BAC Information

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BAC

Clone NameB6Ng01-017C19
Chromosome3 (Build37)
Map Location 81,551,902 - 81,552,782
singlet/doubletsinglet
Overlap genenone
Upstream geneGria2, Glrb, EG626841, Pdgfc, LOC229443
Downstream geneLOC100041901, Ctso, Tdo2, Accn5, Gucy1b3, Gucy1a3, Mtap9, Npy2r, LOC100041940
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-017C19.bB6Ng01-017C19.g
ACCDH850932DH850933
length1,042882
definitionDH850932|Mus musculus domesticus DNA, BAC clone: B6Ng01-017C19, 5' end.DH850933|Mus musculus domesticus DNA, BAC clone: B6Ng01-017C19, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttagctctgtactccattttaaaatagggtttatttggt
tctatggagtctaagttttttagttctttgtatatattggatattagccc
tctaccaaaagtaagatttgtaaagatctcccaaactgttggttgccgtt
ttgttctgttgagagtatcttttgccttacagaagctttgcaattttatg
cagtcccacttgttgatttttgaacttagagcataagccattggtgttct
taaagcataagccattggtgttctgttcaggaaaatttcccctgtgctca
tgtgtttcagtctcttcctcactgtctcttctatgagattcagtgtctca
ggttatatgtggaagtccttgatccccttggacttgagctttgtacaagg
agataagaatggatcaatgtgcattcttctacatgctgatcaccagttga
actagcagcatttgatgagaatgctgtctttttttccactggatggtttt
cactccattgtcaaagatcgagtgaccataagtgtgtaagtttatttctg
ggtcttcaattttattccatttatctacctgcctgtctctataccagtac
catatagcctttatcactattgctctgtaatatagcttgaggtaagggat
ggtgatccccccccccagaattcttttatttttgctatcctgagcttttt
tgttattccaaatgaatttgcaaattgctctttctaactctatgaagaaa
tgagttaaaattttgatagagattgcattatatctgtagatgaccattta
taactctattaatcctgccaatccatgagcatgggatatcttttccatct
tctgaaatcttcttccatctttttctttcagagccttgaagtttttgtca
tacatatcttttcacttgcttggttagagtcacatcaatgtattttatat
tattgtggctattgtgaaggtgttgtttcctaatttctttcttcagcctg
ttatctttagaagaggaggaaggctcacctgaattatttgag
gaattccacctttgttgaaatacagttgatgactggcaaagcaaccccta
tttttagcactcgtggaatgcactgccatgatgttagtagaattttaaaa
gtttaaagagttgagatgttatggttggatcttaaatgaaccccaaagac
ccatgtgttatttgccagcttgggagcatacagggatatagtggctcatc
taagaggcagagtctagtgatgggtcttcaagtcattggtggtatgactt
agaatggatactggaatccaggacctttttttccttctgtttttgaagtg
tgcatcaccatgatgcctctcctcaatacaggtgtcagatcaaccctgac
agtagagccaaaaaacaaaacaacaaacaaaaaatgttccctccttctaa
attgtttgtctcaggtgctttgtgacagggacaggaacactgactaacac
attgttgtgttgtaatacaaaatatttcctagggagactcacataaatct
attcaccctagaaaacagtccccaaacaaaccataatatggataacactg
aaatctgagttatgaactaatgaatttttggagggttgcttacagataca
tgattgagaggttatttacaggggaagaacttacttaaaaacaaccatat
catcaaattcctccccagcgtgggagagagttcacaacacctagcaacct
ttgagtatgtacaggcagcaggaggacaaacaagttggagactgtcctta
ccatgtgttaacaagcagcctggctggttctgctgcttgcagcagttcga
atggtctttccttgtttgtggcttggcttctttgacagtcttcttcgcag
ttcaagtacattcttctgcagtttttgttgtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_81551902_81552782
seq2: B6Ng01-017C19.g_66_947

seq1  GAATTCCACCTTTGTTGAAATACAGTTGATGACTGGCAAAGCAACCCCTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACCTTTGTTGAAATACAGTTGATGACTGGCAAAGCAACCCCTA  50

seq1  TTTTTAGCACTCGTGGAATGCACTGCCATGATGTTAGTAGAATTTTAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTAGCACTCGTGGAATGCACTGCCATGATGTTAGTAGAATTTTAAAA  100

seq1  GTTTAAAGAGTTGAGATGTTATGGTTGGATCTTAAATGAACCCCAAAGAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTAAAGAGTTGAGATGTTATGGTTGGATCTTAAATGAACCCCAAAGAC  150

seq1  CCATGTGTTATTTGCCAGCTTGGGAGCATACAGGGATATAGTGGCTCATC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGTGTTATTTGCCAGCTTGGGAGCATACAGGGATATAGTGGCTCATC  200

seq1  TAAGAGGCAGAGTCTAGTGATGGGTCTTCAAGTCATTGGTGGTATGACTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAGGCAGAGTCTAGTGATGGGTCTTCAAGTCATTGGTGGTATGACTT  250

seq1  AGAATGGATACTGGAATCCAGGACCTTTTTTTCCTTCTGTTTTTGAAGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATGGATACTGGAATCCAGGACCTTTTTTTCCTTCTGTTTTTGAAGTG  300

seq1  TGCATCACCATGATGCCTCTCCTCAATACAGGTGTCAGATCAACCCTGAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATCACCATGATGCCTCTCCTCAATACAGGTGTCAGATCAACCCTGAC  350

seq1  AGTAGAGCCAAAAAACAAAACAACAAACAAAAAATGTTCCCTCCTTCTAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGAGCCAAAAAACAAAACAACAAACAAAAAATGTTCCCTCCTTCTAA  400

seq1  ATTGTTTGTCTCAGGTGCTTTGTGACAGGGACAGGAACACTGACTAACAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTTTGTCTCAGGTGCTTTGTGACAGGGACAGGAACACTGACTAACAC  450

seq1  ATTGTTGTGTTGTAATACAAAATATTTCCTAGGGAGACTCACATAAATCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTTGTGTTGTAATACAAAATATTTCCTAGGGAGACTCACATAAATCT  500

seq1  ATTCACCCTAGAAAACAGTCCCCAAACAAACCATAATATGGATAACACTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCACCCTAGAAAACAGTCCCCAAACAAACCATAATATGGATAACACTG  550

seq1  AAATCTGAGTTATGAACTAATGAATTTTTGGAGGGTTGCTTACAGATACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCTGAGTTATGAACTAATGAATTTTTGGAGGGTTGCTTACAGATACA  600

seq1  TGATTGAGAGGTTATTTACAGGGGAAGAACTTACTTAAAAACAACCATAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTGAGAGGTTATTTACAGGGGAAGAACTTACTTAAAAACAACCATAT  650

seq1  CATCAAATTCCTCCCCAGCGTGGGAGAGAGTTCACAACACCTAGCAACC-  699
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  CATCAAATTCCTCCCCAGCGTGGGAGAGAGTTCACAACACCTAGCAACCT  700

seq1  TTGAGTATGTACAGGCAGCAGGAGGACAAACAAGTTGGAGACTGTCCTTA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGTATGTACAGGCAGCAGGAGGACAAACAAGTTGGAGACTGTCCTTA  750

seq1  CCATGTGTTAACAAGCAGCCTGGCTGGTTTCTGCTGCTTGCAGCAGTTCG  799
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  CCATGTGTTAACAAGCAGCCTGGCTGG-TTCTGCTGCTTGCAGCAGTTCG  799

seq1  AATGGTCTTTCCTTGTTTGT-GCTTGGCTTCTTTGACAGTCTTCTTCGCA  848
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  AATGGTCTTTCCTTGTTTGTGGCTTGGCTTCTTTGACAGTCTTCTTCGCA  849

seq1  GTTCAAGTACATTCTTCTGCAGTTTTTGTTGTT  881
      |||||||||||||||||||||||||||||||||
seq2  GTTCAAGTACATTCTTCTGCAGTTTTTGTTGTT  882