BAC Information

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BAC

Clone NameB6Ng01-012F23
Chromosome3 (Build37)
Map Location 24,975,502 - 24,976,635
singlet/doubletsinglet
Overlap genenone
Upstream geneEG635702, EG665189
Downstream geneLOC100039592, Nlgn1, LOC621017
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-012F23.bB6Ng01-012F23.g
ACCDH847485DH847486
length4021,124
definitionDH847485|Mus musculus domesticus DNA, BAC clone: B6Ng01-012F23, 5' end.DH847486|Mus musculus domesticus DNA, BAC clone: B6Ng01-012F23, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
ttgcctgtacataaaaatcagcctattttttttcctgatttgatcatcag
aaatagacagagatagtaccaaaattctacttctgggatttttgcagacc
ttcagctataaagaaacgtgtagtcataatgtttttgtgcactgcataaa
ggttatttttgtgttattcaaatgctgattcctttgtccttatatcttgt
tttaatccagacatggcattgtaatgcttacaccaaaaccttcctttctc
aagtttatctaaacaattcttactatttattctctgctttgtcaataaat
actaatcacccaatggatgggcagaagagagaatagtgtagaagtttctg
cctgccagggtgagaatagagagataggggaaggggcagagggaggggga
gg

gaattccactttactaaaacaacacagtctctaactacagactaaatgtg
tatccttacaatcacagcgaagtgtactcctctcccctcaccaccacatt
aaggaagctgcttgttgataaacatagagaccattattagaaaccacgac
caatcagaatgctgagctgtggcgtcctgtttcaatgtagctatgtacaa
atgcacatgtgcacaagggctcaaggaatactgggggacaggaagcagag
agacagtaagagccacttacatgtttgagagactccttacctcgtggctt
aaaatattcttcctaggacattcactctactataatacctggttaatgag
ttgtcattccatccttcccatgtgggtggagtccttcacaatgtatttta
ctatatattttctagagttcaaaaaataaagctctctctcactatctatc
tatctatctatctatctatctatctatctatctatcgatatagatacata
gatagatagagatatattcattatttttatttgaaaaatttcttcactta
ttttatcccaaatcatttccagtttgccttaaattatttcattggtatag
aatgcattagagagattttaaacactgcatttcatactgattttctttac
taggagccttcattataaaccaaaaacttaaaaacagacaaggaggggga
ttttaatccatgtcaactaatcagaaaccagaatatttgtcataaatagt
aaagcttcaagcaagctttcttgggctaacttcccattttctagaatttt
ttttatttgtaattttaagattacatgctaaaaatattgagagcttgcta
tgggcaagatactacccagagtagttggtggaaaatcaatgtgcattaaa
ccatgtaactgcaagctaagaccttgcattctacaaaatacattttatat
atttgggatgtgaaatcagtatggtgttctccttcctatgtgtcataagc
tggggggggggggtcacagattcccttgacatctaaatcttttcatattg
tttctcagtaatctcggagtctctaatgtgactttagggatgtcccctcc
taacctaagcctactggaaattct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_24975502_24976635
seq2: B6Ng01-012F23.g_64_1187

seq1  GAATTCCACTTTACTAAAACAACACAGTCTCTAACTACAGACTAAATGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACTTTACTAAAACAACACAGTCTCTAACTACAGACTAAATGTG  50

seq1  TATCCTTACAATCACAGCGAAGTGTACTCCTCTCCCCTCACCACCACATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCTTACAATCACAGCGAAGTGTACTCCTCTCCCCTCACCACCACATT  100

seq1  AAGGAAGCTGCTTGTTGATAAACATAGAGACCATTATTAGAAACCACGAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAAGCTGCTTGTTGATAAACATAGAGACCATTATTAGAAACCACGAC  150

seq1  CAATCAGAATGCTGAGCTGTGGCGTCCTGTTTCAATGTAGCTATGTACAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCAGAATGCTGAGCTGTGGCGTCCTGTTTCAATGTAGCTATGTACAA  200

seq1  ATGCACATGTGCACAAGGGCTCAAGGAATACTGGGGGACAGGAAGCAGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCACATGTGCACAAGGGCTCAAGGAATACTGGGGGACAGGAAGCAGAG  250

seq1  AGACAGTAAGAGCCACTTACATGTTTGAGAGACTCCTTACCTCGTGGCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAGTAAGAGCCACTTACATGTTTGAGAGACTCCTTACCTCGTGGCTT  300

seq1  AAAATATTCTTCCTAGGACATTCACTCTACTATAATACCTGGTTAATGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATATTCTTCCTAGGACATTCACTCTACTATAATACCTGGTTAATGAG  350

seq1  TTGTCATTCCATCCTTCCCATGTGGGTGGAGTCCTTCACAATGTATTTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCATTCCATCCTTCCCATGTGGGTGGAGTCCTTCACAATGTATTTTA  400

seq1  CTATATATTTTCTAGAGTTCAAAAAATAAAGCTCTCTCTCACTATCTATC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATATATTTTCTAGAGTTCAAAAAATAAAGCTCTCTCTCACTATCTATC  450

seq1  TATCTATCTATCTATCTATCTATCTATCTATCTATCGATATAGATACATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTATCTATCTATCTATCTATCTATCTATCTATCGATATAGATACATA  500

seq1  GATAGATAGAGATATATTCATTATTTTTATTTGAAAAATTTCTTCACTTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGATAGAGATATATTCATTATTTTTATTTGAAAAATTTCTTCACTTA  550

seq1  TTTTATCCCAAATCATTTCCAGTTTGCCTTAAATTATTTCATTGGTATAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATCCCAAATCATTTCCAGTTTGCCTTAAATTATTTCATTGGTATAG  600

seq1  AATGCATTAGAGAGATTTTAAACACTGCATTTCATACTGATTTTCTTTAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCATTAGAGAGATTTTAAACACTGCATTTCATACTGATTTTCTTTAC  650

seq1  TAGGAGCCTTCATTATAAACCAAAAACTTAAAAACAGACAAGGAGGGGGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGAGCCTTCATTATAAACCAAAAACTTAAAAACAGACAAGGAGGGGGA  700

seq1  TTTTAATCCATGTCAACTAATCAGAAACCAGAATATTTGTCATAAATAGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAATCCATGTCAACTAATCAGAAACCAGAATATTTGTCATAAATAGT  750

seq1  AAAGCTTCAAGCAAGCTTTCTTGGGCTAACTTCCCATTTTCTAGAATTTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCTTCAAGCAAGCTTTCTTGGGCTAACTTCCCATTTTCTAGAATTTT  800

seq1  TTTTATTTGTAATTTTAAGATTACATGCTAAAAATATTGAGAGCTTGCTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATTTGTAATTTTAAGATTACATGCTAAAAATATTGAGAGCTTGCTA  850

seq1  TGGGCAAGATACTACCCAGAGTAGTTGGTGGAAAATCAATGTGCATTAAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCAAGATACTACCCAGAGTAGTTGGTGGAAAATCAATGTGCATTAAA  900

seq1  CCATGTAACTGCAAGCTAAGACCTTGCATTCTACAAAATACATTTTATAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGTAACTGCAAGCTAAGACCTTGCATTCTACAAAATACATTTTATAT  950

seq1  ATTT-GGATGTGAAATCAGTATGGTGTTTCTCCTTCCTATTGTGTTCATA  999
      |||| ||||||||||||||||||||| |||||||||||| |||| |||| 
seq2  ATTTGGGATGTGAAATCAGTATGGTG-TTCTCCTTCCTA-TGTG-TCAT-  996

seq1  AAGCT-GGGGGGGGGGGTCACCAGATTCCCCTGACATCTTAGATCTTTCA  1048
      ||||| |||||||||||||| ||||||||| ||||||| || ||||||  
seq2  AAGCTGGGGGGGGGGGGTCA-CAGATTCCCTTGACATC-TAAATCTTTTC  1044

seq1  TTTTTGTTTTCTCAATTATATCTGAGTTCCTAAATGTGACTTTAGGATAT  1098
       | ||| ||||||| | || || ||||  || ||||||||||||||  ||
seq2  ATATTG-TTTCTCAGTAATCTCGGAGTCTCT-AATGTGACTTTAGG-GAT  1091

seq1  GTCCCTCTCCTTAAATCTTAGGCTACTGGAATTTCT  1134
      ||||| |||||  || || || ||||||||| ||||
seq2  GTCCC-CTCCT--AACCTAAGCCTACTGGAAATTCT  1124


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