BAC Information

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BAC

Clone NameB6Ng01-012P18
Chromosome3 (Build37)
Map Location 111,593,554 - 111,594,603
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043190, LOC668712
Downstream geneLOC625585, EG229746, LOC668717
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-012P18.bB6Ng01-012P18.g
ACCDH847921DH847922
length1,2371,052
definitionDH847921|Mus musculus domesticus DNA, BAC clone: B6Ng01-012P18, 5' end.DH847922|Mus musculus domesticus DNA, BAC clone: B6Ng01-012P18, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccaaatggctgagaagtacctgaaaaaata
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccttgagat
tccacctcacaccagtcagaatggctaagatcaaaaactcaggtgacagc
agatgctggtgaggatgtggtgaaagaggaacattcttcctcctttgatg
ttgggattgcaagctggtaatcactctggaaatcattttggcagttcctc
ataaaactggacataggtcttcctgaggacccagcaataccactcctgca
catatacttagattatccatcatgtaataaggacacatgctccactatgt
tcatagcagccttataatagcagaagctggtaaaagaacccaggtatccc
tcaacagaggaatggatacagaaaatgtattacatttacacaatggatta
ctactcagcttttaaaacaataaatttatgaaatttgtaggcaaatggat
ggttctggaggatatcatcctgagtgaggtaacccaatcacacacacaca
cacacacacacacacacacacacacaaaatgatatgtactcactgataag
tagatattagcccagaagctcagaatacccaagaggcaattcacaaccac
atgaaactcaagaagaaggaagaccaaaatgtgcataatttgatccttat
tagaagggggaacaaaatacccatggaatgagttacagatacaaaagggt
cgaacagagactgaagaaatgaccatcaagagactgccccacctaggaat
ccataccacacataatcatcaaaaccagacactttttgtggatgccaaaa
aatcttgctgacagtagcctgttatagctgtttcctgagggctccatcag
tgcctgacaaatacagaagtggatgcttacagcatatcatttcgacggag
cacacggttctcaacgaaggagctagaagaaaggacctaggatctgaagg
ggtttgcagctccatagatgaccaatcaatatgaacttatccagactctc
tttgggacttataaagcaccatcaaagagagcccattggtgagaaatcat
gctctcacttgcatattagcagagaaatgcttattcagtcatacatggga
gagctcttgttctatgaagcgtatgctcaggtaggggatgccgaatcgga
aatcgggaattggcgatgtatgtcgtcacagtaccgt
gaattcattactaatatcactaagtttgaaaatacacataaagtataggt
atagacagttatattctgtccttgaagaatagcctgtatagcatcagatg
tattaatatttcatggggatatttaaatattatgttatcatatttgtcta
ggcagtatgtaaaaggcaaatcaatttggctataatagtaaagaaagatt
tctgtattttttttgcttgcttcagggatacagaataatgataaaatatg
ttcattttaaatatatccctttaacttctaaagcccatggtaaaaaaaat
atatccaaaaataaatgtctgagcacattttggctatgtggcatacaaaa
gtagagagaagattatatagaaaatatctcttttgttatcgctcatctat
tccaaaataacatagaggattctagctaatgttccatatatgcacaattt
actgtaatataggctatcaaccactttcttcttattacatgctgccacca
gcacacagatataccttccgttatcctgtgctttagtcccataactaggg
ttatacactgtatgactctatttcatgctgttgggttgtgcatatctgtt
tgtttttgtgtaagttaagaggtatattaggaaaaattaacatattttca
tcccataactgatatttactaacaaccaaataaaaaagactattggctat
tgtaggaattatgctgattttagggtttaactaagtacttgacaaattat
ctgtttaatgccctttacttctgttgtccttcacaatcctaacacctgct
cttctcttttcctaacctatctgtatctcattttatagcttctccttcca
aatccataaactcacaatatcctttttggtattgagtcaccaatactttg
actctagattgctacacaatgaaggcttattattaattatcttcaaacct
ggtcaaactctgcttaatagttttttcatattttaactcattcagattta
gggatctatatgaatgtgtaaatggttttgttgcgtttgcagagggaatt
ga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_111593554_111594603
seq2: B6Ng01-012P18.g_66_1117 (reverse)

seq1  TCAATTTCCCTCTGCAAACGCAACAAAACCAATGTCCACA-TCATATAGG  49
      |||| ||||||||||||||||||||||||| || | |||| |||||||| 
seq2  TCAA-TTCCCTCTGCAAACGCAACAAAACC-ATTTACACATTCATATAGA  48

seq1  TCCCTTAAATCTGAATGAGTTAAAATATG-AAAAACTATTAAGCAGAGTT  98
      |||| |||||||||||||||||||||||| ||||||||||||||||||||
seq2  TCCC-TAAATCTGAATGAGTTAAAATATGAAAAAACTATTAAGCAGAGTT  97

seq1  TGA-CAGGTTTGAAGATAATTAATAAATAAGCCTTCATTGTGTAGCAATC  147
      ||| |||||||||||||||||||| |||||||||||||||||||||||||
seq2  TGACCAGGTTTGAAGATAATTAAT-AATAAGCCTTCATTGTGTAGCAATC  146

seq1  TAGAGTC-AAGTATTGGTGACTCAATACCAAAAA-GATATTGTGAGTTTA  195
      ||||||| |||||||||||||||||||||||||| |||||||||||||||
seq2  TAGAGTCAAAGTATTGGTGACTCAATACCAAAAAGGATATTGTGAGTTTA  196

seq1  TGGATTTGGAAGGAGAAGCTAT-AAATGAGATACAGATAGGTTAGGAAAA  244
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  TGGATTTGGAAGGAGAAGCTATAAAATGAGATACAGATAGGTTAGGAAAA  246

seq1  GAGAAGAGCAGGTGTTAGGATTGTGAAGGACAACAGAAGTAAAGGGCATT  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAGAGCAGGTGTTAGGATTGTGAAGGACAACAGAAGTAAAGGGCATT  296

seq1  AAACAGATAATTTGTCAAGTACTTAGTTAAACCCTAAAATCAGCATAATT  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAGATAATTTGTCAAGTACTTAGTTAAACCCTAAAATCAGCATAATT  346

seq1  CCTACAATAGCCAATAGTCTTTTTTATTTGGTTGTTAGTAAATATCAGTT  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACAATAGCCAATAGTCTTTTTTATTTGGTTGTTAGTAAATATCAGTT  396

seq1  ATGGGATGAAAATATGTTAATTTTTCCTAATATACCTCTTAACTTACACA  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGATGAAAATATGTTAATTTTTCCTAATATACCTCTTAACTTACACA  446

seq1  AAAACAAACAGATATGCACAACCCAACAGCATGAAATAGAGTCATACAGT  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAAACAGATATGCACAACCCAACAGCATGAAATAGAGTCATACAGT  496

seq1  GTATAACCCTAGTTATGGGACTAAAGCACAGGATAACGGAAGGTATATCT  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATAACCCTAGTTATGGGACTAAAGCACAGGATAACGGAAGGTATATCT  546

seq1  GTGTGCTGGTGGCAGCATGTAATAAGAAGAAAGTGGTTGATAGCCTATAT  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGCTGGTGGCAGCATGTAATAAGAAGAAAGTGGTTGATAGCCTATAT  596

seq1  TACAGTAAATTGTGCATATATGGAACATTAGCTAGAATCCTCTATGTTAT  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGTAAATTGTGCATATATGGAACATTAGCTAGAATCCTCTATGTTAT  646

seq1  TTTGGAATAGATGAGCGATAACAAAAGAGATATTTTCTATATAATCTTCT  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGAATAGATGAGCGATAACAAAAGAGATATTTTCTATATAATCTTCT  696

seq1  CTCTACTTTTGTATGCCACATAGCCAAAATGTGCTCAGACATTTATTTTT  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTACTTTTGTATGCCACATAGCCAAAATGTGCTCAGACATTTATTTTT  746

seq1  GGATATATTTTTTTTACCATGGGCTTTAGAAGTTAAAGGGATATATTTAA  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATATATTTTTTTTACCATGGGCTTTAGAAGTTAAAGGGATATATTTAA  796

seq1  AATGAACATATTTTATCATTATTCTGTATCCCTGAAGCAAGCAAAAAAAA  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAACATATTTTATCATTATTCTGTATCCCTGAAGCAAGCAAAAAAAA  846

seq1  TACAGAAATCTTTCTTTACTATTATAGCCAAATTGATTTGCCTTTTACAT  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGAAATCTTTCTTTACTATTATAGCCAAATTGATTTGCCTTTTACAT  896

seq1  ACTGCCTAGACAAATATGATAACATAATATTTAAATATCCCCATGAAATA  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCCTAGACAAATATGATAACATAATATTTAAATATCCCCATGAAATA  946

seq1  TTAATACATCTGATGCTATACAGGCTATTCTTCAAGGACAGAATATAACT  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATACATCTGATGCTATACAGGCTATTCTTCAAGGACAGAATATAACT  996

seq1  GTCTATACCTATACTTTATGTGTATTTTCAAACTTAGTGATATTAGTAAT  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTATACCTATACTTTATGTGTATTTTCAAACTTAGTGATATTAGTAAT  1046

seq1  GAATTC  1050
      ||||||
seq2  GAATTC  1052