BAC Information

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BAC

Clone NameB6Ng01-012P11
Chromosome3 (Build37)
Map Location 29,315,327 - 29,316,445
singlet/doubletsinglet
Overlap gene6130401L20Rik
Upstream geneTnik, Slc2a2, EG624446, Eif5a2, Rpl22l1, Gm1527
Downstream geneLOC100040676, Evi1, Mds1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-012P11.bB6Ng01-012P11.g
ACCDH847907DH847908
length1,1521,113
definitionDH847907|Mus musculus domesticus DNA, BAC clone: B6Ng01-012P11, 5' end.DH847908|Mus musculus domesticus DNA, BAC clone: B6Ng01-012P11, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaactgaggaatacaatatggctgagaagcacctgaaaaaaat
gttcaaaatccttaatcatcagggaaatgcaaatcaaaacaaccctgaaa
ttccatgtcacactattcaaaatggctaagatcaaaaattcaggtgacag
cagatgctggtgaggatgtggagaaggaagaacactcctccattgttggt
gaggttgcaagctggtacaaccactctggaaatcagtctggtggttcctc
aaaaaattggatatagtactaccacaagacccagcaatacctctcctggg
catatacccagaagatgccccaagttgtaataaggacacgttctccactg
tgtttatagcaacacatttatgatagctagaaactgggaagaacccagat
gtccctcaacagaggaatggatgcagaaaatgtggtacatttacacaatg
gtgtactactcagctattaaaaacaatgaatttatgaaattcttaggcaa
atggatggatctggaatatatcatcctgagtgaggtaacacaatcacaaa
ataacgcacatgatatgtactcattaataagcagatattagcccagaaac
ttaggatacccaagatataatttgcaaaacacatgaaacccaagaagaag
gaagaccaggaagtggatactttgttccttcttagaatggggaacaaaaa
tacctatggaaggagttacaaagttcggagctaagatggaaggaaggacc
atccagagactgctccaccggagtatccatcccatatacaaccaccaaat
ccagatactattgcatatgccagcaagatttttctgacaggaccctggta
taagtatctcttgtgaggctatgccagtgtctggcaaatacagaagtgga
tgctcacagtcatctattggatggaacacagggcctctgatgatgatgtt
agagatgatctcaaaggagctaaaggggtctgcaccctataggagatcaa
taatatgagcaatccactatccctcagactatgcatctagttgcatatgt
agcagagatgcctgttgccatcaatggagaagagcctggctgtgagattc
atatgcccagtacagctaattcaggccagcatgtgatggggtgttgaaaa
gc
gaattcagtagacttacatattgataacatagtttcgattgcatattttt
ttacctttttcctttattagtttttatggaagtgcaagcttttaaaataa
gatttgacgttcgagaaacttgtatgtttaaatctagaatgttggtatag
actgaattggatgagaccatgcacaatttttcagaggatagaaaaaaaca
ggcagtgaagaaatatatactaaataaatttagaaagaactattaaatgt
ttacccattactacaaactaatttggaaacagtgcagataacccgaattg
caccagagccatttcatttaaccagcttacatataaaatactattttggg
gtgagtttactgggtcttttcttgctttagtcttctatcttctgctgatt
ctatctatattcccagatgtgctcttgtggcccatgaaatcaagcttggg
tgagacctggtgcagaacaggaaggcgacccatacttggtttcagtggct
gcaagaatgactgcatggtcgacaggatgcctttgatgttgcacaggcct
tccaggaaagaagccattgaaaaccttcaaccagtgttactacactcaga
tacacaaaagaaatgaacacagtccatgctccaacatgatcatttatttc
tctaaccagattggaaccagtagcagtgaatgacactgttcatgatattt
gaaaagcagtgttcagggcctagagctatggcttgggaaactgcttgcaa
aagagcataaggatcctagttcgaatcctcagcacatgggtataagctta
gcatagcagtacacacctataatcccaaaccagggtctcagagaccagca
gacaccggggggcttactagccagccagcccagcctaactgacaggccag
taagagatttgtttcaagaaacaagatgggcagctccttaataaggatga
tggatgttgacctcagcctctacacatatccttcactacccaatactgtt
tgtacacagaagcttcttcatctcggaagaagttgagttggtcccccacg
tgcatttctgaccttcctgttcagctgttcctcttctccactttgctgtg
gctgcatctgtca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_29315327_29316445
seq2: B6Ng01-012P11.g_70_1182

seq1  GAATTCAGTAGACTTACATATTGATAACATAGTTTCGATTGCATATTTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTAGACTTACATATTGATAACATAGTTTCGATTGCATATTTTT  50

seq1  TTACCTTTTTCCTTTATTAGTTTTTATGGAAGTGCAAGCTTTTAAAATAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCTTTTTCCTTTATTAGTTTTTATGGAAGTGCAAGCTTTTAAAATAA  100

seq1  GATTTGACGTTCGAGAAACTTGTATGTTTAAATCTAGAATGTTGGTATAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTGACGTTCGAGAAACTTGTATGTTTAAATCTAGAATGTTGGTATAG  150

seq1  ACTGAATTGGATGAGACCATGCACAATTTTTCAGAGGATAGAAAAAAACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAATTGGATGAGACCATGCACAATTTTTCAGAGGATAGAAAAAAACA  200

seq1  GGCAGTGAAGAAATATATACTAAATAAATTTAGAAAGAACTATTAAATGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGTGAAGAAATATATACTAAATAAATTTAGAAAGAACTATTAAATGT  250

seq1  TTACCCATTACTACAAACTAATTTGGAAACAGTGCAGATAACCCGAATTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCCATTACTACAAACTAATTTGGAAACAGTGCAGATAACCCGAATTG  300

seq1  CACCAGAGCCATTTCATTTAACCAGCTTACATATAAAATACTATTTTGGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCAGAGCCATTTCATTTAACCAGCTTACATATAAAATACTATTTTGGG  350

seq1  GTGAGTTTACTGGGTCTTTTCTTGCTTTAGTCTTCTATCTTCTGCTGATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGTTTACTGGGTCTTTTCTTGCTTTAGTCTTCTATCTTCTGCTGATT  400

seq1  CTATCTATATTCCCAGATGTGCTCTTGTGGCCCATGAAATCAAGCTTGGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCTATATTCCCAGATGTGCTCTTGTGGCCCATGAAATCAAGCTTGGG  450

seq1  TGAGACCTGGTGCAGAACAGGAAGGCGACCCATACTTGGTTTCAGTGGCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGACCTGGTGCAGAACAGGAAGGCGACCCATACTTGGTTTCAGTGGCT  500

seq1  GCAAGAATGACTGCATGGTCGACAGGATGCCTTTGATGTTGCACAGGCCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGAATGACTGCATGGTCGACAGGATGCCTTTGATGTTGCACAGGCCT  550

seq1  TCCAGGAAAGAAGCCATTGAAAACCTTCAACCAGTGTTACTACACTCAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGGAAAGAAGCCATTGAAAACCTTCAACCAGTGTTACTACACTCAGA  600

seq1  TACACAAAAGAAATGAACACAGTCCATGCTCCAACATGATCATTTATTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACAAAAGAAATGAACACAGTCCATGCTCCAACATGATCATTTATTTC  650

seq1  TCTAACCAGATTGGAACCAGTAGCAGTGAATGACACTGTTCATGATATTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAACCAGATTGGAACCAGTAGCAGTGAATGACACTGTTCATGATATTT  700

seq1  GAAAAGCAGTGTTCAGGGCCTAGAGCTATGGCTTGGGAAACTGCTTGCAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGCAGTGTTCAGGGCCTAGAGCTATGGCTTGGGAAACTGCTTGCAA  750

seq1  AAGAGCATAAGGATCCTAGTTCGAATCCTCAGCACATGGGTATAAGCTTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGCATAAGGATCCTAGTTCGAATCCTCAGCACATGGGTATAAGCTTA  800

seq1  GCATAGCAGTACACACCTATAATCCCAAACCAGGGTCTCAGAGACCAGCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATAGCAGTACACACCTATAATCCCAAACCAGGGTCTCAGAGACCAGCA  850

seq1  GACACC-GGGGGCTTACTAGCCAGCCAGCCCAGCCTAACTGACAGGCCAG  899
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  GACACCGGGGGGCTTACTAGCCAGCCAGCCCAGCCTAACTGACAGGCCAG  900

seq1  TAAGAGATTTGTTTCAAGAAACAAGATGGGCAGCTCCTTAATAAGGATGA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAGATTTGTTTCAAGAAACAAGATGGGCAGCTCCTTAATAAGGATGA  950

seq1  TGGATGTTGACCTCAGGCCTCTACACATATCCTTCACCTACCCAATACTG  999
      ||||||||||||||| |||||||||||||||||||| |||||||||||||
seq2  TGGATGTTGACCTCA-GCCTCTACACATATCCTTCA-CTACCCAATACTG  998

seq1  TTTGTAACACAGGAGCTTCTTCATCTCGGAAG-AGTTGAGTTGTGTCCCC  1048
      ||||| |||||| ||||||||||||||||||| |||||||||| ||||||
seq2  TTTGT-ACACAGAAGCTTCTTCATCTCGGAAGAAGTTGAGTTG-GTCCCC  1046

seq1  CACGTGCA-TTCTGACCTTCCTGTTCAGCCTGTCCCTCTTCCTCCACTTC  1097
      |||||||| ||||||||||||||||||| |||| |||||| |||||||| 
seq2  CACGTGCATTTCTGACCTTCCTGTTCAG-CTGTTCCTCTT-CTCCACTT-  1093

seq1  TGCTGTGGCTGTCACTCTGTCA  1119
      ||||||||||| || |||||||
seq2  TGCTGTGGCTG-CA-TCTGTCA  1113