BAC Information

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BAC

Clone NameB6Ng01-019D13
Chromosome3 (Build37)
Map Location 45,387,281 - 45,387,810
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC676484, LOC100039296, Pcdh10, LOC100039282
Downstream geneLOC433580, LOC671801, EG241989
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-019D13.bB6Ng01-019D13.g
ACCDH852376DH852377
length888428
definitionDH852376|Mus musculus domesticus DNA, BAC clone: B6Ng01-019D13, 5' end.DH852377|Mus musculus domesticus DNA, BAC clone: B6Ng01-019D13, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttgttcacttctgagccccatttttaatggggttatttgattt
tctggagtccaccttcttgagttttttatatatattggatattagtcccc
tatctgatttaggataggtaaagatcctttctcagtctgttggtggactt
tttgtcttattaacagtgtcttttgccttacagaagctttgcagtttcat
gaggtcccatttgtcaattctcgatcttacagcacaagccattgctgttc
tattcaggaatttttcccctgtgaccatatcttcgaggcttttccccact
ttctcctctataagttttagtgtctctggttttatgtggagttccttgat
ccacttagatttgactttagtacaaggaggtaggaatgaattcttctaca
tgataactaccagttgtgccagaaccatttgttgaaaatgctgtcttttt
tccactggatggttttagcacccttgtcgaagatcaagtgaccataggtg
tgtgggtttatttctgggtcttcaattctattccattggtctacttgtct
gtcactataccagtaccatgcagtttttatcacaattgctctgtagtaaa
actttaggtcaggcatggtgattccaccagagttttcttttatccttgag
atgagttttgctatcctaggttttttgtaattccagatgaatttgaagat
tgctctttctaattcattgaagaattgaggtgaaaatttgatgggggatt
gcattgaatctttgattgcttttggcaagattgcccttttttacatgttg
atcctgccaattcatgagcatggggagatctttccatcttctgagatctt
ctttattttctttcttctgagacttgtaagtttttatc
atcccatatgcagtcaccaaactccgacactactatggatgccaagaaat
gcttgctgacaggagcctggtatgttgtcttctgagaggcactgccttac
aaatagagaggtggatgctccaagccaaccattggactgagcatgggatc
cccaatggaggagttagagaaaggactgaaggagttgaaggggtttgcaa
ccccataggaagaacaacagtatcaaccaactagaccccccagagcttcc
agggactaagccatcaacctaagagtacacatggctccaactgcatatgt
agcagaggatggccttgtcaggcatcaatgggaggagagctccttcgtcc
aaaaaaaaaaaaaaaaaagcaatagatgccccagtgtaggggaatcaagt
gcagggggataggagtgagtgggtgggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_45387281_45387810
seq2: B6Ng01-019D13.b_412_933 (reverse)

seq1  GATAAAAACTT-CAAGTCCCTGAAGAAAGAAATTAAAGAAGATCTCAGAA  49
      ||||||||||| |||||| | ||||||||||| |||||||||||||||||
seq2  GATAAAAACTTACAAGTCTCAGAAGAAAGAAAATAAAGAAGATCTCAGAA  50

seq1  GATGGAAAGATCT-CCCATGCTCATGGATTGGCAGGACCAACATTGTAAA  98
      ||||||||||||| |||||||||||| |||||||||| ||||||   |||
seq2  GATGGAAAGATCTCCCCATGCTCATGAATTGGCAGGATCAACATGTAAAA  100

seq1  AATGGCTATCTTGCCAAAAGCAATCTACAGATTCAATGCAAT-CCCCATT  147
      || ||| |||||||||||||||||| | |||||||||||||| |||||| 
seq2  AAGGGCAATCTTGCCAAAAGCAATC-AAAGATTCAATGCAATCCCCCATC  149

seq1  AAAATTCCAACTCAATTCTTCAACGAACTAGAAGGAGCAATTTGCAAATT  197
      ||| || || ||||||||||||| ||| ||||| ||||||| | ||||||
seq2  AAATTTTCACCTCAATTCTTCAATGAATTAGAAAGAGCAATCTTCAAATT  199

seq1  CATCTGGAATAACAAAAAACCGAGGATAGCAAAAACTCTTCTCAAGGATA  247
      |||||||||| |||||||||| |||||||| ||||||| |||||||||||
seq2  CATCTGGAATTACAAAAAACCTAGGATAGC-AAAACTCATCTCAAGGATA  248

seq1  AAAG-AACTTCTGGTGGAATCACCATGCCTGACCTAAAGCTTTACTACAG  296
      |||| ||  |||||||||||||||||||||||||||||| ||||||||||
seq2  AAAGAAAACTCTGGTGGAATCACCATGCCTGACCTAAAGTTTTACTACAG  298

seq1  AGCAATTGTGATAAAAACTGCATGGTACTGGTATAGAGACAGACAAGTGG  346
      |||||||||||||||||||||||||||||||||||| ||||||||||| |
seq2  AGCAATTGTGATAAAAACTGCATGGTACTGGTATAGTGACAGACAAGTAG  348

seq1  ACCAATGGAATAGAATTGAAGACCCAGAAATGAACCCACACACCTATGGT  396
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  ACCAATGGAATAGAATTGAAGACCCAGAAATAAACCCACACACCTATGGT  398

seq1  CACTTGATCTTCGACAAGGGAGCCAAAACCATCCAGTGGAAGAAAGACAG  446
      |||||||||||||||||||| || ||||||||||||||||| ||||||||
seq2  CACTTGATCTTCGACAAGGGTGCTAAAACCATCCAGTGGAAAAAAGACAG  448

seq1  CATTTTCAACAATTGGTGCTGGCACAACTGGTTGTTATCATGTAGAAGAA  496
      |||||||||||| |||| |||||||||||||| |||||||||||||||| 
seq2  CATTTTCAACAAATGGTTCTGGCACAACTGGTAGTTATCATGTAGAAGA-  497

seq1  TGCGAATCGATCCATACTTATCTCCTTGTACTAA  530
               || ||| | || |||||||||||||
seq2  ---------ATTCATTCCTACCTCCTTGTACTAA  522