BAC Information

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BAC

Clone NameB6Ng01-017P23
Chromosome3 (Build37)
Map Location 23,787,132 - 23,934,283
singlet/doubletdoublet
Overlap geneEG635702
Upstream geneLOC623751, LOC100039548
Downstream geneEG665189
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-017P23.bB6Ng01-017P23.g
ACCDH851517DH851518
length352827
definitionDH851517|Mus musculus domesticus DNA, BAC clone: B6Ng01-017P23, 5' end.DH851518|Mus musculus domesticus DNA, BAC clone: B6Ng01-017P23, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(23,787,132 - 23,787,489)(23,933,457 - 23,934,283)
sequence
acagaaaattagaaataataattttggcttatattcatttttgaacataa
gaaataactgaatatgagagaaacttacctaatcacttacagatacctaa
agcctttttaggaagtgtaactataaaaatatatttaagagaatacttga
gatacatgtatatgtgtataggcttgtgcagtttaaatttgaacactaaa
aatatacaggtatacatataaatgatttatataaatatcttacatatatg
tgcatatactttaaaaatctgaaattatacaaatacacacacgtatatat
ttatatatatttatatatatttatatgtatatatatatgtatatatatat
at
gaattcctgacagataataaattgattattatgtatgatataacttataa
agtattattatataaaatatatacctatagttttgaagaaccagagcctt
aaataactcatcttacctttgttctttctctatatgtataagcatatact
ttttccatataggtatatatctttgtatgcatatgctttgtattatatcc
atgtaaatatataattattaaatgtaattaaaagtaatgggaatgtagaa
atccagctaaaatatataaataattgccaaactatgataattttactttc
tttgctactaagttctttaaaaactactacactttacacacagatgggct
ttatttttcttttgtagttctaattgatggacatgaaatacaaaggaagg
gaagaatgcagtcatatggggtgagggtggcaaggaaggacttttctgta
tttagtataaagaaagtcaggtaaaagaatacagaagaaggagggaaaga
ggaagagcaggaagaaaacatttggtaagtagggaggtaagagtaaaaca
tgtggattttagaggactctaaaggagcgaatatgggcaaaacgtatgaa
attctcagctattcaaaattatatcatttaaagaaaaagaaatctcaagc
caggcaatggtggcgcatgcctttaatcccagcacttatgaagcagaggc
aggcatatttctgcgtttgaggccagcctggtctacagagtgatttcaag
gacatctagggctacacagagaaaccctgtctcagaaaagagagagagag
agagagatagagagagagagatagaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_23787132_23787489
seq2: B6Ng01-017P23.b_46_403

seq1  GAATTCACAGAAAATTAGAAATAATAATTTTGGCTTATATTCATTTTTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACAGAAAATTAGAAATAATAATTTTGGCTTATATTCATTTTTGA  50

seq1  ACATAAGAAATAACTGAATATGAGAGAAACTTACCTAATCACTTACAGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAAGAAATAACTGAATATGAGAGAAACTTACCTAATCACTTACAGAT  100

seq1  ACCTAAAGCCTTTTTAGGAAGTGTAACTATAAAAATATATTTAAGAGAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTAAAGCCTTTTTAGGAAGTGTAACTATAAAAATATATTTAAGAGAAT  150

seq1  ACTTGAGATACATGTATATGTGTATAGGCTTGTGCAGTTTAAATTTGAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGAGATACATGTATATGTGTATAGGCTTGTGCAGTTTAAATTTGAAC  200

seq1  ACTAAAAATATACAGGTATACATATAAATGATTTATATAAATATCTTACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAAAATATACAGGTATACATATAAATGATTTATATAAATATCTTACA  250

seq1  TATATGTGCATATACTTTAAAAATCTGAAATTATACAAATACACACACGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATGTGCATATACTTTAAAAATCTGAAATTATACAAATACACACACGT  300

seq1  ATATATTTATATATATTTATATATATTTATATGTATATATATATGTATAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATTTATATATATTTATATATATTTATATGTATATATATATGTATAT  350

seq1  ATATATAT  358
      ||||||||
seq2  ATATATAT  358

seq1: chr3_23933457_23934283
seq2: B6Ng01-017P23.g_67_893 (reverse)

seq1  TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTTCTGAGACA  50
      ||||| ||||||||||||| ||||||||||||||||||||||||||||||
seq2  TCTCTATCTCTCTCTCTCTATCTCTCTCTCTCTCTCTCTTTTCTGAGACA  50

seq1  GGGTTTCTCTGTGTAGCCCTAGATGTCCTTGAAATCACTCTGTAGACCAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTTCTCTGTGTAGCCCTAGATGTCCTTGAAATCACTCTGTAGACCAG  100

seq1  GCTGGCCTCAAACGCAGAAATATGCCTGCCTCTGCTTCATAAGTGCTGGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGCCTCAAACGCAGAAATATGCCTGCCTCTGCTTCATAAGTGCTGGG  150

seq1  ATTAAAGGCATGCGCCACCATTGCCTGGCTTGAGATTTCTTTTTCTTTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAAGGCATGCGCCACCATTGCCTGGCTTGAGATTTCTTTTTCTTTAA  200

seq1  ATGATATAATTTTGAATAGCTGAGAATTTCATACGTTTTGCCCATATTCG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATATAATTTTGAATAGCTGAGAATTTCATACGTTTTGCCCATATTCG  250

seq1  CTCCTTTAGAGTCCTCTAAAATCCACATGTTTTACTCTTACCTCCCTACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTTTAGAGTCCTCTAAAATCCACATGTTTTACTCTTACCTCCCTACT  300

seq1  TACCAAATGTTTTCTTCCTGCTCTTCCTCTTTCCCTCCTTCTTCTGTATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCAAATGTTTTCTTCCTGCTCTTCCTCTTTCCCTCCTTCTTCTGTATT  350

seq1  CTTTTACCTGACTTTCTTTATACTAAATACAGAAAAGTCCTTCCTTGCCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTACCTGACTTTCTTTATACTAAATACAGAAAAGTCCTTCCTTGCCA  400

seq1  CCCTCACCCCATATGACTGCATTCTTCCCTTCCTTTGTATTTCATGTCCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCACCCCATATGACTGCATTCTTCCCTTCCTTTGTATTTCATGTCCA  450

seq1  TCAATTAGAACTACAAAAGAAAAATAAAGCCCATCTGTGTGTAAAGTGTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATTAGAACTACAAAAGAAAAATAAAGCCCATCTGTGTGTAAAGTGTA  500

seq1  GTAGTTTTTAAAGAACTTAGTAGCAAAGAAAGTAAAATTATCATAGTTTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTTTTTAAAGAACTTAGTAGCAAAGAAAGTAAAATTATCATAGTTTG  550

seq1  GCAATTATTTATATATTTTAGCTGGATTTCTACATTCCCATTACTTTTAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATTATTTATATATTTTAGCTGGATTTCTACATTCCCATTACTTTTAA  600

seq1  TTACATTTAATAATTATATATTTACATGGATATAATACAAAGCATATGCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACATTTAATAATTATATATTTACATGGATATAATACAAAGCATATGCA  650

seq1  TACAAAGATATATACCTATATGGAAAAAGTATATGCTTATACATATAGAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAAGATATATACCTATATGGAAAAAGTATATGCTTATACATATAGAG  700

seq1  AAAGAACAAAGGTAAGATGAGTTATTTAAGGCTCTGGTTCTTCAAAACTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAACAAAGGTAAGATGAGTTATTTAAGGCTCTGGTTCTTCAAAACTA  750

seq1  TAGGTATATATTTTATATAATAATACTTTATAAGTTATATCATACATAAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTATATATTTTATATAATAATACTTTATAAGTTATATCATACATAAT  800

seq1  AATCAATTTATTATCTGTCAGGAATTC  827
      |||||||||||||||||||||||||||
seq2  AATCAATTTATTATCTGTCAGGAATTC  827