BAC Information

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BAC

Clone NameB6Ng01-013B04
Chromosome3 (Build37)
Map Location 25,691,412 - 25,692,065
singlet/doubletsinglet
Overlap geneNlgn1
Upstream geneLOC100039592, LOC621017
Downstream geneLOC229152, Spata16
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-013B04.g
ACCDH847986
length653
definitionDH847986|Mus musculus domesticus DNA, BAC clone: B6Ng01-013B04, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctaacatgatcaaagaaagaaagaaagaggagggttttattttt
gttttgttttgttttgtttttgtttctgtttttaagtgatttcctgaatg
caatgcaaatatagagaagcaggtctacaatcatagttataggccctaaa
gataaattgataaacagaacaaaatgtctcacctccatggagtcataaac
ccataaagtgaagtcaacaaaaaaactaacataattacacggaaattaaa
gtaggttacaggaagaaatggataatacatgaagaataatgaagtaaaag
tgtgaaatatggaagattcaagggcacaggatggagggagggcatgagtt
caatattttcatgatagattgcccaaggaaatctcaataagaaagcacca
ttgaagatggaccttaaaatcagtgaggacactcagctattggatggaag
acagggcccccagtagaggagctagagaaggtacccaaggagctgaaggg
gtatgcaaccctataggtgaaacagcaatatgaactaaccagtaccccca
gagcttgtgtatctagctgcatatgcagcagaagatggcctagtcggcca
tcattgggaagagaggcccctaggtcttgcaaactttatatgccctagta
cag
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_25691412_25692065
seq2: B6Ng01-013B04.g_69_721 (reverse)

seq1  CTGTACTAGGGCATATAAAGTTTGCAAGACCTAGGGGCCTCTCTTCCCAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTACTAGGGCATATAAAGTTTGCAAGACCTAGGGGCCTCTCTTCCCAA  50

seq1  TGATGGCCGACTAGGCCATCTTCTGCTGCATATGCAGCTAGATACACAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGGCCGACTAGGCCATCTTCTGCTGCATATGCAGCTAGATACACAAG  100

seq1  CTCTGGGGGTACTGGTTAGTTCATATTGCTGTTTCACCTATAGGGTTGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGGGGGTACTGGTTAGTTCATATTGCTGTTTCACCTATAGGGTTGCA  150

seq1  TACCCCTTCAGCTCCTTGGGTACCTTCTCTAGCTCCTCTACTGGGGGCCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCCCTTCAGCTCCTTGGGTACCTTCTCTAGCTCCTCTACTGGGGGCCC  200

seq1  TGTCTTCCATCCAATAGCTGAGTGTCCTCACTGATTTTAAGGTCCATCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTTCCATCCAATAGCTGAGTGTCCTCACTGATTTTAAGGTCCATCTT  250

seq1  CAATGGTGCTTTCTTATTGAGATTTCCTTGGGCAATCTATCATGAAAATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGGTGCTTTCTTATTGAGATTTCCTTGGGCAATCTATCATGAAAATA  300

seq1  TTGAACTCATGCCCTCCCTCCATCCTGTGCCCTTGAATCTTCCATATTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAACTCATGCCCTCCCTCCATCCTGTGCCCTTGAATCTTCCATATTTC  350

seq1  ACACTTTTACTTCATTATTCTTCATGTATTATCCATTTCTTCCTGTAACC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTTTTACTTCATTATTCTTCATGTATTATCCATTTCTTCCTGTAACC  400

seq1  TACTTTAATTTCCGTGTAATTATGTTAGTTTTTTTGTTGACTTCACTTTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTTAATTTCCGTGTAATTATGTTAGTTTTTTTGTTGACTTCACTTTA  450

seq1  TGGGTTTATGACTCCATGGAGGTGAGACATTTTGTTCTGTTTATCAATTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTTTATGACTCCATGGAGGTGAGACATTTTGTTCTGTTTATCAATTT  500

seq1  ATCTTTAGGGCCTATAACTATGATTGTAGACCTGCTTCTCTATATTTGCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTTAGGGCCTATAACTATGATTGTAGACCTGCTTCTCTATATTTGCA  550

seq1  TTGCATTCAGGAAATCACTTAAAAACAGAAACAAAAACAAAACAAAACAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCATTCAGGAAATCACTTAAAAACAGAAACAAAAACAAAACAAAACAA  600

seq1  AACAAAAATAAAACCCTCCTCTTTCTTTCTTTCTTTGATCATGTTAAGGA  650
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  AACAAAAATAAAACCCTCCTCTTTCTTTCTTTCTTTGATCATGTT-AGGA  649

seq1  ATTC  654
      ||||
seq2  ATTC  653