BAC Information

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BAC

Clone NameB6Ng01-018D03
Chromosome3 (Build37)
Map Location 64,702,184 - 64,865,946
singlet/doubletdoublet
Overlap geneLOC670110
Upstream geneLOC100040836, E130311K13Rik, Slc33a1, Gmps, LOC670032, EG56544, 4930518C23Rik, LOC380739, EG637004, EG667031, EG637053, LOC672951, EG639869, EG667060, EG667069, LOC100040918, 4933425M15Rik
Downstream geneKcnab1, Ssr3, EG433604, EG667093, LOC100041083, 4931440P22Rik, Tiparp, LOC545530, LOC100040978, EG624866, Ccnl1, LOC625048, Veph1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-018D03.bB6Ng01-018D03.g
ACCDH851665DH851666
length9961,020
definitionDH851665|Mus musculus domesticus DNA, BAC clone: B6Ng01-018D03, 5' end.DH851666|Mus musculus domesticus DNA, BAC clone: B6Ng01-018D03, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(64,702,184 - 64,703,181)(64,864,933 - 64,865,946)
sequence
gaattccaatcacagaagacagtacagcatggtaagaggagactccagtc
tttccttgaacccctgaatgactattaacataaattcatttcattgacta
acataaactcagcccaagtagtgttttcacgttcaccaatactttccctt
agactctaaggttgagtctccatccagacggacttctcttcttagcctca
gaaaatatggctgctagttgtatttcccttcttatccttaccctctctac
caactcagatctgatatagggttggaaatatctaaatgggcagctataat
attttcttctctgaagggatattgaatgaaaggttgaaaacacagggatt
taaacaacattgtacaaatcaaaatcttgttgattgttttttaccacagt
agttattcatctcatttatgattgttttgagctttatggagaaggaaaag
gagcatgttagtgtaaaagatcaactcataagaagctgaaatggaaaaga
agggctaaattcctaaaattaaacgtaattctcaacctctagagggagct
gtactttgtcagtgcaatgtgagtcaaagggaatgtgatccatgtgaagt
tcctcacttatgaggaggccctggggttccccctcattatccttttcatc
attggggcacttgtggtcttggcagtcactgttgtgtatgtgatccacag
gcacactccattggtgaaagccaatgagcaggagctgagctttcctcgtt
catatgtctctgggaatcacagtgctgttaaccatgcagttcacaggcat
agccacgcagctggtcctgcatggcccaccagatctctctggaactcggc
ttttgcccttgtctgttctattctcagaaagaatatttcactcttatttt
gcccacaggatttcaatatccaaaaccagggctttatccatgtactacat
ttacaaaactcatgtgctgatctgtgttgtagggagattgttgtat
gaattccaagacagctttggcgagataaagaagatctttccccaagaacc
aaacacaacgaaagtaactacatggtggtcaatttgcttttttgttttgt
ttctactttttttttcaatgcatttgtttaaaaaatcaacccccctctgc
tcagtaattggaataatttcacattttatggaatgaaatttgtgtttaga
gttgaagataaacttgataaagactcgagctaaattactgtaattttacc
tttggcaaatattaacaggaaacgctaaaaaataataaattcttggagtt
gtgatattggagaataaaaaaaatcattcccacctcaatgtcagctcaaa
gtttggacgctaccccagttccagagaacttccaatgcttaggcataggt
cataccaatcagtgacacatctgccagctgagctgctctactccccagat
tcagtcctcaaagacacactccaccactgtccctgtgcccccatacacct
tactacccaccctactgccagacctctgccaccaactccttcatgaagcc
ttcagttgctcaagtacaggccacacccaccaaaagaacagtgactccct
gttacaccaaaggctaggctagttgccataagtccagcaccaatcttgac
agactctctactggatcagagatcatgccatctccccaggaatctgggcc
acaaagaacagaaggccaaagagcaaacagaaaccaagtgaaaaacaaaa
catccatcaacaaagacaaactcagaaatcaggacctagacctataatca
tcccaaccccagatgcctcaatgccagtataaaggacacagccagtagca
acaatggcatttatggaataaccagagcatagcgatcttatgatagatct
tctgaagcacaagaaaatgccttaaaaccaacttttatgaagaggatagt
ggtccttaaaaggaaatgaaaaagatctcttaagaatgtaggaaagacaa
aagatgatgagtagaaagaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_64702184_64703181
seq2: B6Ng01-018D03.b_46_1041

seq1  GAATTCCAATCACAGAAGACAGTACAGCATGGTAAGAGGAGACTCCAGTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAATCACAGAAGACAGTACAGCATGGTAAGAGGAGACTCCAGTC  50

seq1  TTTCCTTGAACCCCTGAATGACTATTAACATAAATTCATTTCATTGACTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTTGAACCCCTGAATGACTATTAACATAAATTCATTTCATTGACTA  100

seq1  ACATAAACTCAGCCCAAGTAGTGTTTTCACGTTCACCAATACTTTCCCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAAACTCAGCCCAAGTAGTGTTTTCACGTTCACCAATACTTTCCCTT  150

seq1  AGACTCTAAGGTTGAGTCTCCATCCAGACGGACTTCTCTTCTTAGCCTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTCTAAGGTTGAGTCTCCATCCAGACGGACTTCTCTTCTTAGCCTCA  200

seq1  GAAAATATGGCTGCTAGTTGTATTTCCCTTCTTATCCTTACCCTCTCTAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATATGGCTGCTAGTTGTATTTCCCTTCTTATCCTTACCCTCTCTAC  250

seq1  CAACTCAGATCTGATATAGGGTTGGAAATATCTAAATGGGCAGCTATAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTCAGATCTGATATAGGGTTGGAAATATCTAAATGGGCAGCTATAAT  300

seq1  ATTTTCTTCTCTGAAGGGATATTGAATGAAAGGTTGAAAACACAGGGATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCTTCTCTGAAGGGATATTGAATGAAAGGTTGAAAACACAGGGATT  350

seq1  TAAACAACATTGTACAAATCAAAATCTTGTTGATTGTTTTTTACCACAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACAACATTGTACAAATCAAAATCTTGTTGATTGTTTTTTACCACAGT  400

seq1  AGTTATTCATCTCATTTATGATTGTTTTGAGCTTTATGGAGAAGGAAAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTATTCATCTCATTTATGATTGTTTTGAGCTTTATGGAGAAGGAAAAG  450

seq1  GAGCATGTTAGTGTAAAAGATCAACTCATAAGAAGCTGAAATGGAAAAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCATGTTAGTGTAAAAGATCAACTCATAAGAAGCTGAAATGGAAAAGA  500

seq1  AGGGCTAAATTCCTAAAATTAAACGTAATTCTCAACCTCTAGAGGGAGCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCTAAATTCCTAAAATTAAACGTAATTCTCAACCTCTAGAGGGAGCT  550

seq1  GTACTTTGTCAGTGCAATGTGAGTCAAAGGGAATGTGATCCATGTGAAGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTTTGTCAGTGCAATGTGAGTCAAAGGGAATGTGATCCATGTGAAGT  600

seq1  TCCTCACTTATGAGGAGGCCCTGGGGTTCCCCCTCATTATCCTTTTCATC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCACTTATGAGGAGGCCCTGGGGTTCCCCCTCATTATCCTTTTCATC  650

seq1  ATTGGGGCACTTGTGGTCTTGGCAGTCACTGTTGTGTATGTGATCCACAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGGGCACTTGTGGTCTTGGCAGTCACTGTTGTGTATGTGATCCACAG  700

seq1  GCACACTCCATTGGTGAAAGCCAATGAGCAGGAGCTGAGC-TTCCTCGTT  749
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  GCACACTCCATTGGTGAAAGCCAATGAGCAGGAGCTGAGCTTTCCTCGTT  750

seq1  CATATGTCTCTGGGAATCACAGTGCTGTTAACCATGCAGTTCACAGGCA-  798
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  CATATGTCTCTGGGAATCACAGTGCTGTTAACCATGCAGTTCACAGGCAT  800

seq1  AGCCACGCAGCTGGTCCTGCATGGCCCACCAGATCTCTCTGGAACTCGGC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCACGCAGCTGGTCCTGCATGGCCCACCAGATCTCTCTGGAACTCGGC  850

seq1  TTTTGCCCTTGTCTGTTCTATTCTCAGAAAGACTATTTCACTCTTATTTT  898
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  TTTTGCCCTTGTCTGTTCTATTCTCAGAAAGAATATTTCACTCTTATTTT  900

seq1  GCCCACAGGATTTCAATATCCAAAACCAGGCTTATATCCATGTACTACAT  948
      ||||||||||||||||||||||||||||||  | ||||||||||||||||
seq2  GCCCACAGGATTTCAATATCCAAAACCAGGGCTTTATCCATGTACTACAT  950

seq1  TTATCAAAAACTCATTGTGCTGATCTGTGTTGTAGGGGAGATTGGTGTAT  998
      |||   |||||||| ||||||||||||||||||| ||||||||| |||||
seq2  TTA--CAAAACTCA-TGTGCTGATCTGTGTTGTA-GGGAGATTGTTGTAT  996

seq1: chr3_64864933_64865946
seq2: B6Ng01-018D03.g_67_1086 (reverse)

seq1  TTCTTTC---------TTTTTTGTCTTTTCCTACATTTCTTTAAGAGATC  41
      |||||||         | ||||||| |||||||||||   ||||||||||
seq2  TTCTTTCTACTCATCATCTTTTGTC-TTTCCTACATT--CTTAAGAGATC  47

seq1  TTTTTCATTTCCCTTTTAAGGACCACTATCCTCTTCAT-AAAGTTGGTTT  90
      |||||||||| ||||||||||||||||||||||||||| |||||||| ||
seq2  TTTTTCATTT-CCTTTTAAGGACCACTATCCTCTTCATAAAAGTTGG-TT  95

seq1  TTAAGGTCATTTTCTTGTGCTTCAGAAGATCTATCATAAGATCGCTATGC  140
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGG-CATTTTCTTGTGCTTCAGAAGATCTATCATAAGATCGCTATGC  144

seq1  TCTGGTTATTCCAT-AATGCCATTGTTGCTACTGGCTGTGTCC-TTATAC  188
      |||||||||||||| |||||||||||||||||||||||||||| ||||||
seq2  TCTGGTTATTCCATAAATGCCATTGTTGCTACTGGCTGTGTCCTTTATAC  194

seq1  TGGCATTGAGGCATCTGGGGTTGGGATGATTATAGGTCTAGGTCCTGATT  238
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCATTGAGGCATCTGGGGTTGGGATGATTATAGGTCTAGGTCCTGATT  244

seq1  TCTGAGTTTGTCTTTGTTGATGGATGTTTTGTTTTTCACTTGGTTTCTGT  288
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAGTTTGTCTTTGTTGATGGATGTTTTGTTTTTCACTTGGTTTCTGT  294

seq1  TTGCTCTTTGGCCTTCTGTTCTTTGTGGCCCAGATTCCTGGGGAGATGGC  338
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTCTTTGGCCTTCTGTTCTTTGTGGCCCAGATTCCTGGGGAGATGGC  344

seq1  ATGATCTCTGATCCAGTAGAGAGTCTGTCAAGATTGGTGCTGGACTTATG  388
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATCTCTGATCCAGTAGAGAGTCTGTCAAGATTGGTGCTGGACTTATG  394

seq1  GCAACTAGCCTAGCCTTTGGTGTAACAGGGAGTCACTGTTCTTTTGGTGG  438
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACTAGCCTAGCCTTTGGTGTAACAGGGAGTCACTGTTCTTTTGGTGG  444

seq1  GTGTGGCCTGTACTTGAGCAACTGAAGGCTTCATGAAGGAGTTGGTGGCA  488
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGGCCTGTACTTGAGCAACTGAAGGCTTCATGAAGGAGTTGGTGGCA  494

seq1  GAGGTCTGGCAGTAGGGTGGGTAGTAAGGTGTATGGGGGCACAGGGACAG  538
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTCTGGCAGTAGGGTGGGTAGTAAGGTGTATGGGGGCACAGGGACAG  544

seq1  TGGTGGAGTGTGTCTTTGAGGACTGAATCTGGGGAGTAGAGCAGCTCAGC  588
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGGAGTGTGTCTTTGAGGACTGAATCTGGGGAGTAGAGCAGCTCAGC  594

seq1  TGGCAGATGTGTCACTGATTGGTATGACCTATGCCTAAGCATTGGAAGTT  638
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCAGATGTGTCACTGATTGGTATGACCTATGCCTAAGCATTGGAAGTT  644

seq1  CTCTGGAACTGGGGTAGCGTCCAAACTTTGAGCTGACATTGAGGTGGGAA  688
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGGAACTGGGGTAGCGTCCAAACTTTGAGCTGACATTGAGGTGGGAA  694

seq1  TGATTTTTTTTATTCTCCAATATCACAACTCCAAGAATTTATTATTTTTT  738
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTTTTTTATTCTCCAATATCACAACTCCAAGAATTTATTATTTTTT  744

seq1  AGCGTTTCCTGTTAATATTTGCCAAAGGTAAAATTACAGTAATTTAGCTC  788
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCGTTTCCTGTTAATATTTGCCAAAGGTAAAATTACAGTAATTTAGCTC  794

seq1  GAGTCTTTATCAAGTTTATCTTCAACTCTAAACACAAATTTCATTCCATA  838
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCTTTATCAAGTTTATCTTCAACTCTAAACACAAATTTCATTCCATA  844

seq1  AAATGTGAAATTATTCCAATTACTGAGCAGAGGGGGGTTGATTTTTTAAA  888
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTGAAATTATTCCAATTACTGAGCAGAGGGGGGTTGATTTTTTAAA  894

seq1  CAAATGCATTGAAAAAAAAAGTAGAAACAAAACAAAAAAGCAAATTGACC  938
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATGCATTGAAAAAAAAAGTAGAAACAAAACAAAAAAGCAAATTGACC  944

seq1  ACCATGTAGTTACTTTCGTTGTGTTTGGTTCTTGGGGAAAGATCTTCTTT  988
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATGTAGTTACTTTCGTTGTGTTTGGTTCTTGGGGAAAGATCTTCTTT  994

seq1  ATCTCGCCAAAGCTGTCTTGGAATTC  1014
      ||||||||||||||||||||||||||
seq2  ATCTCGCCAAAGCTGTCTTGGAATTC  1020