BAC Information

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BAC

Clone NameB6Ng01-022L07
Chromosome3 (Build37)
Map Location 12,854,755 - 12,855,878
singlet/doubletsinglet
Overlap geneEG668033
Upstream geneEG621965, LOC100039798
Downstream geneLOC668037, LOC100039823, LOC100039861, 0710005M24Rik, LOC100041679, LOC100041667, LOC100039882
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-022L07.bB6Ng01-022L07.g
ACCDH854838DH854839
length1,2541,109
definitionDH854838|Mus musculus domesticus DNA, BAC clone: B6Ng01-022L07, 5' end.DH854839|Mus musculus domesticus DNA, BAC clone: B6Ng01-022L07, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcagtaagaatgttgcctattcagtgacattcagaattgcctctag
tattgtaagagagagagtgaaagaaatcaggcattactatctactacaaa
gagttagaaatctcagggcaagcttagcaaagtaagtttagaattcttat
tatagttatgtatggcagactacattacttattagtagaaattcccacac
acaatcacttagaataatagccgagttactcccataagcaagaatttaca
atgatgtaggaagaaggaaggttgtggtctaagaaggaactagagtaaat
acttagttaaatagctgagttacacccatacacaggaatttacaatggcc
tagggggaaggttggactatacaatagactagaattagaactatggcaag
ggcgtgaagtccttgcccctggcttctaagattaagctgaccttaggtag
ggctgcttttgatcccagttgttaacattgattttatcccagctggttct
tattagctttttgtatgcattcctctgttttgtttaaagccacgtataag
actggtgctcactttgagagaaattacattcagatacagcatactccctt
gtgtccgagtctgtcacccttttcgatgccaactccttgccaacctgacc
ggaaccctgatttctcccgtgtattgagggcaggccgactgaggctggtc
cgcggcaattacaccattatctgagtgactgcctctgagcacatgattaa
caactctttaacctctttctcttcattacattccgtacattgggtcaaga
tgcaaccaaaaactctagaatgactttttcctgaagatgtgaactttccc
tatttgcatcattaatatatcatcatctaacaaataacagatactatgac
agaagaaaggcctagaagaatagaggtaggggaatctgtgttagaatgta
ttgtatggaagaaagaaaggaataagatactagaaaaaattaatcttctc
taaagtagcgatagaaactggtgctagacaaaatgttagcaatagtttct
tactattcaacattaaacttaccccatatctgatgatggtgtcctacacc
tttcttgatttttctagattctgccaccaaattaattctgttgcaactct
gtgcgaatctgagctgacgtatactaaccagtgcatttacctaacgtttg
cgtagtctagagtagatcgatgtgaaagtagctgtttttctgaagaacag
acag
gaattctttataagatttaacggatgcatgtgtagtctaccaagcaccct
gactcttttgcttgtatttctacaatgccaagatgtgtcccatatgtatc
agaagatgctggcagcttgaaatattgctcaaaattgaaataatataagt
tcagtggcactttattgtctaaaaactcaatgaaagtttgagttagaaac
agagagtgctatatttttagagaaatgatactaccctgctgaaagataga
tttatcattattttgttgtcattattcagggtatcggagatgggcattcc
aagatttgtatgaatttggttttgccttagcaatattgttcctgaaaaca
atacacagagacttgtagtaatccaacccatgcttgtttggaacctttct
ttctcaaggaaacaagctatatcaaggactaccccaccaattttattaca
tgactatgattgaagtagatttcttcttgcttctttgaatgcatcaggag
gttccatattctcattaaataagtaagagcctataatatgaaggtttata
ctgtggtttaggtaaccaagatatactaatataaactacaggatatgaaa
gatgatatgtattgtgaaagatatctatgatggagataaaacatttatcc
agattgtaatgttagattcatcttgagataactgagcaaagatgttgagt
ttccaagactgtttctataatcctgttggaaatgtaactgtttgtgacct
acacctatgttatttaggcgttttagatattttataatgctcagaaggaa
ttaccatagattagtaaatcaaatttctgtttggtctgtttactaatatt
tctaaaatatcagtgcctgttgccagcccatttagaaacaaagtcatatg
gtatacacatttgctgtaggtaatatataataagcagaactaacaggttc
agtatcacacactctctggacagactcaggaagtcttgtccactattgtg
ggattctatataaaagaaaatgggattcttcctgtacttggctgcctcgt
ggtcaggaagtctggaagggagactagtgcctagtattggcagacctgaa
atttcttgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_12854755_12855878
seq2: B6Ng01-022L07.g_66_1174

seq1  GAATTCTTTATAAGATTTAACGGATGCATGTGTAGTCTACCAAGCACCCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTATAAGATTTAACGGATGCATGTGTAGTCTACCAAGCACCCT  50

seq1  GACTCTTTTGCTTGTATTTCTACAATGCCAAGATGTGTCCCATATGTATC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCTTTTGCTTGTATTTCTACAATGCCAAGATGTGTCCCATATGTATC  100

seq1  AGAAGATGCTGGCAGCTTGAAATATTGCTCAAAATTGAAATAATATAAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGATGCTGGCAGCTTGAAATATTGCTCAAAATTGAAATAATATAAGT  150

seq1  TCAGTGGCACTTTATTGTCTAAAAACTCAATGAAAGTTTGAGTTAGAAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTGGCACTTTATTGTCTAAAAACTCAATGAAAGTTTGAGTTAGAAAC  200

seq1  AGAGAGTGCTATATTTTTAGAGAAATGATACTACCCTGCTGAAAGATAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGTGCTATATTTTTAGAGAAATGATACTACCCTGCTGAAAGATAGA  250

seq1  TTTATCATTATTTTGTTGTCATTATTCAGGGTATCGGAGATGGGCATTCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATCATTATTTTGTTGTCATTATTCAGGGTATCGGAGATGGGCATTCC  300

seq1  AAGATTTGTATGAATTTGGTTTTGCCTTAGCAATATTGTTCCTGAAAACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATTTGTATGAATTTGGTTTTGCCTTAGCAATATTGTTCCTGAAAACA  350

seq1  ATACACAGAGACTTGTAGTAATCCAACCCATGCTTGTTTGGAACCTTTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACACAGAGACTTGTAGTAATCCAACCCATGCTTGTTTGGAACCTTTCT  400

seq1  TTCTCAAGGAAACAAGCTATATCAAGGACTACCCCACCAATTTTATTACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCAAGGAAACAAGCTATATCAAGGACTACCCCACCAATTTTATTACA  450

seq1  TGACTATGATTGAAGTAGATTTCTTCTTGCTTCTTTGAATGCATCAGGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTATGATTGAAGTAGATTTCTTCTTGCTTCTTTGAATGCATCAGGAG  500

seq1  GTTCCATATTCTCATTAAATAAGTAAGAGCCTATAATATGAAGGTTTATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCATATTCTCATTAAATAAGTAAGAGCCTATAATATGAAGGTTTATA  550

seq1  CTGTGGTTTAGGTAACCAAGATATACTAATATAAACTACAGGATATGAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGGTTTAGGTAACCAAGATATACTAATATAAACTACAGGATATGAAA  600

seq1  GATGATATGTATTGTGAAAGATATCTATGATGGAGATAAAACATTTATCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGATATGTATTGTGAAAGATATCTATGATGGAGATAAAACATTTATCC  650

seq1  AGATTGTAATGTTAGATTCATCTTGAGATAACTGAGCAAAGATGTTGAGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTGTAATGTTAGATTCATCTTGAGATAACTGAGCAAAGATGTTGAGT  700

seq1  TTCCAAGACTGTTTCTATAATCCTGTTGGAAATGTAACTGTTTGTGACCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAAGACTGTTTCTATAATCCTGTTGGAAATGTAACTGTTTGTGACCT  750

seq1  ACACCTATGTTATTTAGGCGTTTTAGATATTTTATAATGCTCAGAAGGAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCTATGTTATTTAGGCGTTTTAGATATTTTATAATGCTCAGAAGGAA  800

seq1  TTACCATAGATTAGTAAATCAAATTTCTGTTTGGTCTGTTTACTAATATT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCATAGATTAGTAAATCAAATTTCTGTTTGGTCTGTTTACTAATATT  850

seq1  TCTAAAATATCAGTGCCTGTTGCCAGCCCATTTTAGAAAACAAAGTCATA  900
      |||||||||||||||||||||||||||||| ||||| |||||||||||||
seq2  TCTAAAATATCAGTGCCTGTTGCCAGCCCA-TTTAG-AAACAAAGTCATA  898

seq1  TGGTATACACATTTGCTGTAGGTAATAATATAATAAGCAGAACTAACAGG  950
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  TGGTATACACATTTGCTGTAGGTAAT-ATATAATAAGCAGAACTAACAGG  947

seq1  TTCAGTATCACACAACTCCTCTGGAACAGAACTCAGGAAAGTCTTGTTCC  1000
      ||||||||||||| ||| |||||| |||| ||||||| |||||||||  |
seq2  TTCAGTATCACAC-ACT-CTCTGG-ACAG-ACTCAGG-AAGTCTTGT--C  990

seq1  CACTATTGTGGGAATCTATATAAAAGAAAAATGGGATTCTCCCTGTACCT  1050
      ||||||||||||| |||||||||||| ||||||||||||| |||||| ||
seq2  CACTATTGTGGGATTCTATATAAAAG-AAAATGGGATTCTTCCTGTA-CT  1038

seq1  TGGCTGCCTCGTGGTCAGGAAGTCCTGGAGGGAGACTAGTGCCTAGTATT  1100
      ||||||||||||||||||||||||  | ||||||||||||||||||||||
seq2  TGGCTGCCTCGTGGTCAGGAAGTCTGGAAGGGAGACTAGTGCCTAGTATT  1088

seq1  TGCAGAACCTGAAAATTTCCTTGT  1124
       |||| ||||||||  || |||||
seq2  GGCAG-ACCTGAAA--TTTCTTGT  1109