BAC Information

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BAC

Clone NameB6Ng01-011G23
Chromosome3 (Build37)
Map Location 22,551,313 - 22,668,361
singlet/doubletdoublet
Overlap geneLOC100040378
Upstream gene7530428D23Rik, LOC100039465, LOC100040353, Tbl1xr1, LOC545506, LOC675593
Downstream geneLOC623751, LOC100039548
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-011G23.bB6Ng01-011G23.g
ACCDH846821DH846822
length1,138655
definitionDH846821|Mus musculus domesticus DNA, BAC clone: B6Ng01-011G23, 5' end.DH846822|Mus musculus domesticus DNA, BAC clone: B6Ng01-011G23, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(22,667,206 - 22,668,361)(22,551,313 - 22,551,965)
sequence
gaattccacactaggtagagtttaagaaagcagacctcaaaaccctctcc
cacagtaacacaagtcctccaataaagacacgcctactccaacgaagcct
cacctcctaatagtgtcatttcctgtgggcaaacacatgaatccatggag
gccaaacctattcaaagtaccatggtgtatgtgcatgtgtatgccagttg
acacatgtacaaggcaactaatacatgttgacatatatggagggcagaag
tcaattcaggtgatggttatctggtactatccaccttggtttagaatcat
gatatcgcaatatgatgtagatctgagaattatccaaggctggttggcca
atgagcctcaggagttctgtttatttctccctagcacagggattacaaat
gcatgccacagttggatatttacataggttctatgggttcaactttagtg
tttatgcttttgaagtgagcaatctactgactgaactatccctcaagtcc
attgattaactttttcattgaaatttatataagtgcaatcatacagagag
tcatgagaggaatcaaactccctaggacactggggcagagcttaagaact
tttaaatgttgttggaaatgttagcgttgtgtgagttctctagactttta
gcatgagcaccctttgaaaactaccagaagtaggctagttgggcctttga
atggcaatatacaaacctttcattattacagacaagagcacagaaccatc
atctgagctgccctctatctggaaacaacccctcttctatcccaacagca
cagctgttttgaacactctgatcacttggagaaccttgcagttgagtaga
cctctgaaacaaagcctcagtgcctactccaggaagccttgcccagtatg
actactccaggcagcctttctagccttagatggcaggtattccaagcaac
acagttattggtgaccattagataacccagagtctgtgtttcaagatgaa
acagtcactttccagtaactaaatgaaagctgatgactgatatgactgat
atgactgacacgggtgtcttcagtcaatgccactggggttgcaaatggcc
tagtaagtcttttcccaattgaaattccttgccaactt
gaattctctaggctttttgtatgttcatgggcatctctttctttaggttt
gggaagttttcatctataattttgttgaagatatttgctggacctttaag
ttgaatatcttcattctcatctactattatcagtaggtttggccttctta
tttttttttcttttttttattatatatttatatactttttattagatatt
ttcttcatttacatttcaaatgctctccccaaagccccctatacaccccc
cgccctggtccctgctccccacccacccactcccgcttcctggccctggc
tttcccctgtactggggcatatgatctttgcaatacttttagatacttat
atacttttatatacttttagtccttgcatacatattaagttttggatcta
ttacaaaggaggatatgaagagttttattaattatcttttttgtttgttt
gttttttgttttttttttcttcccattttttattaggtatttagctcatt
tacatttccaatgctataccaaaagaacctcatacccacccacccccact
cccctacccgcccactttcccttaatggccctggcgttctcctgttctgg
ggcatataaagtttgtgtgttacaatgggccctctcattccattgatggt
cgact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_22667206_22668361
seq2: B6Ng01-011G23.b_49_1186 (reverse)

seq1  AAGTTGGCAAAGAAAATACTATTTGGGAAAAGACTTTTACTAGGCCCAAT  50
      |||||||||| |  |||   | ||||||||||||  ||||||||||  ||
seq2  AAGTTGGCAAGG--AATTTCAATTGGGAAAAGAC--TTACTAGGCC--AT  44

seq1  GTTGCAACACCAGTGGGCAATGGACTAGAAGACAACTCTGTTGTCAGTCA  100
       ||||||| |||||||   || |||| |||||||   |   |||||||||
seq2  -TTGCAACCCCAGTGG--CATTGACT-GAAGACA---CCCGTGTCAGTCA  87

seq1  TATCAGTCATATCAGTCATCAGCTTTTCATTTAGTTACTGGGAAAGTGAA  150
      ||||||||||||||||||||||| ||||||||||||||| |||||||| |
seq2  TATCAGTCATATCAGTCATCAGC-TTTCATTTAGTTACT-GGAAAGTG-A  134

seq1  CTGTTTCATCTTGAAACACAGACTTCTGGGTTATCTAATGGTCACCAAT-  199
      ||||||||||||||||||||||| ||||||||||||||||||||||||| 
seq2  CTGTTTCATCTTGAAACACAGAC-TCTGGGTTATCTAATGGTCACCAATA  183

seq1  ACTGTGTTGCTTGGAATACCTGCCATCTAAGGCTAGAAAAGGCTGCCTGG  249
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  ACTGTGTTGCTTGGAATACCTGCCATCTAAGGCTAG-AAAGGCTGCCTGG  232

seq1  AGTAGTCATACTGGGGCAAGGCTTCCTGGAGTAGGCACTGAGGCTTTGTT  299
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  AGTAGTCATACT-GGGCAAGGCTTCCTGGAGTAGGCACTGAGGCTTTGTT  281

seq1  TCAGAGGTCTACTCAACTGCAAGGTTCTCCAAGTGATCAGAGTGTTCAAA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAGGTCTACTCAACTGCAAGGTTCTCCAAGTGATCAGAGTGTTCAAA  331

seq1  ACAGCTGTGCTGTTGGGATAGAAGAGGGGTTGTTTCCAGATAGAGGGCAG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCTGTGCTGTTGGGATAGAAGAGGGGTTGTTTCCAGATAGAGGGCAG  381

seq1  CTCAGATGATGGTTCTGTGCTCTTGTCTGTAATAATGAAAGGTTTGTATA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGATGATGGTTCTGTGCTCTTGTCTGTAATAATGAAAGGTTTGTATA  431

seq1  TTGCCATTCAAAGGCCCAACTAGCCTACTTCTGGTAGTTTTCAAAGGGTG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCATTCAAAGGCCCAACTAGCCTACTTCTGGTAGTTTTCAAAGGGTG  481

seq1  CTCATGCTAAAAGTCTAGAGAACTCACACAACGCTAACATTTCCAACAAC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATGCTAAAAGTCTAGAGAACTCACACAACGCTAACATTTCCAACAAC  531

seq1  ATTTAAAAGTTCTTAAGCTCTGCCCCAGTGTCCTAGGGAGTTTGATTCCT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAAAAGTTCTTAAGCTCTGCCCCAGTGTCCTAGGGAGTTTGATTCCT  581

seq1  CTCATGACTCTCTGTATGATTGCACTTATATAAATTTCAATGAAAAAGTT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATGACTCTCTGTATGATTGCACTTATATAAATTTCAATGAAAAAGTT  631

seq1  AATCAATGGACTTGAGGGATAGTTCAGTCAGTAGATTGCTCACTTCAAAA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAATGGACTTGAGGGATAGTTCAGTCAGTAGATTGCTCACTTCAAAA  681

seq1  GCATAAACACTAAAGTTGAACCCATAGAACCTATGTAAATATCCAACTGT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATAAACACTAAAGTTGAACCCATAGAACCTATGTAAATATCCAACTGT  731

seq1  GGCATGCATTTGTAATCCCTGTGCTAGGGAGAAATAAACAGAACTCCTGA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATGCATTTGTAATCCCTGTGCTAGGGAGAAATAAACAGAACTCCTGA  781

seq1  GGCTCATTGGCCAACCAGCCTTGGATAATTCTCAGATCTACATCATATTG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCATTGGCCAACCAGCCTTGGATAATTCTCAGATCTACATCATATTG  831

seq1  CGATATCATGATTCTAAACCAAGGTGGATAGTACCAGATAACCATCACCT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGATATCATGATTCTAAACCAAGGTGGATAGTACCAGATAACCATCACCT  881

seq1  GAATTGACTTCTGCCCTCCATATATGTCAACATGTATTAGTTGCCTTGTA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTGACTTCTGCCCTCCATATATGTCAACATGTATTAGTTGCCTTGTA  931

seq1  CATGTGTCAACTGGCATACACATGCACATACACCATGGTACTTTGAATAG  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTGTCAACTGGCATACACATGCACATACACCATGGTACTTTGAATAG  981

seq1  GTTTGGCCTCCATGGATTCATGTGTTTGCCCACAGGAAATGACACTATTA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGGCCTCCATGGATTCATGTGTTTGCCCACAGGAAATGACACTATTA  1031

seq1  GGAGGTGAGGCTTCGTTGGAGTAGGCGTGTCTTTATTGGAGGACTTGTGT  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGTGAGGCTTCGTTGGAGTAGGCGTGTCTTTATTGGAGGACTTGTGT  1081

seq1  TACTGTGGGAGAGGGTTTTGAGGTCTGCTTTCTTAAACTCTACCTAGTGT  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGTGGGAGAGGGTTTTGAGGTCTGCTTTCTTAAACTCTACCTAGTGT  1131

seq1  GGAATTC  1156
      |||||||
seq2  GGAATTC  1138

seq1: chr3_22551313_22551965
seq2: B6Ng01-011G23.g_67_721

seq1  GAATTCTCTAGGCTTTTTGTATGTTCATGGGCATCTCTTTCTTTAGGTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTAGGCTTTTTGTATGTTCATGGGCATCTCTTTCTTTAGGTTT  50

seq1  GGGAAGTTTTCATCTATAATTTTGTTGAAGATATTTGCTGGACCTTTAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAGTTTTCATCTATAATTTTGTTGAAGATATTTGCTGGACCTTTAAG  100

seq1  TTGAATATCTTCATTCTCATCTACTATTATCAGTAGGTTTGGCCTTCTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAATATCTTCATTCTCATCTACTATTATCAGTAGGTTTGGCCTTCTTA  150

seq1  TTTTTTTTTCTTTTTTTTATTATATATTTATATACTTTTTATTAGATATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTCTTTTTTTTATTATATATTTATATACTTTTTATTAGATATT  200

seq1  TTCTTCATTTACATTTCAAATGCTCTCCCCAAAGCCCCCTATACACCCCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCATTTACATTTCAAATGCTCTCCCCAAAGCCCCCTATACACCCCC  250

seq1  CGCCCTGGTCCCTGCTCCCCACCCACCCACTCCCGCTTCCTGGCCCTGGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCCCTGGTCCCTGCTCCCCACCCACCCACTCCCGCTTCCTGGCCCTGGC  300

seq1  TTTCCCCTGTACTGGGGCATATGATCTTTGCAATACTTTTAGATACTTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCCCTGTACTGGGGCATATGATCTTTGCAATACTTTTAGATACTTAT  350

seq1  ATACTTTTATATACTTTTAGTCCTTGCATACATATTAAGTTTTGGATCTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTTTTATATACTTTTAGTCCTTGCATACATATTAAGTTTTGGATCTA  400

seq1  TTACAAAGGAGGATATGAAGAGTTTTATTAATTATCTTTTTTGTTTGTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAAAGGAGGATATGAAGAGTTTTATTAATTATCTTTTTTGTTTGTTT  450

seq1  GTTTTTTGTTTTTTTTTTCTTCCCATTTTTTATTAGGTATTTAGCTCATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTTGTTTTTTTTTTCTTCCCATTTTTTATTAGGTATTTAGCTCATT  500

seq1  TACATTTCCAATGCTATACCAAAAGAACCCCATACCCACCCACCCCCACT  550
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  TACATTTCCAATGCTATACCAAAAGAACCTCATACCCACCCACCCCCACT  550

seq1  CCCCTACCCGCCCACTCCCCCTTTTTGGCCCTGGCGTTCTCCTGTTCTGG  600
      ||||||||||||||||  |||||  |||||||||||||||||||||||||
seq2  CCCCTACCCGCCCACTTTCCCTTAATGGCCCTGGCGTTCTCCTGTTCTGG  600

seq1  GGCATATAAAGTTTGTGTG-TCCAATGGG-CCTCTCTTTCCAGTGATGGC  648
      ||||||||||||||||||| | ||||||| |||||| ||||| |||||| 
seq2  GGCATATAAAGTTTGTGTGTTACAATGGGCCCTCTCATTCCATTGATGGT  650

seq1  CGACT  653
      |||||
seq2  CGACT  655