BAC Information

Click to search

BAC

Clone NameB6Ng01-019K02
Chromosome3 (Build37)
Map Location 46,487,166 - 46,488,272
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC433580, LOC671801, EG241989
Downstream geneLOC545517, LOC383849, LOC383850, LOC100039426
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-019K02.bB6Ng01-019K02.g
ACCDH852665DH852666
length1,097859
definitionDH852665|Mus musculus domesticus DNA, BAC clone: B6Ng01-019K02, 5' end.DH852666|Mus musculus domesticus DNA, BAC clone: B6Ng01-019K02, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaaaaaatctgctcaacttctgttctctgtagtcatccagacgga
gcttgtagatatagatggtcttggtagccatcttgcagtagggtctcctg
cttccaattatgccatggtgacattgcagacaccttcccacccatgtaca
tcagacaaataatgaggtgtaagagatttgatctcaagtgcctctgtatt
cacagcaagtgctttaaccactaagcaatctcctcattttggaattatta
cttcttacatgacaactaatatgaaatctcattccattcacacagcgacc
ttagactttcattcatctgacattgtcctttatctggagtgtatgacttt
attttttccataattggttagcagagaatttgactaagtaaaaattaaac
gcacacacacacacatacaaacacacacacacagaaagagagagagatgc
cttcatttaatttatttgaactatcatcgtccctaaactccttcttgaaa
acgaatgagagataatagtgcattcatgtaatatggtaaagtggtgcctt
gtttcacaaaaatcattggagaagataaacattttcctctttcagcatcc
cttttacaagtggctaactctcccttactagtgtgcacaatagagggttc
ttcccaagtcagattctcttgtagctcattcaattgcatggtaaagtttt
atttttatagattaagagcagctgtaatcaaataataattgtaataaaaa
aggcttaatgtagtcacatatttccgaaatcttctctatgtgttagattg
ggattagataacaggaaaattatatgttacctgagacaaaacatacaacc
ttagaaatttgatttttccttagtaggtacttatgtaacaagatggttat
gtattcctttatctggataatttagcccagtgcctggcacattttacaat
caaagcaattctttgatactaggtaaagtatataacacatatcagataaa
ttcaatctatatggaactgacagaatcaggtaaggcatgaatttattatc
aggactattttctccccagttatgatggcaaggagtagatgtgccca

gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ctcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
gtattgcaggcttgtacaaccactatggaaatcagtctggaggttcctca
gaaaactggatatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gggttttctttattgtgtctacttccccttttagttctagtatggttttg
ttcatttccatcacctgtttggatgtgttttcctgtttttctttaatgat
ttctacctgtttggctgtgttttcctgcttttctttaagggcctgtaact
ctttagcagtgctctcctgtaattctttaagtgacttatgaaagtccttc
ttgatgtcctctatcatcatcatgagaaatgtttttaaatctgggtctag
attttcggttgtgttggggtgcccaggactaggtgggggtgggagtgctg
cgttctgatgatggtgagtggtcttgatttctgttataggattcttatgt
tttgccttttcgccatctggtaatctctgaagctagctgttttagttgtc
actgttaagagcttgttctttcggtgactctgttatcttctatatacata
cctggagtgtttttattctccttagtttattggggcagagtatctctgca
ggcagcttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_46487166_46488272
seq2: B6Ng01-019K02.b_42_1138

seq1  GAATTCAAAAAATCTGCTCAACTTCTGTTCTCTGTAGTCATCCAGACGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAAAAATCTGCTCAACTTCTGTTCTCTGTAGTCATCCAGACGGA  50

seq1  GCTTGTAGATATAGATGGTCTTGGTAGCCATCTTGCAGTAGGGTCTCCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGTAGATATAGATGGTCTTGGTAGCCATCTTGCAGTAGGGTCTCCTG  100

seq1  CTTCCAATTATGCCATGGTGACATTGCAGACACCTTCCCACCCATGTACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCAATTATGCCATGGTGACATTGCAGACACCTTCCCACCCATGTACA  150

seq1  TCAGACAAATAATGAGGTGTAAGAGATTTGATCTCAAGTGCCTCTGTATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGACAAATAATGAGGTGTAAGAGATTTGATCTCAAGTGCCTCTGTATT  200

seq1  CACAGCAAGTGCTTTAACCACTAAGCAATCTCCTCATTTTGGAATTATTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGCAAGTGCTTTAACCACTAAGCAATCTCCTCATTTTGGAATTATTA  250

seq1  CTTCTTACATGACAACTAATATGAAATCTCATTCCATTCACACAGCGACC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTACATGACAACTAATATGAAATCTCATTCCATTCACACAGCGACC  300

seq1  TTAGACTTTCATTCATCTGACATTGTCCTTTATCTGGAGTGTATGACTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGACTTTCATTCATCTGACATTGTCCTTTATCTGGAGTGTATGACTTT  350

seq1  ATTTTTTCCATAATTGGTTAGCAGAGAATTTGACTAAGTAAAAATTAAAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTTCCATAATTGGTTAGCAGAGAATTTGACTAAGTAAAAATTAAAC  400

seq1  GCACACACACACACATACAAACACACACACACAGAAAGAGAGAGAGATGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACACACACACACATACAAACACACACACACAGAAAGAGAGAGAGATGC  450

seq1  CTTCATTTAATTTATTTGAACTATCATCGTCCCTAAACTCCTTCTTGAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCATTTAATTTATTTGAACTATCATCGTCCCTAAACTCCTTCTTGAAA  500

seq1  ACGAATGAGAGATAATAGTGCATTCATGTAATATGGTAAAGTGGTGCCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGAATGAGAGATAATAGTGCATTCATGTAATATGGTAAAGTGGTGCCTT  550

seq1  GTTTCACAAAAATCATTGGAGAAGATAAACATTTTCCTCTTTCAGCATCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCACAAAAATCATTGGAGAAGATAAACATTTTCCTCTTTCAGCATCC  600

seq1  CTTTTACAAGTGGCTAACTCTCCCTTACTAGTGTGCACAATAGAGGGTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTACAAGTGGCTAACTCTCCCTTACTAGTGTGCACAATAGAGGGTTC  650

seq1  TTCCCAAGTCAGATTCTCTTGTAGCTCATTCAATTGCATGGTAAAGTTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCAAGTCAGATTCTCTTGTAGCTCATTCAATTGCATGGTAAAGTTTT  700

seq1  ATTTTTATAGATTAAGAGCAGCTGTAATCAAATAATAATTGTAATAAAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTATAGATTAAGAGCAGCTGTAATCAAATAATAATTGTAATAAAAA  750

seq1  AGGCTTAATGTAGTCACATATTTCCGAAATCTTCTCTATGTGTTAGATTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTTAATGTAGTCACATATTTCCGAAATCTTCTCTATGTGTTAGATTG  800

seq1  GGATTAGATAACAGGAAAATTATATGTTACCTGAGACAAAACATACAACC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTAGATAACAGGAAAATTATATGTTACCTGAGACAAAACATACAACC  850

seq1  TTAGAAATTTGATTTTACCTTAGTAGGTACTTATGTAACAAGATGGTTAT  900
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  TTAGAAATTTGATTTTTCCTTAGTAGGTACTTATGTAACAAGATGGTTAT  900

seq1  GTATTCCTTTATCTGGATAATTTTAGCCCAGTGCCTGGCACATTTTACAA  950
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  GTATTCCTTTATCTGGATAA-TTTAGCCCAGTGCCTGGCACATTTTACAA  949

seq1  TCAAAGCAAATTCTTTGATAACTAGGTAAAAGTAATATAACACAATATCA  1000
      ||||||| ||||||||||| ||||||| ||||| ||||||||| ||||||
seq2  TCAAAGC-AATTCTTTGAT-ACTAGGT-AAAGT-ATATAACAC-ATATCA  994

seq1  GAATAAATTCAATCTAATATGAAACTGAACAGAATCAAGTAAAGCATGAA  1050
      | ||||||||||||| ||||| ||||| ||||||||| |||| ||||| |
seq2  G-ATAAATTCAATCT-ATATGGAACTG-ACAGAATCAGGTAAGGCATG-A  1040

seq1  ATATATTAATCAGGACTA-TTTCTCTCAGTTTATGAT-GCAAAGAGTTAG  1098
      || |||| |||||||||| |||||| |   ||||||| |||| ||| |||
seq2  ATTTATT-ATCAGGACTATTTTCTCCCCAGTTATGATGGCAAGGAG-TAG  1088

seq1  ATGTGCCCA  1107
      |||||||||
seq2  ATGTGCCCA  1097


| Home | SequenceCutter | Blast | Download |