BAC Information

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BAC

Clone NameB6Ng01-021P02
Chromosome3 (Build37)
Map Location 77,804,932 - 77,806,053
singlet/doubletsinglet
Overlap genenone
Upstream geneDnmt3a-ps1
Downstream geneEG626461, LOC667526, LOC626479, LOC100041691, LOC383883, LOC100041748, LOC100041716, LOC100041725, LOC100041766
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-021P02.bB6Ng01-021P02.g
ACCDH854314DH854315
length1,1091,220
definitionDH854314|Mus musculus domesticus DNA, BAC clone: B6Ng01-021P02, 5' end.DH854315|Mus musculus domesticus DNA, BAC clone: B6Ng01-021P02, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttcctctcctcttcttgcatcttgtctccttgcctctagggaca
tggaagtccttcctgttctttctaaccagcaattggcccatggctttttt
actgacagatcaagagccaattggggaacaatactgtagcatcagaacca
ctcctaccgaccattactaatccccatgaccccaaatagtcactgattca
ctatgtcttccttactgtcccaagtctatgtcatagtattttccttcaca
ttatttccacttcccactctccctccagctcctcctcctcctcctcttcc
tccttctctttttcctttttttcttcttcttccacccctctcacatcatg
cataaccagtactgttcacatactctttaatgcctggtcttctactgaat
tctttttttttaacatgtatttatttatttatttatttatttatttattt
atttatttatttaatgtatgtgaatacactgtcactctcttcagacacac
tagaagaaggcatcagatacctttacagataggtgtgagccaccatgtgg
ttgcttggaattgaactcaggacctcttgaagagctagcagtgctcttaa
acaaacaagtagacaaaagattaatggaaaaattgagaagtcttagatga
tcaatgatagtggaatttcaggttaaagctagaacttgcctgttggttta
agattttaaaaattgagaaaagagtatctcctgaggaaattgcagactga
cacctaaaggtgtgaatttcatagacatatgtaaaggtggggatatcagg
cctgtacaagcaattatcccaaagatcacagtgtgaactgcacatccctg
tgctgcataccatacaaggtcaatgtatagctgctttccacacttgactc
atattttattatcttaggtagcaaattagaaatgctactttggacttaat
ttattgtgccttacattttataaaagatagtttctactatttagaacaca
aataatgacctttagtttcaagagtatcattacactagatcagaactagg
agcttcaatgccacatcatatctgaaaatttctgctgatagagttttttt
ttccactgg
gaattccaagctcagggttggcttcaaggattttctaggaatcattggaa
cactggtggaggcttagctatatgtcaaaaatcaatccttaaaggcactc
ataataaaacaatactgaaagagagcacatggatccaaacaccagactaa
cagggggacaggttttgagtatatgggctatgggaatgccaaggttccag
gaggctgtttctgtcaaactctttgcctcatgactgctaccaagcatact
gcactggagtggtcgtagcattctcctcctttcttttattatttttcagc
tgaagttccagaatgtcccactttgtcatagctacaaatctcagaactct
aaagatgagtggaaacacaatgattactgataaaataatgccaataataa
taggaagtaggtttatatattgaacccaatccaaggggttcaatgcactt
aggttattttttaaatctctggccaattcatcaatgttccaagtgtccaa
atgacttctgataatatctgaaatttctgcctttctagcgttaatatttg
ctatatcctgccctattgctaaaactacttcttctaaaacactaaccttt
gcttctaattttttatctataatgtgcagctctgacaaagctacagaaat
atttctatgcatatcattaacaaaatgagcagtatgtagctgctgaacta
aagttgtggtagataatgtaaaagaagttaaaattgcaattaaagcagta
attcctaaaatcagagctgtaacaaatctctttggtctttaagctcagtt
aaacttttcaaaatttgcattcccgaattctcaaaccaggatcatctcct
aactctacaggtagtaaatataagcaggtctctttaacaaaatcataaca
gcagattccttacctaaattagggtctacacaatagttaattgacagaat
tacatgatttgaaagacttgccaaactggtgatctactctatcaaatttc
caaatatgggtaagttacacagctttccagctttagggagtggcctccag
ttttggtttctaaagatcatgttagcacgagcaagaatgcctaccattcg
tgaaagcaagtatatctgctcgtctcgattcgttccctcacttgagacct
ggaagtttactgaatagatggtccactcctgatgcaaggtttgcatctaa
agagatctggcatatacgac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_77804932_77806053
seq2: B6Ng01-021P02.b_44_1152

seq1  GAATTCTTCCTCTCCTCTTCTTGCATCTTGTCTCCTTGCCTCTAGGGACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCCTCTCCTCTTCTTGCATCTTGTCTCCTTGCCTCTAGGGACA  50

seq1  TGGAAGTCCTTCCTGTTCTTTCTAACCAGCAATTGGCCCATGGCTTTTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAGTCCTTCCTGTTCTTTCTAACCAGCAATTGGCCCATGGCTTTTTT  100

seq1  ACTGACAGATCAAGAGCCAATTGGGGAACAATACTGTAGCATCAGAACCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGACAGATCAAGAGCCAATTGGGGAACAATACTGTAGCATCAGAACCA  150

seq1  CTCCTACCGACCATTACTAATCCCCATGACCCCAAATAGTCACTGATTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTACCGACCATTACTAATCCCCATGACCCCAAATAGTCACTGATTCA  200

seq1  CTATGTCTTCCTTACTGTCCCAAGTCTATGTCATAGTATTTTCCTTCACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGTCTTCCTTACTGTCCCAAGTCTATGTCATAGTATTTTCCTTCACA  250

seq1  TTATTTCCACTTCCCACTCTCCCTCCAGCTCCTCCTCCTCCTCCTCTTCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTCCACTTCCCACTCTCCCTCCAGCTCCTCCTCCTCCTCCTCTTCC  300

seq1  TCCTTCTCTTTTTCCTTTTTTTCTTCTTCTTCCACCCCTCTCACATCATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTCTCTTTTTCCTTTTTTTCTTCTTCTTCCACCCCTCTCACATCATG  350

seq1  CATAACCAGTACTGTTCACATACTCTTTAATGCCTGGTCTTCTACTGAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAACCAGTACTGTTCACATACTCTTTAATGCCTGGTCTTCTACTGAAT  400

seq1  TCTTTTTTTTTAACATGTATTTATTTATTTATTTATTTATTTATTTATTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTTTTTTAACATGTATTTATTTATTTATTTATTTATTTATTTATTT  450

seq1  ATTTATTTATTTAATGTATGTGAATACACTGTCACTCTCTTCAGACACAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATTTATTTAATGTATGTGAATACACTGTCACTCTCTTCAGACACAC  500

seq1  TAGAAGAAGGCATCAGATACCTTTACAGATAGGTGTGAGCCACCATGTGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAGAAGGCATCAGATACCTTTACAGATAGGTGTGAGCCACCATGTGG  550

seq1  TTGCTTGGAATTGAACTCAGGACCTCTTGAAGAGCTAGCAGTGCTCTTAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTTGGAATTGAACTCAGGACCTCTTGAAGAGCTAGCAGTGCTCTTAA  600

seq1  ACAAACAAGTAGACAAAAGATTAATGGAAAAATTGAGAAGTCTTAGATGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAACAAGTAGACAAAAGATTAATGGAAAAATTGAGAAGTCTTAGATGA  650

seq1  TCAATGATAGTGGAATTTCAGGTTAAAGCTAGAACTTGCCTGTTGGTTTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATGATAGTGGAATTTCAGGTTAAAGCTAGAACTTGCCTGTTGGTTTA  700

seq1  AGATTTTAAAAATTGAGAAAAGAGTATCTCCTGAGGAAATTGCAGACTGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTTTAAAAATTGAGAAAAGAGTATCTCCTGAGGAAATTGCAGACTGA  750

seq1  CACCTAAAGGTGTGAATTTCATAGACATATGTAAAGGTGGGGATATCAGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTAAAGGTGTGAATTTCATAGACATATGTAAAGGTGGGGATATCAGG  800

seq1  CCTGTACAAGCAATTATCCCAAAGATCACAGTGTGAACTGCACATCCCTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTACAAGCAATTATCCCAAAGATCACAGTGTGAACTGCACATCCCTG  850

seq1  TGCTGCATACCATACAAGGTCAATGTATAGCTGCTTTCCACACTTGACTC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGCATACCATACAAGGTCAATGTATAGCTGCTTTCCACACTTGACTC  900

seq1  ATATTTTATTATCTTAGGTAGCAAATTAGAAATGCTACTTTGGACTTAAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTTATTATCTTAGGTAGCAAATTAGAAATGCTACTTTGGACTTAAT  950

seq1  TTATTGTGCCTTACATTTTATAAAAGATAGTTTCTACTATTTAGAACACA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTGTGCCTTACATTTTATAAAAGATAGTTTCTACTATTTAGAACACA  1000

seq1  AATAATGACCTTTAGTTTCACAGAGTATCAATTACAACTAGATCAGGAAC  1050
      |||||||||||||||||||| |||||||| ||||| ||||||||| ||||
seq2  AATAATGACCTTTAGTTTCA-AGAGTATC-ATTAC-ACTAGATCA-GAAC  1046

seq1  TACAGAGCTTTCAAAATGCCACATTCATATCTTAGAAATTTCTGCTGATA  1100
      ||  ||||||    ||||||||| |||||||| | |||||||||||||||
seq2  TA-GGAGCTT---CAATGCCACA-TCATATCTGA-AAATTTCTGCTGATA  1090

seq1  GTAGTTTCTTTTTTTCCACTGG  1122
      | ||||  ||||||||||||||
seq2  G-AGTT--TTTTTTTCCACTGG  1109