BAC Information

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BAC

Clone NameB6Ng01-013E15
Chromosome10 (Build37)3 (Build37)
Map Location 32,083,047 - 32,083,139121,279,779 - 121,279,818
singlet/doubletsingletsinglet
Overlap geneTcba1
Upstream geneTpd52l1, LOC100041294, Ibrdc1, LOC666055, LOC667752, LOC100040638
Downstream geneEG667761, Trdn
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-013E15.bB6Ng01-013E15.g
ACCDH848147DH848148
length445556
definitionDH848147|Mus musculus domesticus DNA, BAC clone: B6Ng01-013E15, 5' end.DH848148|Mus musculus domesticus DNA, BAC clone: B6Ng01-013E15, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(32,083,047 - 32,083,139)(121,279,779 - 121,279,818)
sequence
tatcagaccttcaaagaagatataatattaatactcttcaaactattcca
caaaatagaaacagaaggaacaggacccaatcaattttatgaagccacag
ttaaactgagtcttctcccttggagatggaacagtttctgcctaactagg
aacttgtcacaatttcctttcatagaacacttcataagaaaaattttcta
cttctatcataattttttacaaactttttgagtgcatattatttttagct
tcagaagatatgtatatttaaccggcatttgacaatttaaaaagatgtca
ttactgaattgtatatttaaaataaattttattagttcaaaaaaaaggaa
aaatgaaagaaaaaaggaaagaaaagaaaaggaaaggaagggaaggggaa
ggggaaaaggaagaagaaagggaaagggaaagggaaagggaaagg
tttgtatagattggatattagccctctattgtatgtaggattggtaaaga
ttttttccctatctgttggttgctgttttgtcctattgacagggtccttt
gccttacagaagctttgcaatgaagttgtttatcagccttagcatatctc
tagtggaatttttggggtaacttaaatatatgaccatgtatgtcatgtac
acatagtgatattttgacttcttccttttccaatttgtatccctttaaca
tagttttgttgtctaattgctttagctagaatttgagtactatattgaat
agatagggaaagagtgggcagccttgtctattccctgattttaatgggat
tgcttcaagtttctctccacttagtttgatgttgactaatgttttttctg
tatattgcttttattatatttaggtataggccttgaattcctgatctttc
caaaactttcaacatgaatggatgctgaattttgtgaaatgctttttcag
tatctaatgaaatattcatgggttttttttgttgttgttattggtttttc
tttttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_32083047_32083139
seq2: B6Ng01-013E15.b_332_496 (reverse)

seq1  CCTTTTCCTTTTCCTTTCCCTTTCCCTTTCTTCT--CTTGAACCAT----  44
      ||||| ||||| ||||||||||||||||||||||  |||   || |    
seq2  CCTTTCCCTTTCCCTTTCCCTTTCCCTTTCTTCTTCCTTTTCCCCTTCCC  50

seq1  -----------------------------CTTTAT------GTTTTTACT  59
                                   |||| |       ||||| ||
seq2  CTTCCCTTCCTTTCCTTTTCTTTTCTTTCCTTTTTTCTTTCATTTTTCCT  100

seq1  TGTT------CTAACA-------------------AATCCAGTTAT----  80
      | ||      |||| |                   ||| |||| ||    
seq2  TTTTTTTGAACTAATAAAATTTATTTTAAATATACAATTCAGTAATGACA  150

seq1  --TTTTTAAATTGTC  93
        |||||||||||||
seq2  TCTTTTTAAATTGTC  165

seq1: chr3_121279779_121279818
seq2: B6Ng01-013E15.g_590_627 (reverse)

seq1  AAAAAAAAAAAACCCAAACAACAACAACAAAAAAAACCCA  40
      |||||| |||||||  || |||||||||||||||||||||
seq2  AAAAAAGAAAAACC--AATAACAACAACAAAAAAAACCCA  38