTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGGATGAGAGGAAAAAAAAATAGTTTGAAATCTTTAGGTAGCAATTA  437

seq1  ATTGCTTCTGTTTATAACTTTGATTTCTCAGAAGTTATCATTAATGTGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCTTCTGTTTATAACTTTGATTTCTCAGAAGTTATCATTAATGTGAA  487

seq1  CTTAAATAAAATGATGAGAATTTTTCCCATGGGGGTGGGGAAGAAAGTAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAATAAAATGATGAGAATTTTTCCCATGGGGGTGGGGAAGAAAGTAC  537

seq1  ATAGCATGTGTGTTCTTTTGTGACTGGATTACCTCATTCAGAATGATATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCATGTGTGTTCTTTTGTGACTGGATTACCTCATTCAGAATGATATT  587

seq1  TTCTAACTGTATCCATTTGCCTAAGAATTTTATGAATTCATTGTTTTTAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAACTGTATCCATTTGCCTAAGAATTTTATGAATTCATTGTTTTTAA  637

seq1  TGGCTGAGTAGTACTCCATTGTGTAAATGTACCACATTTTCTCTATCCAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTGAGTAGTACTCCATTGTGTAAATGTACCACATTTTCTCTATCCAT  687

seq1  TCATCTTTTGAAGGACATCTGGGTTCTTTCCAGCTTCTGACTACTATAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCTTTTGAAGGACATCTGGGTTCTTTCCAGCTTCTGACTACTATAAA  737

seq1  TAAGGCTGCTATGAACAGAGTGGAGCATGTATCATTATTATGTGTTAGAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGCTGCTATGAACAGAGTGGAGCATGTATCATTATTATGTGTTAGAG  787

seq1  AATCTTTTGGGATATGCCCACGAGAGTTATAAATGGGTCCTCAGGTGGTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTTTTGGGATATGCCCACGAGAGTTATAAATGGGTCCTCAGGTGGTA  837

seq1  CTATGTCCAATTTTCTGAGGAATTGCCAGATTGACTTCCAGAGTGGTTGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGTCCAATTTTCTGAGGAATTGCCAGATTGACTTCCAGAGTGGTTGT  887

seq1  ACCAGCATACAATCCCAACAACAGTAGAGGAGTGTTCCTCATTCTCTATA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGCATACAATCCCAACAACAGTAGAGGAGTGTTCCTCATTCTCTATA  937

seq1  TCCTGGCCAGCATCTGCTGTCACCTGAGTTTTTCATCTTAGCCATTCTGA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGGCCAGCATCTGCTGTCACCTGAGTTTTTCATCTTAGCCATTCTGA  987

seq1  CTGGTGTGAGGTGGAATATCAGGGTTGTTTTGATTTGCATTTCCCT  1046
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTGTGAGGTGGAATATCAGGGTTGTTTTGATTTGCATTTCCCT  1033

seq1: chr3_21544339_21545233
seq2: B6Ng01-011B05.g_66_957

seq1  GAATTCCCCACAGTATGTAGTTGGCACAGTGACCACAGAAGAAATCTCAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCCACAGTATGTAGTTGGCACAGTGACCACAGAAGAAATCTCAC  50

seq1  CCTCTATTGGCAAGTTTTCTACCACTAAAGCTATTTTCACAGTGATGTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTATTGGCAAGTTTTCTACCACTAAAGCTATTTTCACAGTGATGTTA  100

seq1  ACAGTAAGGGAGACTGGAAAGGAGGGAGGATGCAGGAATGAGGAAGTAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTAAGGGAGACTGGAAAGGAGGGAGGATGCAGGAATGAGGAAGTAGA  150

seq1  TGGAAGGAGGGAACTATGTCCTCCACTTTTGTTTTGTAGGAGCCAGGTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAGGAGGGAACTATGTCCTCCACTTTTGTTTTGTAGGAGCCAGGTGA  200

seq1  GGTACAGTTTTTCTAAGGGTTGAATACAAGATGTCAAATGTTAGGACTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTACAGTTTTTCTAAGGGTTGAATACAAGATGTCAAATGTTAGGACTGG  250

seq1  GTCCGAGGCACAAGTTTGTGCAGACCTAAGAAGGAAGTCCCCAAGCAGGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCGAGGCACAAGTTTGTGCAGACCTAAGAAGGAAGTCCCCAAGCAGGC  300

seq1  TGTCAGTGCCCCACAGCTTAGCAACAGAGATGCACAGAAGCAGATAGAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCAGTGCCCCACAGCTTAGCAACAGAGATGCACAGAAGCAGATAGAAT  350

seq1  CTAAAATCAGAGTAGGCAAAAAGATGACAGAAAAAGTACACTGCCCCACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAATCAGAGTAGGCAAAAAGATGACAGAAAAAGTACACTGCCCCACT  400

seq1  GGGAGCAGGGGACAGAGGGCAGTCAATACATTTAATGAATTTTGGGTTCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGCAGGGGACAGAGGGCAGTCAATACATTTAATGAATTTTGGGTTCC  450

seq1  TTTTTAAGAAGAGCGGAGATGTGGGGGGAAAAAGTTAATCTAGGGTTTGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTAAGAAGAGCGGAGATGTGGGGGGAAAAAGTTAATCTAGGGTTTGG  500

seq1  GACACCCGTGTAAAGCAATGTGAGGGCTAATTGGGACTAAGCGCACAGCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACCCGTGTAAAGCAATGTGAGGGCTAATTGGGACTAAGCGCACAGCT  550

seq1  AAAGTCTGACTCCCTTTTCAACCATTTGCCTTGGAAGAGACTTCACAAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTCTGACTCCCTTTTCAACCATTTGCCTTGGAAGAGACTTCACAAAA  600

seq1  CTTAGCATGAGGGACCTGGGCTATTTGTTATCCTCAGAGTTCTTGAACAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGCATGAGGGACCTGGGCTATTTGTTATCCTCAGAGTTCTTGAACAA  650

seq1  TTATATCTCCTTGGGAGTGGTGAACA-GGAAATAGGATGTATAAGAGTCT  699
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  TTATATCTCCTTGGGAGTGGTGAACAGGGAAATAGGATGTATAAGAGTCT  700

seq1  GAGATTTGCAAAAACTTCACCTAGGCTTGGCAGAACTCCCGAGCGGTAGA  749
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  GAGATTTGCAAAAACTTCACCTAGGCTTGGCAGAACTCCCGAGCGGGAGA  750

seq1  ATCTCCCCAGATTCTGC-TTTGCTTTACCACTAAATGGAAGCCTCCAACA  798
      |||| |||||||||||| ||| |||||||||||||||||||||||| |||
seq2  ATCT-CCCAGATTCTGCTTTTTCTTTACCACTAAATGGAAGCCTCCCACA  799

seq1  GACTATGTTCTGTATTTTAAATACAGGCTGGAGTTTGCCAAGAGTTTAAT  848
      ||||| ||||||||||||||||||||| ||||||||||||| ||||||| 
seq2  GACTAGGTTCTGTATTTTAAATACAGG-TGGAGTTTGCCAATAGTTTAA-  847

seq1  TTATATTTTGGACAAAATGGTATCATCAAAATTGATGGGTTTTTTTT  895
      |||| |||||||  |||||||||| || |||||||||||||||||||
seq2  TTAT-TTTTGGAACAAATGGTATCTTC-AAATTGATGGGTTTTTTTT  892