BAC Information

Click to search

BAC

Clone NameB6Ng01-011J21
Chromosome3 (Build37)
Map Location 79,689,115 - 79,689,344
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC383883, LOC100041748, LOC100041716, LOC100041725, LOC100041766, Rapgef2, LOC100041741, LOC100041793, LOC667613, Ppid, Etfdh, 4930579G24Rik, Rxfp1, Tmem144
Downstream gene1110032E23Rik, EG626797, Gria2, Glrb
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-011J21.bB6Ng01-011J21.g
ACCDH846951DH846952
length2301,192
definitionDH846951|Mus musculus domesticus DNA, BAC clone: B6Ng01-011J21, 5' end.DH846952|Mus musculus domesticus DNA, BAC clone: B6Ng01-011J21, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
cattcttcctggagctaagcgtggggccagctgtgtaagtaaagttttgt
ttttcttcttaaacaactttttccctctatttaaaaatgtgaagaaaaag
gcaaaaaaaacaacaacaaaaaaaaaaacaacaaaaaaaaacccaccaaa
aaacctagatattcttttctttcatttttgctctctttagtggaaagaaa
aggaataaaaagttgtgtgtgtgtgtgtgt
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaagtgacagc
agatgctggtgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
cttcatagcagccttatttataatagccagaagctggaaagaacccagat
gtccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taggatacccaagatataagatacaatttgctaaacacatgaaactcaag
aagaatgaagactgaagtgtggacactatgcccctccttagaattgggaa
caaaatacccatggaaggagttacaaagacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatatactagcaagatttaacgaaag
gacccagatgtagctgtctcttgtgagactatgctggggcctagcaaaca
cagaagtggatgctcacagtcagctaatggatggatcacagggctccaat
ggaggagctagagaatgtactcaaggagctaaagggatctgcatccttat
aggtggaacaacattatgaactacccagttcccctgagcctcctgactcc
tagctgcatatgtatcaaagaatggcctagtccgactcataccatgaagt
aaggtctatgtgacctacgaacttatatgcgccactgtgcacggtagatt
catgggccaaatgatgcgagattgctggtggcagtgagtagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_79689115_79689344
seq2: B6Ng01-011J21.b_53_282

seq1  CATTCTTCCTGGAGCTAAGCGTGGGGCCAGCTGTGTAAGTAAAGTTTTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCTTCCTGGAGCTAAGCGTGGGGCCAGCTGTGTAAGTAAAGTTTTGT  50

seq1  TTTTCTTCTTAAACAACTTTTTCCCTCTATTTAAAAATGTGAAGAAAAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTTCTTAAACAACTTTTTCCCTCTATTTAAAAATGTGAAGAAAAAG  100

seq1  GCAAAAAAAACAACAACAAAAAAAAAAACAACAAAAAAAAACCCACCAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAAAAAACAACAACAAAAAAAAAAACAACAAAAAAAAACCCACCAAA  150

seq1  AAACCTAGATATTCTTTTCTTTCATTTTTGCTCTCTTTAGTGGAAAGAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCTAGATATTCTTTTCTTTCATTTTTGCTCTCTTTAGTGGAAAGAAA  200

seq1  AGGAATAAAAAGTTGTGTGTGTGTGTGTGT  230
      ||||||||||||||||||||||||||||||
seq2  AGGAATAAAAAGTTGTGTGTGTGTGTGTGT  230