BAC Information

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BAC

Clone NameB6Ng01-021J20
Chromosome3 (Build37)
Map Location 74,936,284 - 75,051,873
singlet/doubletdoublet
Overlap geneBC050789, Serpini2
Upstream geneLOC619764, LOC667434, LOC100041551, EG667459
Downstream geneWdr49, Pdcd10, Serpini1, Golph4, Fstl5
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-021J20.bB6Ng01-021J20.g
ACCDH854068DH854069
length8301,133
definitionDH854068|Mus musculus domesticus DNA, BAC clone: B6Ng01-021J20, 5' end.DH854069|Mus musculus domesticus DNA, BAC clone: B6Ng01-021J20, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(74,936,284 - 74,936,900)(75,050,714 - 75,051,873)
sequence
gaattctttgttcagttctgagccccattttttaatggggttgtttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctaaattcatctggaataacaaaaaacctaggatagcaaaaactcttctc
aaggataaaagaacctctggtggaatcaccatgccggacctaaagcttta
ctacagagcaattgtggtaaaaactgcatggtactggtatagagacagac
aagtagaccaatggaatagaattgaagacccagaaatgaacccacacacc
tatggtcacttgatcttcgacaagggagctaaaaccatccagtggaagaa
agacagcattttcaacaaatggtgctggcacaactggttgttatcatgta
gaagaatgcgaatcgatccatacttatctccttgtactaaggtcaaatct
aaatggatcaaagaacttcacataaaaccagagacactgaaacttataga
ggagaaagtggggaaaagccttgaagatatttggcacaggggaaaaattc
ctgaacagaacagcaatggctttgtgctgtaagatcgagaattgacaaat
gggacctaatgaaactccaaagtttctgcaaggcaaaagacaccgtcaat
aagacaaagagaccaccaacagattgggatatgatctttaccttgctttt
tattttgtaggggacatttttttaaagtaatactacatagcacttttaca
aatgcatgtaacgactgaatcacaagatgagtgatccttagaccattgat
taatgtggttaaaagtatcaaatttgatat
gaattctcttcagtttctgaacaattctctaattatattagtggaggaaa
agccccagagatgtacagtcacttgcctggggtcatgctgttaattgact
gaatttgaactgatatcaggttccctggttttaagctcaaagccatttgg
cttttgtacactgtctttcattgtatgctagaattctccatctcattagg
agatgataataggagtcagcagatatcccgacgaatcatgcccccagaat
agcctgagaacctgactttgaaggatgtgctctggggttgttcaagaaca
aggggaacaaaaaaaatattcactgaaagtggaaatggaagtaaaattga
atttccttttttgattttctcagtagcttagatgtgaacttttatccact
ggtgctttctatggaattgtcatgattattctctatagaagaagagtatc
attcatgtcattttcgtaagattatattttactatttcactgtttttcat
tttatatatatatataaaattttccatgggtctgaactaaattttacagg
accattgagactaagattcagtttactgtgagacaagaaataagattcag
tttactgtgagacaagaaatgcactatggggactggaagggcatcacatc
aaaactacacagaaattgccattctcaggtcttactctgatccactgagt
cagaactaagttgaagagaacctgagataggtgtaaaaaatgcttaatct
ataaaacactgtctgaccactgaaatatcccacatcatggacaaactcta
cataagctgaaatatttcagctcatcataataaataattgtaagaaacaa
atatcttggtctttgtttataattaaaatttcatatatatatattaatcc
ttctaggatcacagaataatttcttgcatgtagatacaaaataagtaatc
agtagttttaaactcagatgaggattctcacagcctgcagtagagcaatg
aagggcatcatgtctggatagaattaaaagtggagcatttagaacgatca
tgtatgtaagatggacggaattactatgagataggagtttcatgctttca
attgaattctatttgggtcttcccctgaacata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_74936284_74936900
seq2: B6Ng01-021J20.b_256_873

seq1  TGTGGTAAAAACTGCATGGTACTGGTATAGAGACAGACAAGTAGACCAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGTAAAAACTGCATGGTACTGGTATAGAGACAGACAAGTAGACCAAT  50

seq1  GGAATAGAATTGAAGACCCAGAAATGAACCCACACACCTATGGTCACTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATAGAATTGAAGACCCAGAAATGAACCCACACACCTATGGTCACTTG  100

seq1  ATCTTCGACAAGGGAGCTAAAACCATCCAGTGGAAGAAAGACAGCATTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTCGACAAGGGAGCTAAAACCATCCAGTGGAAGAAAGACAGCATTTT  150

seq1  CAACAAATGGTGCTGGCACAACTGGTTGTTATCATGTAGAAGAATGCGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAAATGGTGCTGGCACAACTGGTTGTTATCATGTAGAAGAATGCGAA  200

seq1  TCGATCCATACTTATCTCCTTGTACTAAGGTCAAATCTAAATGGATCAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGATCCATACTTATCTCCTTGTACTAAGGTCAAATCTAAATGGATCAAA  250

seq1  GAACTTCACATAAAACCAGAGACACTGAAACTTATAGAGGAGAAAGTGGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTTCACATAAAACCAGAGACACTGAAACTTATAGAGGAGAAAGTGGG  300

seq1  GAAAAGCCTTGAAGATA-TTGGCACAGGGGAAAAATTCCTGAACAGAACA  349
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  GAAAAGCCTTGAAGATATTTGGCACAGGGGAAAAATTCCTGAACAGAACA  350

seq1  GCAATGGC-TTGTGCTGTAAGATCGAGAATTGACAAATGGGACCTAATGA  398
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  GCAATGGCTTTGTGCTGTAAGATCGAGAATTGACAAATGGGACCTAATGA  400

seq1  AACTCCAAAGTTTCTGCAAGGCAAAAGACACCGTCAATAAGACAAAGAGA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCCAAAGTTTCTGCAAGGCAAAAGACACCGTCAATAAGACAAAGAGA  450

seq1  CCACCAACAGATTGGGAAAGGATCTTTACCTTGCTTTTAGTATTGTA-GG  497
      ||||||||||||||||| | ||||||||||||||||||  | ||||| ||
seq2  CCACCAACAGATTGGGATATGATCTTTACCTTGCTTTTTATTTTGTAGGG  500

seq1  GACATTTTTTTAAAGTAATACTACATAGCAC-TTTACAAATGCATGTAAC  546
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  GACATTTTTTTAAAGTAATACTACATAGCACTTTTACAAATGCATGTAAC  550

seq1  GACTGAATCACAAGATGAGTTGATCCATAGACCAATGATTAATGTGGTTT  596
      ||||||||||||||||||| |||||| ||||||| |||||||||||| ||
seq2  GACTGAATCACAAGATGAG-TGATCCTTAGACCATTGATTAATGTGG-TT  598

seq1  AAAAGTATCAAATTTGCATAT  617
      |||||||||||||||| ||||
seq2  AAAAGTATCAAATTTG-ATAT  618

seq1: chr3_75050714_75051873
seq2: B6Ng01-021J20.g_69_1201 (reverse)

seq1  TATGTTCAGTGAGGAAGAACACCAAATAGTAGATTCAATTTAGTAAAAGC  50
      ||||||||  | ||||||   ||||||||   |||||||    | |||||
seq2  TATGTTCA--GGGGAAGA--CCCAAATAG--AATTCAAT----TGAAAGC  40

seq1  AATGAAAAACGTCCTATTCTCAATAGTAATTTCCTGTCCACTCTTTACAT  100
       ||||||    ||||| |||| |||||||||  | ||||| || ||||| 
seq2  -ATGAAA---CTCCTA-TCTC-ATAGTAATT--CCGTCCA-TC-TTACA-  79

seq1  TACATGATCTGTTCTTAAAATGCTTCACTTTTTAATTCTATTCCAGACAT  150
      ||||||||| |||||  ||||||| ||| ||||||||||| |||||||||
seq2  TACATGATC-GTTCT--AAATGCTCCAC-TTTTAATTCTA-TCCAGACAT  124

seq1  GATTGCCCTTCATTGCTCTACTGCAGGCTGTGAGAAT-CTCTTCTGAGTT  199
      || |||||||||||||||||||||||||||||||||| ||| ||||||||
seq2  GA-TGCCCTTCATTGCTCTACTGCAGGCTGTGAGAATCCTCATCTGAGTT  173

seq1  TAAAACTACTGATTACTTATTTTGTATCTACATTGCAAG-AATTATTCTG  248
      |||||||||||||||||||||||||||||||| |||||| ||||||||||
seq2  TAAAACTACTGATTACTTATTTTGTATCTACA-TGCAAGAAATTATTCTG  222

seq1  TGATCCTAGAGGATTTAATATATATATATGGAATTTTTATTATAAAACAA  298
      |||||||||| |  |||||||||||||||| |||||| ||||| ||||||
seq2  TGATCCTAGAAGGATTAATATATATATATGAAATTTTAATTAT-AAACAA  271

seq1  GGACC-AGATATTTGTTTTCTTACAATTATTTATTATGATGAGCTGAAAT  347
       |||| ||||||||| ||||||||||||||||||||||||||||||||||
seq2  AGACCAAGATATTTG-TTTCTTACAATTATTTATTATGATGAGCTGAAAT  320

seq1  ATTTCAGCTTATGTAGAGTTTGTCCATGATGTGGGATATTTCAGTGGTCA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCAGCTTATGTAGAGTTTGTCCATGATGTGGGATATTTCAGTGGTCA  370

seq1  GACAGTGTTTTATAGATTAAGCATTTTTTACACCTATCTCAGGTTCTCTT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGTGTTTTATAGATTAAGCATTTTTTACACCTATCTCAGGTTCTCTT  420

seq1  CAACTTAGTTCTGACTCAGTGGATCAGAGTAAGACCTGAGAATGGCAATT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTTAGTTCTGACTCAGTGGATCAGAGTAAGACCTGAGAATGGCAATT  470

seq1  TCTGTGTAGTTTTGATGTGATGCCCTTCCAGTCCCCATAGTGCATTTCTT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTGTAGTTTTGATGTGATGCCCTTCCAGTCCCCATAGTGCATTTCTT  520

seq1  GTCTCACAGTAAACTGAATCTTATTTCTTGTCTCACAGTAAACTGAATCT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCACAGTAAACTGAATCTTATTTCTTGTCTCACAGTAAACTGAATCT  570

seq1  TAGTCTCAATGGTCCTGTAAAATTTAGTTCAGACCCATGGAAAATTTTAT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCTCAATGGTCCTGTAAAATTTAGTTCAGACCCATGGAAAATTTTAT  620

seq1  ATATATATATAAAATGAAAAACAGTGAAATAGTAAAATATAATCTTACGA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATATATAAAATGAAAAACAGTGAAATAGTAAAATATAATCTTACGA  670

seq1  AAATGACATGAATGATACTCTTCTTCTATAGAGAATAATCATGACAATTC  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGACATGAATGATACTCTTCTTCTATAGAGAATAATCATGACAATTC  720

seq1  CATAGAAAGCACCAGTGGATAAAAGTTCACATCTAAGCTACTGAGAAAAT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGAAAGCACCAGTGGATAAAAGTTCACATCTAAGCTACTGAGAAAAT  770

seq1  CAAAAAAGGAAATTCAATTTTACTTCCATTTCCACTTTCAGTGAATATTT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAAAGGAAATTCAATTTTACTTCCATTTCCACTTTCAGTGAATATTT  820

seq1  TTTTTGTTCCCCTTGTTCTTGAACAACCCCAGAGCACATCCTTCAAAGTC  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGTTCCCCTTGTTCTTGAACAACCCCAGAGCACATCCTTCAAAGTC  870

seq1  AGGTTCTCAGGCTATTCTGGGGGCATGATTCGTCGGGATATCTGCTGACT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTCTCAGGCTATTCTGGGGGCATGATTCGTCGGGATATCTGCTGACT  920

seq1  CCTATTATCATCTCCTAATGAGATGGAGAATTCTAGCATACAATGAAAGA  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATTATCATCTCCTAATGAGATGGAGAATTCTAGCATACAATGAAAGA  970

seq1  CAGTGTACAAAAGCCAAATGGCTTTGAGCTTAAAACCAGGGAACCTGATA  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGTACAAAAGCCAAATGGCTTTGAGCTTAAAACCAGGGAACCTGATA  1020

seq1  TCAGTTCAAATTCAGTCAATTAACAGCATGACCCCAGGCAAGTGACTGTA  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTTCAAATTCAGTCAATTAACAGCATGACCCCAGGCAAGTGACTGTA  1070

seq1  CATCTCTGGGGCTTTTCCTCCACTAATATAATTAGAGAATTGTTCAGAAA  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTCTGGGGCTTTTCCTCCACTAATATAATTAGAGAATTGTTCAGAAA  1120

seq1  CTGAAGAGAATTC  1160
      |||||||||||||
seq2  CTGAAGAGAATTC  1133