BAC Information

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BAC

Clone NameB6Ng01-022A02
Chromosome3 (Build37)
Map Location 77,717,430 - 77,718,474
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100041635, Dnmt3a-ps1
Downstream geneEG626461, LOC667526, LOC626479, LOC100041691, LOC383883
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-022A02.bB6Ng01-022A02.g
ACCDH854353DH854354
length7761,038
definitionDH854353|Mus musculus domesticus DNA, BAC clone: B6Ng01-022A02, 5' end.DH854354|Mus musculus domesticus DNA, BAC clone: B6Ng01-022A02, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaagaagttagactctggagaatcaaataaccctattaaaaatgg
ggtacagagctaaacaaagaattctcaactcaggaatacttaatagttga
gaaacacctaaagaaatgttcaacacccttaatcatcagggaaatgcaaa
tcaaaacaagcctgaaattttagctcacaccagtcagaatggctcagata
aaaagctcaggtgacagcagatgctggagaggatgtggagaaaatgaaac
attcctccattgttggtgtgattgcaagctgatacaaccactctggaaat
cagcctggctgttcctcagaaaactgaacaaagtactagcaataacactc
ctgggaacatatccagaagactatcccacatgtaataaggacacccgttc
cactatgttcatagcaaccttatttataataaccagaagctggaaagagc
ccagatgtccttcagcagaggaatggatacaaaatatgtgatacatttac
acaatgcaatactgctcagttatcaaaaacaatgacttcatgaaattctt
aggcaaaggatagaactagataatatcatcctgaatgaggtaatccagtc
acaaaagaacatgcattatatgcactcactgactagtggatattagccca
aaactctcagaatacccaagatacgatttatagaccacatgaagattaag
aagaaacacctaattgtggggtgcttctatgcttctttagaagagggaac
aaaatactcatgggggggtggagata

gaattcttatattaatttgaatataaattaatttgttataatttgttcat
gatctccactgtaaatgggtagatgtttatagctgtaaagtagcatgctt
cagtgttcacttaacaaaggataaacatgataatcaatattaataatcaa
attgactgaatctacagattggattctgggcatatctataaagaattatg
tctataattttaattgagaaggctagtcctacacagtagggtattcccta
tccttggctggtgacgtagagcattcaagtggagaggaggaactgaacag
cattatgaagttcatgcataatgaactttggctgttttgcatcttcaggt
atgagtcagaacaagtcttgccacccttatgttgtcttcattgggatatt
ctgtgacagaaagagagaaataaaataagatgcctgatggtgttagattc
aattttatgtttgggaagtttatttcccttggttttcaacaatatttcat
ttctgtttcagcttgaacaaatcctgtttgacaacaatattttctcagca
gtctatctataactattgaactctgcattcagaaatttgttcttgtgttg
ctttgtttttgtaacagggatttgtttattccaggctttctttgaacttg
ctatgctcctaaagatgactttgaacttcacattccccgtctttactttt
ccagtcctgggattatcggcatattccactctgactggtttattttttta
tgggatcctgggggtattcccaggaacattttgtatatgagacaatgtgt
ttaacaactaggctatacctttagcccattagcttgtctcacaatataat
cattatttctggaaacatacatgaccttaggagcatttcagttaactttt
catttgtctgctgtatagagtcaagccagatttcatgggtgctaaacaga
ttgttctacggctgaggtcctttgctgacccatctttacttcttccatta
tctggtttaatatcactctctgtgtttttaaccatttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_77717430_77718474
seq2: B6Ng01-022A02.g_64_1101 (reverse)

seq1  AAAATGGTATAAAAACACAGAGAGGTGATAATTAAAACAGATAATTGAAG  50
      |||||||| |||||||||||||| ||||| |||||| |||||||| ||||
seq2  AAAATGGT-TAAAAACACAGAGA-GTGAT-ATTAAACCAGATAATGGAAG  47

seq1  AAGTAAAAGATGGGTCAGCAAAGGACCTCAGCAGTAGAACAATCTGCTTA  100
      |||| ||||||||||||||||||||||||||| ||||||||||||| |||
seq2  AAGT-AAAGATGGGTCAGCAAAGGACCTCAGCCGTAGAACAATCTGTTTA  96

seq1  GCACACATGAAATCTTGGCTTTGACTCTATTACAGCAGACAAATGAAAAG  150
      |||| ||||||||| |||| ||||||||| ||||||||||||||||||||
seq2  GCACCCATGAAATC-TGGC-TTGACTCTA-TACAGCAGACAAATGAAAAG  143

seq1  TTAACTGAAATGCTCCTAAGGTCATGTATGTTTCCAGAAATAATGATTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACTGAAATGCTCCTAAGGTCATGTATGTTTCCAGAAATAATGATTAT  193

seq1  ATTGTTGAGACAAGCTAATGGGCTAAAGGTATAGCCTAGTTGTTAAACAC  250
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTG-TGAGACAAGCTAATGGGCTAAAGGTATAGCCTAGTTGTTAAACAC  242

seq1  ATTGTCTCATATACAAAATGTTCCTGGGAATACCCCCAGGATCCCAT-AA  299
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  ATTGTCTCATATACAAAATGTTCCTGGGAATACCCCCAGGATCCCATAAA  292

seq1  AAAATAAACCAGTCAGAGTGGAATATGCCGATAATCCCAGGACTGGAAAA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAAACCAGTCAGAGTGGAATATGCCGATAATCCCAGGACTGGAAAA  342

seq1  GTAAAGACGGGGAATGTGAAGTTCAAAGTCATCTTTAGGAGCATAGCAAG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAGACGGGGAATGTGAAGTTCAAAGTCATCTTTAGGAGCATAGCAAG  392

seq1  TTCAAAGAAAGCCTGGAATAAACAAATCCCTGTTACAAAAACAAAGCAAC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAAGAAAGCCTGGAATAAACAAATCCCTGTTACAAAAACAAAGCAAC  442

seq1  ACAAGAACAAATTTCTGAATGCAGAGTTCAATAGTTATAGATAGACTGCT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGAACAAATTTCTGAATGCAGAGTTCAATAGTTATAGATAGACTGCT  492

seq1  GAGAAAATATTGTTGTCAAACAGGATTTGTTCAAGCTGAAACAGAAATGA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAAATATTGTTGTCAAACAGGATTTGTTCAAGCTGAAACAGAAATGA  542

seq1  AATATTGTTGAAAACCAAGGGAAATAAACTTCCCAAACATAAAATTGAAT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTGTTGAAAACCAAGGGAAATAAACTTCCCAAACATAAAATTGAAT  592

seq1  CTAACACCATCAGGCATCTTATTTTATTTCTCTCTTTCTGTCACAGAATA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACACCATCAGGCATCTTATTTTATTTCTCTCTTTCTGTCACAGAATA  642

seq1  TCCCAATGAAGACAACATAAGGGTGGCAAGACTTGTTCTGACTCATACCT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAATGAAGACAACATAAGGGTGGCAAGACTTGTTCTGACTCATACCT  692

seq1  GAAGATGCAAAACAGCCAAAGTTCATTATGCATGAACTTCATAATGCTGT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGATGCAAAACAGCCAAAGTTCATTATGCATGAACTTCATAATGCTGT  742

seq1  TCAGTTCCTCCTCTCCACTTGAATGCTCTACGTCACCAGCCAAGGATAGG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTTCCTCCTCTCCACTTGAATGCTCTACGTCACCAGCCAAGGATAGG  792

seq1  GAATACCCTACTGTGTAGGACTAGCCTTCTCAATTAAAATTATAGACATA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATACCCTACTGTGTAGGACTAGCCTTCTCAATTAAAATTATAGACATA  842

seq1  ATTCTTTATAGATATGCCCAGAATCCAATCTGTAGATTCAGTCAATTTGA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTTTATAGATATGCCCAGAATCCAATCTGTAGATTCAGTCAATTTGA  892

seq1  TTATTAATATTGATTATCATGTTTATCCTTTGTTAAGTGAACACTGAAGC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTAATATTGATTATCATGTTTATCCTTTGTTAAGTGAACACTGAAGC  942

seq1  ATGCTACTTTACAGCTATAAACATCTACCCATTTACAGTGGAGATCATGA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTACTTTACAGCTATAAACATCTACCCATTTACAGTGGAGATCATGA  992

seq1  ACAAATTATAACAAATTAATTTATATTCAAATTAATATAAGAATTC  1045
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAATTATAACAAATTAATTTATATTCAAATTAATATAAGAATTC  1038


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