BAC Information

Click to search

BAC

Clone NameB6Ng01-014M01
Chromosome3 (Build37)
Map Location 35,705,922 - 35,706,607
singlet/doubletsinglet
Overlap geneAtp11b
Upstream geneLOC665655, Ube2l3-ps1, LOC625963
Downstream geneLOC665667, Dcun1d1, Mccc1, BC050811, Acad9, D3Ertd254e, Gpr103, Anxa5, 1810062G17Rik, LOC665709, Exosc9, Ccna2, Bbs7, Trpc3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-014M01.bB6Ng01-014M01.g
ACCDH849207DH849208
length6881,081
definitionDH849207|Mus musculus domesticus DNA, BAC clone: B6Ng01-014M01, 5' end.DH849208|Mus musculus domesticus DNA, BAC clone: B6Ng01-014M01, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccatgtaaaagttgtgttccaatagaaaatatcacaaaggttcta
ccagagcaccttttccttcccttcagctacttattgtctttattcacttt
atatcctgaccatttccactttaggtcttaacttctttctaccataattt
ataaatatatttatgtgtgctattgtatcatgaactaaaattttagacat
ttttagttacagaatataaaggcaaaactttggagctaaagagatgactc
agaaatcaagagcacattctgttctttcaggggactcagttccgagcgtt
tgcattggatatgaattcaaattcaaatctgcctcaactccagcttcagg
aatttaaagcctttggtttccacaagaacctgtagtcatgtgtactaccc
acatatagacacatgtgtgcacacaatttttgtttgtttgtttgtttgtt
tgagacagggtttctctgtatagtcctgggtgtcctggaactcactctgt
agaccaggctggcctcgaactcagaaatctgcctgcctctgcctcccgag
tgctgggattaaaggcgtgcgcccccactgcctttttttaaagtaaattt
tttaaaaggacagctattacctttaccatttcatatacatacccaaaact
tgtccactttttcctacactggtgtgctctaacttgac
gaattctttgtttagctctgtaccccatttttaatagggttatttgattc
tcaggagtctaacttcttgagttctttgtaaatattagatattagccctc
tatcaaatgtagggttgataaagatcttttcccaatctgttggttgccgt
tttgttctgttgacagtgtcctttgccttacagaatttttgcaattttat
gaggttccattggtcaattcttgatcttagagcataagctattggtgttc
tgttcaggaaattttcccctgtgcccatgtcctcggggcttttccccact
tccttttctattagtttcagtgtatctggttttatgtggagtccttgaca
cgcttggacttgagctttgtacaaggagataaaaatgggttgatttgctc
tcttttacaagtggtggttaccacttgtaccagcaccatttgttgaaaac
gttgtctttttttccactggatggttttagctcctttgtcaaagatcaag
ggactataggtgtgtgggcttatttctgggtcttctattccattgatcta
cctgcctgtctctatagcaataacatgcagttattttttattattattac
aattgctttgtagtacagcttgaggtcagggatggtgattcccccagaag
ttcttttattgttgagaatagttttcactatcctgggtttttggttattc
cagatgaaattacaaattgccctttctaactcaatgaagaattgagttgg
aattttgatgaggattgcattgaatctgtagattgcttttggcaagttgg
ccatttttactatattaatcctgccgatctatgagcatgggagatttttc
catcttctgagatcttctccatttctttctcagagactttgaagttcttg
ttatacaagatccttactaagtaggagtcataccaaggtattttatatta
tttgtgacatgttacggtgttgttcctaattctttctcagctgtttatgc
ttgaaagagatgcactaattgtttgagtatttaatatcagctactttgct
gaagttgttatacacggttaggagatatctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_35705922_35706607
seq2: B6Ng01-014M01.b_34_721

seq1  GAATTCCATGTAAAAGTTGTGTTCCAATAGAAAATATCACAAAGGTTCTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATGTAAAAGTTGTGTTCCAATAGAAAATATCACAAAGGTTCTA  50

seq1  CCAGAGCACCTTTTCCTTCCCTTCAGCTACTTATTGTCTTTATTCACTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAGCACCTTTTCCTTCCCTTCAGCTACTTATTGTCTTTATTCACTTT  100

seq1  ATATCCTGACCATTTCCACTTTAGGTCTTAACTTCTTTCTACCATAATTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCCTGACCATTTCCACTTTAGGTCTTAACTTCTTTCTACCATAATTT  150

seq1  ATAAATATATTTATGTGTGCTATTGTATCATGAACTAAAATTTTAGACAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATATATTTATGTGTGCTATTGTATCATGAACTAAAATTTTAGACAT  200

seq1  TTTTAGTTACAGAATATAAAGGCAAAACTTTGGAGCTAAAGAGATGACTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAGTTACAGAATATAAAGGCAAAACTTTGGAGCTAAAGAGATGACTC  250

seq1  AGAAATCAAGAGCACATTCTGTTCTTTCAGGGGACTCAGTTCCGAGCGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATCAAGAGCACATTCTGTTCTTTCAGGGGACTCAGTTCCGAGCGTT  300

seq1  TGCATTGGATATGAATTCAAATTCAAATCTGCCTCAACTCCAGCTTCAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATTGGATATGAATTCAAATTCAAATCTGCCTCAACTCCAGCTTCAGG  350

seq1  AATTTAAAGCCTTTGGTTTCCACAAGAACCTGTAGTCATGTGTACTACCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTAAAGCCTTTGGTTTCCACAAGAACCTGTAGTCATGTGTACTACCC  400

seq1  ACATATAGACACATGTGTGCACACAATTTTTGTTTGTTTGTTTGTTTGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATATAGACACATGTGTGCACACAATTTTTGTTTGTTTGTTTGTTTGTT  450

seq1  TGAGACAGGGTTTCTCTGTATAGTCCTGGGTGTCCTGGAACTCACTCTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGACAGGGTTTCTCTGTATAGTCCTGGGTGTCCTGGAACTCACTCTGT  500

seq1  AGACCAGGCTGGCCTCGAACTCAGAAATCTGCCTGCCTCTGCCTCCCGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCAGGCTGGCCTCGAACTCAGAAATCTGCCTGCCTCTGCCTCCCGAG  550

seq1  TGCTGGGATTAAAGGCGTGCGCCCCCACTGCCTTTTTTTAAAGTAAATTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGGGATTAAAGGCGTGCGCCCCCACTGCCTTTTTTTAAAGTAAATTT  600

seq1  TTAAAAAGGACAGCTATTACC-TTACCATTTCATATACATACCCAAAACT  649
      || |||||||||||||||||| ||||||||||||||||||||||||||||
seq2  TTTAAAAGGACAGCTATTACCTTTACCATTTCATATACATACCCAAAACT  650

seq1  TGTCCAC-TTTTCCTACACTGGTGTGCTCTAACTTGAC  686
      ||||||| ||||||||||||||||||||||||||||||
seq2  TGTCCACTTTTTCCTACACTGGTGTGCTCTAACTTGAC  688