BAC Information

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BAC

Clone NameB6Ng01-017N24
Chromosome3 (Build37)
Map Location 118,088,866 - 118,270,982
singlet/doubletdoublet
Overlap geneDpyd
Upstream gene4833424O15Rik, EG668759, Snx7, LOC100043260
Downstream geneLOC100043275
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-017N24.bB6Ng01-017N24.g
ACCDH851427DH851428
length586488
definitionDH851427|Mus musculus domesticus DNA, BAC clone: B6Ng01-017N24, 5' end.DH851428|Mus musculus domesticus DNA, BAC clone: B6Ng01-017N24, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(118,270,391 - 118,270,982)(118,088,866 - 118,089,359)
sequence
taattaggacatagattggttttttttttttttttggtttaggtggtggt
taaatgcacaaaatatatccaacactaatggtgtagaatccaatgtgaag
ttgtacaacttccattctgaatacgtttctaacttaatgttttaatgcaa
tgttacttttcaaatagtaaccacgatataaaagttgacattttaaaaaa
taaattctcacaaaatctcttagttctaaactctagtagacaactatact
aaagcatgtaaaagagaagtttttaattgttttaaaatatacacacttat
tacccatgaatgcagtattttaagaaagaataacaaaagcaaaaatgatc
acaaattacaggaaatacatgaagctattcaaagttatctcagtagcaca
attgtctccggcgtaaatctgaacacacacactcctgatgggtgaggtca
gaaaccaccttctgtcttgagaaagaaaattaaaagcaaatgacattgaa
aaacaaaacatgtcatatttgaaaagtaaaactcttggttataaatacat
ttactagtaacaagggtttcattacacatattaatt
caacaaaatttaatgtgtctcaatgttcccagaatacatacacatgcaac
aaacataggaactgtagatgaacattactattgtcaaacattgtcaggtt
gcctattccttttattctccatctcagtaatagaagagaatgccagtagt
gtatgtaggataggagtagtgattggtaaagtctgcctgagtagtgcctc
tccatgaatcatcccatacaaatgccaccctagtgagaaagacactcccc
aacatctcccatgccatcgatgtctgctgtccccatggactcctgtattt
tctcttcttatcatctgcagagaaatataaggaacttatccgtgccctct
ttctttttcaaagtttgtggcttcttcactgggtctgtgccttaattgtt
tagctattactgcggcaaaagcccagcaaaagaaacttaagggaaatgaa
ggttgtttcggcttcaagattctgatataatccatctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_118270391_118270982
seq2: B6Ng01-017N24.b_47_638 (reverse)

seq1  AATTAATATGTGTAATGAAACACTTGTTACTTGTAAATGTATTTATAACC  50
      ||||||||||||||||||||| ||||||||| ||||||||||||||||||
seq2  AATTAATATGTGTAATGAAACCCTTGTTACTAGTAAATGTATTTATAACC  50

seq1  AAGAGTTTTACTTTTCAAATATGACATGTTTTGTTTTTCAATGTCATTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGTTTTACTTTTCAAATATGACATGTTTTGTTTTTCAATGTCATTTG  100

seq1  CTTTTAATTTTCTTTCTCAAGACAGAAGGTGGTTTCTGGCCTCACCCATC  150
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  CTTTTAATTTTCTTTCTCAAGACAGAAGGTGGTTTCTGACCTCACCCATC  150

seq1  AGGAGTGTGTGTGTTCAGATTTACGCCGGAGACAATTGTGCTACTGAGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGTGTGTGTGTTCAGATTTACGCCGGAGACAATTGTGCTACTGAGAT  200

seq1  AACTTTGAATAGCTTCATGTATTTCCTGTAATTTGTGATCATTTTTGCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTTGAATAGCTTCATGTATTTCCTGTAATTTGTGATCATTTTTGCTT  250

seq1  TTGTTATTCTTTCTTAAAATACTGCATTCATGGGTAATAAGTGTGTATAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTATTCTTTCTTAAAATACTGCATTCATGGGTAATAAGTGTGTATAT  300

seq1  TTTAAAACAATTAAAAACTTCTCTTTTACATGCTTTAGTATAGTTGTCTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAACAATTAAAAACTTCTCTTTTACATGCTTTAGTATAGTTGTCTA  350

seq1  CTAGAGTTTAGAACTAAGAGATTTTGTGAGAATTTATTTTTTAAAATGTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAGTTTAGAACTAAGAGATTTTGTGAGAATTTATTTTTTAAAATGTC  400

seq1  AACTTTTATATCGTGGTTACTATTTGAAAAGTAACATTGCATTAAAACAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTTTATATCGTGGTTACTATTTGAAAAGTAACATTGCATTAAAACAT  450

seq1  TAAGTTAGAAACGTATTCAGAATGGAAGTTGTACAACTTCACATTGGATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTTAGAAACGTATTCAGAATGGAAGTTGTACAACTTCACATTGGATT  500

seq1  CTACACCATTAGTGTTGGATATATTTTGTGCATTTAACCACCACCTAAAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACACCATTAGTGTTGGATATATTTTGTGCATTTAACCACCACCTAAAC  550

seq1  CAAAAAAAAAAAAAAAACCAATCTATGTCCTAATTAGAATTC  592
      ||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAAAAAAAAAAAAACCAATCTATGTCCTAATTAGAATTC  592

seq1: chr3_118088866_118089359
seq2: B6Ng01-017N24.g_68_561

seq1  GAATTCCAACAAAATTTAATGTGTCTCAATGTTCCCAGAATACATACACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAACAAAATTTAATGTGTCTCAATGTTCCCAGAATACATACACA  50

seq1  TGCAACAAACATAGGAACTGTAGATGAACATTACTATTGTCAAACATTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAACAAACATAGGAACTGTAGATGAACATTACTATTGTCAAACATTGT  100

seq1  CAGGTTGCCTATTCCTTTTATTCTCCATCTCAGTAATAGAAGAGAATGCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTTGCCTATTCCTTTTATTCTCCATCTCAGTAATAGAAGAGAATGCC  150

seq1  AGTAGTGTATGTAGGATAGGAGTAGTGATTGGTAAAGTCTGCCTGAGTAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGTGTATGTAGGATAGGAGTAGTGATTGGTAAAGTCTGCCTGAGTAG  200

seq1  TGCCTCTCCATGAATCATCCCATACAAATGCCACCCTAGTGAGAAAGACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTCTCCATGAATCATCCCATACAAATGCCACCCTAGTGAGAAAGACA  250

seq1  CTCCCCAACATCTCCCATGCCATCGATGTCTGCTGTCCCCATGGACTCCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCCAACATCTCCCATGCCATCGATGTCTGCTGTCCCCATGGACTCCT  300

seq1  GTATTTTCTCTTCTTATCATCTGCAGAGAAATATAAGGAACTTATCCGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTTTCTCTTCTTATCATCTGCAGAGAAATATAAGGAACTTATCCGTG  350

seq1  CCCTCTTTCTTTTTCAAAGTTTGTGGCTTCTTCACTGGGTCTGTGCCTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCTTTCTTTTTCAAAGTTTGTGGCTTCTTCACTGGGTCTGTGCCTTA  400

seq1  ATTGTTTAGCTATTACTGTGGCAAAAGCCCAGCAAAAGAAACTTAAGGGA  450
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  ATTGTTTAGCTATTACTGCGGCAAAAGCCCAGCAAAAGAAACTTAAGGGA  450

seq1  AATGAAGGTTGTTTCGGCTTCAAGATTCTGATATAATCCATCTT  494
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAAGGTTGTTTCGGCTTCAAGATTCTGATATAATCCATCTT  494