BAC Information

Click to search

BAC

Clone NameB6Ng01-022P18
Chromosome3 (Build37)
Map Location 76,286,968 - 76,287,775
singlet/doubletsinglet
Overlap geneFstl5
Upstream genePdcd10, Serpini1, Golph4
Downstream geneLOC100041625, LOC100041635
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-022P18.bB6Ng01-022P18.g
ACCDH855033DH855034
length963983
definitionDH855033|Mus musculus domesticus DNA, BAC clone: B6Ng01-022P18, 5' end.DH855034|Mus musculus domesticus DNA, BAC clone: B6Ng01-022P18, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcattcccagcctgtaatgacactaaggacaagtgtgatggagggt
atatatatatttctgtacctttggtatttctaacatattaattatttttt
ccctttcccaatatattaattcttaagaaagaaaggctttaaatgatagt
gtgtcgtgcacttgtcaatacatctcagatacttagggtatgcattctac
aaagaaagtgtgtttgtatgtttctgatgaaatgaacttgcaatagggga
tgattgtatggaaatgagatgcagccttatttcaaattattgatctttat
cctttttgaatgtttattttattttatttatttttgcttttgataatttc
atacgtattaaggcatcttaatcttatgcacccctcaattcttctctaca
aacactagcaacccccacaactgctattcagcttcatgtccttgtttatt
gttctacacacacacacacacacacacacacacacacacacacacatcct
gaagaatttagtgctgcctataggcacatgagtcttcagctaaccatcag
aaaacagcagtctattaggtgccatatccctaacaccccacagactcttt
ttcccttcagccattattgaaagcctgtagcttctcaatgatctctggat
tattctgagtccttgccctgtccatatgtttgggtcattttcaggtcttg
atcaggtagccacagccattgaaagtccataggtataccattttgtcatt
tgtagatgtgattatttccaagcagtttttccatgtccctggcttttgtg
gacatcctcttctaaaattatttacttaaaccgtagggtgaatgagtgca
atatatattcccaactctctagtcagcttattttctgcagttgacctgtc
attggtctacattcttaaacagtgttgcaaaaaaggagcttcaataacca
aaatggagaggaa
gaattcatgagtctgactcaggagaaaataatagtcatcagaggcagatg
gagagaagtgggtaccagagaaggtgaggaggggaacagagaatcaatag
gagagcagggaggagagggttaggagagagaatggaaatcagctgggagt
ggccactctaggaagcagctagaggtctggaacaggagtggttaggggta
tacaggggtgaccctagctgagattccttccagggagggatagagagatc
aaactggtcatatcccataaccagaaaggacttctagaggagggaggggg
acatcaatccaccacaaaactgtcaactcaaaatttgtcttgcctacagg
atatgcagcacggaacagagactgaaggagcagccatccaatgactgccc
caacttgagacccatcccatgtgagagaatcaacccctgacactattaat
gatattacgctatgcttgcagacaagaatctagcataactgtcttctgag
agacttcatcttgtagcatatggagacagatgaagagactcatagccaaa
catcaggcagagtgtaaggagtcttgttgaagactgggggatagaagtgg
gcatttctgcgtggttaaggactccacaagaagacccacagagtcaacta
actttgggactatagtggcgcacagaacctggccaccaaccagggagcat
gcagcagctggaactagatctcctacacatttgtagcaatgtgtgcaaat
tagtctttatttgggtcccctaagaagtagaccaggggctgtcttagtct
gctttccctccctctggatcacctaccctaacatggacagctgtttgggc
ctcaggataatgaggatgtgcctagtctgttggggactagatgtccaaac
cctaagggtgttggggaggcgttcctctcctctatgagaagagaaggtac
tagttcatgggaatatatttcatggtccgatcg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_76286968_76287775
seq2: B6Ng01-022P18.b_47_855

seq1  GAATTCATTCCCAGCCTGTAATGACACTAAGGACAAGTGTGATGGAGGGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTCCCAGCCTGTAATGACACTAAGGACAAGTGTGATGGAGGGT  50

seq1  ATATATATATTTCTGTACCTTTGGTATTTCTAACATATTAATTATTTTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATATATTTCTGTACCTTTGGTATTTCTAACATATTAATTATTTTTT  100

seq1  CCCTTTCCCAATATATTAATTCTTAAGAAAGAAAGGCTTTAAATGATAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTTCCCAATATATTAATTCTTAAGAAAGAAAGGCTTTAAATGATAGT  150

seq1  GTGTCGTGCACTTGTCAATACATCTCAGATACTTAGGGTATGCATTCTAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCGTGCACTTGTCAATACATCTCAGATACTTAGGGTATGCATTCTAC  200

seq1  AAAGAAAGTGTGTTTGTATGTTTCTGATGAAATGAACTTGCAATAGGGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAAGTGTGTTTGTATGTTTCTGATGAAATGAACTTGCAATAGGGGA  250

seq1  TGATTGTATGGAAATGAGATGCAGCCTTATTTCAAATTATTGATCTTTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTGTATGGAAATGAGATGCAGCCTTATTTCAAATTATTGATCTTTAT  300

seq1  CCTTTTTGAATGTTTATTTTATTTTATTTATTTTTGCTTTTGATAATTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTTTGAATGTTTATTTTATTTTATTTATTTTTGCTTTTGATAATTTC  350

seq1  ATACGTATTAAGGCATCTTAATCTTATGCACCCCTCAATTCTTCTCTACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACGTATTAAGGCATCTTAATCTTATGCACCCCTCAATTCTTCTCTACA  400

seq1  AACACTAGCAACCCCCACAACTGCTATTCAGCTTCATGTCCTTGTTTATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACTAGCAACCCCCACAACTGCTATTCAGCTTCATGTCCTTGTTTATT  450

seq1  GTTCTACACACACACACACACACACACACACACACACACACACACATCCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTACACACACACACACACACACACACACACACACACACACACATCCT  500

seq1  GAAGAATTTAGTGCTGCCTATAGGCACATGAGTCTTCAGCTAACCATCAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAATTTAGTGCTGCCTATAGGCACATGAGTCTTCAGCTAACCATCAG  550

seq1  AAAACAGCAGTCTATTAGGTGCCATATCCCTAACACCCCACAGACTCTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAGCAGTCTATTAGGTGCCATATCCCTAACACCCCACAGACTCTTT  600

seq1  TTCCCTTCAGCCATTATTGAAAGCCTGTAGCTTCTCAATGATCTCTGGAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCTTCAGCCATTATTGAAAGCCTGTAGCTTCTCAATGATCTCTGGAT  650

seq1  TATTCTGAGTCCTTGCCCTGTCCATATGTTTGGGTCATTTTCAGGTCTTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCTGAGTCCTTGCCCTGTCCATATGTTTGGGTCATTTTCAGGTCTTG  700

seq1  ATCAGGTAGCCACAGCCATTGAAAGTCCATAGGTATACCATTTTGTCATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGGTAGCCACAGCCATTGAAAGTCCATAGGTATACCATTTTGTCATT  750

seq1  TGTAGATGTGATTATTTCCAAGCAG-TTTTCCATGTCCCTGGCTTTTGTG  799
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  TGTAGATGTGATTATTTCCAAGCAGTTTTTCCATGTCCCTGGCTTTTGTG  800

seq1  GACATCCTC  808
      |||||||||
seq2  GACATCCTC  809