BAC Information

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BAC

Clone NameB6Ng01-017N10
Chromosome3 (Build37)
Map Location 41,058,930 - 41,059,444
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040882, Intu, Slc25a31, Hspa4l, Plk4, Mfsd8, LOC100039027, LOC100039043, 3110057O12Rik, 1700034I23Rik, Larp2, Pgrmc2
Downstream geneEG666004, Ppia-ps3_337.1, LOC100039115, Phf17, Sclt1, D3Ertd751e, LOC666031
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-017N10.bB6Ng01-017N10.g
ACCDH851400DH851401
length823599
definitionDH851400|Mus musculus domesticus DNA, BAC clone: B6Ng01-017N10, 5' end.DH851401|Mus musculus domesticus DNA, BAC clone: B6Ng01-017N10, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttgtttagctctaagccccatttttttaatggtgttatttgat
tttctggaatccaccttcttgagttctttatatatattggatattagtac
cctatctgatttaggatagataaagatcttttcccaaacttttggtggtc
tttttgtcttattgacagtgtcttttgccttgcagaagctttgcaacttt
atgaggcccatttatcgattctcaatcttacagcacacgccattgctgtt
ctattcaggaatttttcccctgtacacatatctttgaggcttttccctac
tttctcctctataagtttcagtgtatctggttttatgtggatttccttaa
tccacttatatttgaccttagtacaaggagataggaatggatcaaatcac
attcttctacatgataactgccagttgtgccagcaccatttgttgaaaat
gctgtcttttttccactggatggttttagctcccttgtcaaagatcacct
gaccataggtggatggattcatctcagggtcttcagttctgttccattgg
tctacttgtctgtcgctataccagtaccatgcagtttttatcacaattgc
tctgtagtacagctttaggtcaggcatcgtgattccaccaggggtacttt
tatccttgagaagagtttttactatcctaggttttttttttttttttttt
taattccagatgaatttgcagattgctccttcttattcgttgaagaattg
agttggaattttgatggggattgcattgaatctgtagattgcttttggca
agatagccagtttttacaatgtt
gaattccattgttttccaagatgatccttattgttactggatttgtatct
ccaaggagccttgtttgaatgtcccagaattctgctaagaatcacttcct
gtagcctagcataacgatcatcagagaggcttcacccagcagctgatgga
aacagatgcagagtcctatagtcaaacactaagtggaccttggggaatcc
tgtggaagaaagaatcgaaggagtctggggtgacaagaaaacctacagaa
tcaacacatctgggcccatgggtgcttataaagattgaactgcttacaag
tgataatgcatgggatggacctaggccctctgcatgtatgttagcagttg
tacacttgtgtcttcatgtgggactccaaaagtggtagtaggggctgttt
ctgatgactttgcctgcctttggatactttccccctaactgggatgccat
gtctagcctcaatagaagaagacatgcctagtcttaatgctacttaatgc
taattgatataccaaggctagtggatatgcatatgaggccttcctttttc
tcagtagaaggggaggaagaatgaattttggaaaggggaaggggaaagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_41058930_41059444
seq2: B6Ng01-017N10.b_343_870 (reverse)

seq1  AACATTGTAAAAA-TGGCTATCTTGCCAAAAGCAATCTACAGATTCAATG  49
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  AACATTGTAAAAACTGGCTATCTTGCCAAAAGCAATCTACAGATTCAATG  50

seq1  CAATCCCCATCAAAATTCCAACTCAATTCTTCAACGAATTTGAAAGAGCA  99
      |||||||||||||||||||||||||||||||||||||||  ||| |||||
seq2  CAATCCCCATCAAAATTCCAACTCAATTCTTCAACGAATAAGAAGGAGCA  100

seq1  ATCTGCAAATTCATCTGGAAT------------AACAAAAAACCTAGGAT  137
      |||||||||||||||||||||            || ||||||||||||||
seq2  ATCTGCAAATTCATCTGGAATTAAAAAAAAAAAAAAAAAAAACCTAGGAT  150

seq1  AGCAAAAACTCTTCTCAAGGATAACAGAACCTCTGGTGGAATCACCATGC  187
      || ||||||||||||||||||||| || ||| ||||||||||||| ||||
seq2  AGTAAAAACTCTTCTCAAGGATAAAAGTACCCCTGGTGGAATCACGATGC  200

seq1  CTGACCTAAAGCTTTACTACAGAGCAATTGTGATAAAAACTGCATGGTAC  237
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  CTGACCTAAAGCTGTACTACAGAGCAATTGTGATAAAAACTGCATGGTAC  250

seq1  TGGTATAGTGACAGACAAGCAGACCAATGGAATAGAATTGAAGACTCAGA  287
      |||||||| |||||||||| |||||||||||| |||| ||||||| | ||
seq2  TGGTATAGCGACAGACAAGTAGACCAATGGAACAGAACTGAAGACCCTGA  300

seq1  AACGAATCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGCTAAAA  337
       | |||||||  ||||||||||||  ||||||| ||||||||||||||||
seq2  GATGAATCCATCCACCTATGGTCAGGTGATCTTTGACAAGGGAGCTAAAA  350

seq1  CCATCCAGTGGAAAAAAGACAGCATTTTCAACAAATGGTGCTGGCACAAC  387
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCCAGTGGAAAAAAGACAGCATTTTCAACAAATGGTGCTGGCACAAC  400

seq1  TGGTTGTTATCATGTAGAAGAATGCGAATTGATCCACTCCTATCTCCTTG  437
      |||  ||||||||||||||||||| || |||||||| |||||||||||||
seq2  TGGCAGTTATCATGTAGAAGAATGTGATTTGATCCATTCCTATCTCCTTG  450

seq1  TACTAAGGTCAAATCTAAGTGGATCAAGGAACGCCACATAAAACCAGAGA  487
      |||||||||||||| ||||||||| ||||||  ||||||||||||||| |
seq2  TACTAAGGTCAAATATAAGTGGATTAAGGAAATCCACATAAAACCAGATA  500

seq1  CACTGAAACTTATAGAGGAGAAAGTGGG  515
      ||||||||||||||||||||||||| ||
seq2  CACTGAAACTTATAGAGGAGAAAGTAGG  528