BAC Information

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BAC

Clone NameB6Ng01-020G22
Chromosome3 (Build37)
Map Location 21,536,525 - 21,537,637
singlet/doubletsinglet
Overlap genenone
Upstream geneEG665094, LOC100040325
Downstream gene7530428D23Rik, LOC100039465, LOC100040353, Tbl1xr1, LOC545506, LOC675593
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-020G22.bB6Ng01-020G22.g
ACCDH853232DH853233
length1,0991,017
definitionDH853232|Mus musculus domesticus DNA, BAC clone: B6Ng01-020G22, 5' end.DH853233|Mus musculus domesticus DNA, BAC clone: B6Ng01-020G22, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccagtgagcagccataaattgacaaaataaataccatgcccactt
agactcataaaaaaacttaaagcttttgttctgtttttttgcaaatagat
aggaaatttgaaaaagaaaggaagagagaaagaaggaagttgtacttcca
caatgacatcgccccacattccttcagacaggtaggcctgcagggacaag
tatatgaaaggaggcgggacgtggagtgcaggaagcagcagtgtagaaac
agttccaggaacagaggaataaaaaggcactaagttagagggtagggtgt
acagtcttcctgaaaggcgtgggaagagaagccagccttaccataaggaa
agcaaagctggaactttaattccatactggatctttagccagttgttcta
acaacaggaccctccaaagttatatgtttgtctgtgtgaccaaagcttag
cctcaacctcaaggatcactccacatgtgacatttgtcatgtttcttgaa
gccagggtctctcatttggtcaaggacccatcaattcagtccggggagac
atgtccgcctctgcctccaggtgctgagatgacaaacatgctgctgaaca
agactttctcatataggttctgaggaccaagctcaaatcatcatgcttac
aggacaagctctttaccctagagccatctccctggcccataaagtttgat
tgcaaaataacacaatttaatagaggtgaaggatgctcagatgctatttg
ctactggggtacaaactcaaacatactcttaggtcaggcaggccagagtt
caggaaagtaacgtgaggtcatctagttagttctgccctcatccagttgg
gccttatctcccaagtctaaccaatcatttttattggaagatatacactt
ctagtttttcaacaggagctgaaaagctggatttagagcacccccaaatt
tgaatgtaccaagggcaaacgcattcttaggataatatgtagagaggcaa
catgaaataggaaaagttaaagctgtcaccaggcccctttatttataatc
cttcaacaattaaaaaaaaaaaaaagaacctgtttacctgcagtggaga
gaattctttgtttagctctgagctccattttttaatggggttatttgatt
tttctggagtccaccttcttgagttctttatatatattggatattagtcc
cctatctgagaatctttttcaaaaggggaaacaaagtaggtaacagaaat
caatggaataagagaactgggtggaagaggggatcttaagcagagaaggg
caggggtagggctggaaatcatatgtagtgagaacagaggagaaacgagg
gagatcatagggcgggggcaggctgtgcaatctctaggacttgccagaga
cctgggatagggagaggtcccagacagtctatggaggctactacagctga
gattcttagcagtggggaagatagatcctgaaatggccacttcctgtagc
taagcaggacaaccagtggaaggataagggcggcaaccacccacaaagcc
tttgacccaaaatgtgtcctgcctagaggatgtgcaaggacaaagacaga
gtagaaactgagggaatggccagtcaatgactgccgtaaattgaaaccca
tcccatgggcaagaatcaatccatgacacttttactgatactttttcgtg
cttgcagacaggaacatgttgggagaaagattgaaggacctgaagaggtc
tgggagtccacaggaagagtcaactcacctggactgttgggggctcccag
agaatgggctggacctaggccccatgcacatatgaagcagataaacagct
tggtcttcatatgggtccccaaacaattggagcaggggttgtcctgaacc
tgtttcctgccttcctctgtatcccatgcccctaggtggacagccttgtc
tggcctcattgggagaggatgtgcctagtcttctgggacttgatacatgg
gggggagacaggctgacaccagaaaggggcttactctcccaaagagatgg
ggaagttgatgggaggagtccgatttgagaactgtgtatacaagtatatt
atatatatttcttataa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_21536525_21537637
seq2: B6Ng01-020G22.b_38_1136

seq1  GAATTCCAGTGAGCAGCCATAAATTGACAAAATAAATACCATGCCCACTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGTGAGCAGCCATAAATTGACAAAATAAATACCATGCCCACTT  50

seq1  AGACTCATAAAAAAACTTAAAGCTTTTGTTCTGTTTTTTTGCAAATAGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTCATAAAAAAACTTAAAGCTTTTGTTCTGTTTTTTTGCAAATAGAT  100

seq1  AGGAAATTTGAAAAAGAAAGGAAGAGAGAAAGAAGGAAGTTGTACTTCCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAATTTGAAAAAGAAAGGAAGAGAGAAAGAAGGAAGTTGTACTTCCA  150

seq1  CAATGACATCGCCCCACATTCCTTCAGACAGGTAGGCCTGCAGGGACAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGACATCGCCCCACATTCCTTCAGACAGGTAGGCCTGCAGGGACAAG  200

seq1  TATATGAAAGGAGGCGGGACGTGGAGTGCAGGAAGCAGCAGTGTAGAAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATGAAAGGAGGCGGGACGTGGAGTGCAGGAAGCAGCAGTGTAGAAAC  250

seq1  AGTTCCAGGAACAGAGGAATAAAAAGGCACTAAGTTAGAGGGTAGGGTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCCAGGAACAGAGGAATAAAAAGGCACTAAGTTAGAGGGTAGGGTGT  300

seq1  ACAGTCTTCCTGAAAGGCGTGGGAAGAGAAGCCAGCCTTACCATAAGGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTCTTCCTGAAAGGCGTGGGAAGAGAAGCCAGCCTTACCATAAGGAA  350

seq1  AGCAAAGCTGGAACTTTAATTCCATACTGGATCTTTAGCCAGTTGTTCTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAAGCTGGAACTTTAATTCCATACTGGATCTTTAGCCAGTTGTTCTA  400

seq1  ACAACAGGACCCTCCAAAGTTATATGTTTGTCTGTGTGACCAAAGCTTAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACAGGACCCTCCAAAGTTATATGTTTGTCTGTGTGACCAAAGCTTAG  450

seq1  CCTCAACCTCAAGGATCACTCCACATGTGACATTTGTCATGTTTCTTGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAACCTCAAGGATCACTCCACATGTGACATTTGTCATGTTTCTTGAA  500

seq1  GCCAGGGTCTCTCATTTGGTCAAGGACCCATCAATTCAGTCCGGGGAGAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGGGTCTCTCATTTGGTCAAGGACCCATCAATTCAGTCCGGGGAGAC  550

seq1  ATGTCCGCCTCTGCCTCCAGGTGCTGAGATGACAAACATGCTGCTGAACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCCGCCTCTGCCTCCAGGTGCTGAGATGACAAACATGCTGCTGAACA  600

seq1  AGACTTTCTCATATAGGTTCTGAGGACCAAGCTCAAATCATCATGCTTAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTTTCTCATATAGGTTCTGAGGACCAAGCTCAAATCATCATGCTTAC  650

seq1  AGGACAAGCTCTTTACCCTAGAGCCATCTCCCTGGCCCAGAAAGTTTGAT  700
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  AGGACAAGCTCTTTACCCTAGAGCCATCTCCCTGGCCCATAAAGTTTGAT  700

seq1  TGCAAAATAACACAATTTAATAGAGGTGAAGGATGCTCAGATGCTATTTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAAATAACACAATTTAATAGAGGTGAAGGATGCTCAGATGCTATTTG  750

seq1  CTACTGGGGTACAAACTCAAACATACTCTTAGGTCAGGCAGGCCAGAGTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTGGGGTACAAACTCAAACATACTCTTAGGTCAGGCAGGCCAGAGTT  800

seq1  CAGGAAAGTAACGTGAGGTCATCTAGTTAGTTCTGCCCTCATCCAGTTGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAAAGTAACGTGAGGTCATCTAGTTAGTTCTGCCCTCATCCAGTTGG  850

seq1  GCCTTATCTCCCAAGTCTAACCAATCATTTTTATTGGAAGATATACACTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTATCTCCCAAGTCTAACCAATCATTTTTATTGGAAGATATACACTT  900

seq1  CTAGTTTTTTCAACAGGAGCTGAAAAGCTGGATTTAGAGCAACCCCCAAA  950
      |||| ||||||||||||||||||||||||||||||||||| |||||||||
seq2  CTAG-TTTTTCAACAGGAGCTGAAAAGCTGGATTTAGAGC-ACCCCCAAA  948

seq1  TTTGAAATGTTACCAAGGGCAAACGCATTCTTTAAGGATAATATTGTAGA  1000
      |||| |||| ||||||||||||||||||||||  ||||||||| ||||||
seq2  TTTG-AATG-TACCAAGGGCAAACGCATTCTT--AGGATAATA-TGTAGA  993

seq1  GAGGCCACATGAAATAGGAAAAGTTATAGCTGTCACCACAGCCCCTTTAA  1050
      ||||| |||||||||||||||||||| |||||||||||  |||||||| |
seq2  GAGGCAACATGAAATAGGAAAAGTTAAAGCTGTCACCA-GGCCCCTTT-A  1041

seq1  TTTATATACCTTCAACACATTAAAAAAAAAAAAAAAGAACCTGTTTAACC  1100
      ||||||  ||||||||| ||| |||||||||||||||||||||||| |||
seq2  TTTATAATCCTTCAACA-ATT-AAAAAAAAAAAAAAGAACCTGTTT-ACC  1088

seq1  TGTCAGTGAGAGA  1113
      || ||||| ||||
seq2  TG-CAGTG-GAGA  1099