BAC Information

Click to search

BAC

Clone NameB6Ng01-022P23
Chromosome3 (Build37)
Map Location 13,629,965 - 13,631,057
singlet/doubletsinglet
Overlap gene0710005M24Rik
Upstream geneLOC100039798, EG668033, LOC668037, LOC100039823, LOC100039861, LOC100041679
Downstream geneLOC100041667, LOC100039882, EG622229, LOC668062, Slc7a12, LOC668068, Lrrcc1, E2f5, 1810022K09Rik, LOC100039929
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-022P23.bB6Ng01-022P23.g
ACCDH855043DH855044
length1,1651,080
definitionDH855043|Mus musculus domesticus DNA, BAC clone: B6Ng01-022P23, 5' end.DH855044|Mus musculus domesticus DNA, BAC clone: B6Ng01-022P23, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggctgagaagcacctgacaaaaat
gttcaacatccttaatcatcagggaaatgcaaattaaaacaacactgaaa
ttccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacag
cagatgctggtgaggatgtggagaaagaggaacactcctccattgttgct
ggtattgcaagcttgtacaaccactctggaaatcagtctggaggtttctc
aaataattggacataatactacaggaggatcccgcaatacctctcctggg
catatattcagaagatgtcccaaccagtaagaaggacacatgctccacta
tgttcatagcagccttatttataatagccagaagctggaaagaacccaga
tgcccctcaacagagtaatggatacagaaaatgtggtacattacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctaggcaa
atggatggacctggagtccatcctgagtgaggtaactcaatcacaaaaga
actcacatgatatgtactcatcgataagtggatattagcccagaaactta
gaatacccaagatataagatacaatttgctaaacacatgaagctcgggaa
gaacaaagaccaaggtgtggacagtttgccccttcttagatttgggaaca
aaacacccatggaaggagttacagagacaaattgtggagttgtgacgaaa
ggatggaccatctagaggccgccatatcccgggatccatcccatagtcag
cctcaaaacgctgacaccattgcatacactagcaaagattttgctgaaag
gacctttattgtagctgtctcttgtgagactattgcaggggcctagcaaa
cacagaagtggatgctcacagtcagctgttggatggatcacagggcccca
ttgggaggagctggaggaagttacctagggagctggggggatcttgcaac
cttatagttggaacaacaatatgaactaactagtaacaccccccttccct
cagcccccctccctggagctttgtgtctctggttcatgtatcaaagtggg
actgtgtcgccatcatgaaaagaaggccattggtacatgacaaactttga
atccctcggatgaac
ttctcctcttttaaaaatttttttctcaatgatgagcattctgactgtaa
tgacaggagatctaaaggtagttttaatatcaatccacttgtggctgtaa
attttgaacccttctaatatttacaggacctttgtacttcttttcctttt
ttattctttttttaaatactgtctattcaatacattaggtcatttatgga
taataagatatattttatgagtatttttttcaattttatatattctgaat
agtaatcgtctgtttgaattgcaacaagcaaagattttctcctgttcttg
gttttcttgttttggctttctcctgtttctcctttttcctgttcttggct
ttctcctgttcttgattttctgtttagtcggttgatagtatgcttcgtac
tgcagaagctttttaattatctgttaaaccatttgtgtaggatttttttt
ttgttattgggattctgttcagaaagttcttgattgtcctatctcatagt
attttttgtagctgtttcagtagcgatgtgagaattataggaaaatgtaa
gaaacatctataaagaagaggtgaacaactataaaactgtatattcactt
ggtgtctttccctctcagttttctcatctgctgtatttagaacagaatag
gtccttatatgttatagaattgtagtcatgaaggtatgatcgcatacaca
agaacagtactagtaacaagactgagccttaccacataaatggaatagga
acacaggcagatataaacatacgcaaatgtgaatacacacacaggcatac
acagacacatacagacacacacacacacacacacacacacgcacacctgt
aaagaaaccctgcacattcagctgatgcactctataggatactggtcttt
acttgggtaatcattaaacaaaataacaaagggacaaacagttaagcttt
gtacaaaacagaccaagcaattgtcttgaattctattttctgagatattt
taatatcacataaaaaataaacatgacctaaaacctcagtactaaagaat
gagtgcctgaattctgaaaagcactgaagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_13629965_13631057
seq2: B6Ng01-022P23.g_75_1154

seq1  TTCTCCTCTTTTAAAAATTTTTTTCTCAATGATGAGCATTCTGACTGTAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCCTCTTTTAAAAATTTTTTTCTCAATGATGAGCATTCTGACTGTAA  50

seq1  TGACAGGAGATCTAAAGGTAGTTTTAATATCAATCCACTTGTGGCTGTAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAGGAGATCTAAAGGTAGTTTTAATATCAATCCACTTGTGGCTGTAA  100

seq1  ATTTTGAACCCTTCTAATATTTACAGGACCTTTGTACTTCTTTTCCTTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGAACCCTTCTAATATTTACAGGACCTTTGTACTTCTTTTCCTTTT  150

seq1  TTATTCTTTTTTTAAATACTGTCTATTCAATACATTAGGTCATTTATGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTCTTTTTTTAAATACTGTCTATTCAATACATTAGGTCATTTATGGA  200

seq1  TAATAAGATATATTTTATGAGTATTTTTTTCAATTTTATATATTCTGAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAAGATATATTTTATGAGTATTTTTTTCAATTTTATATATTCTGAAT  250

seq1  AGTAATCGTCTGTTTGAATTGCAACAAGCAAAGATTTTCTCCTGTTCTTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAATCGTCTGTTTGAATTGCAACAAGCAAAGATTTTCTCCTGTTCTTG  300

seq1  GTTTTCTTGTTTTGGCTTTCTCCTGTTTCTCCTTTTTCCTGTTCTTGGCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTCTTGTTTTGGCTTTCTCCTGTTTCTCCTTTTTCCTGTTCTTGGCT  350

seq1  TTCTCCTGTTCTTGATTTTCTGTTTAGTCGGTTGATAGTATGCTTCGTAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCCTGTTCTTGATTTTCTGTTTAGTCGGTTGATAGTATGCTTCGTAC  400

seq1  TGCAGAAGCTTTTTAATTATCTGTTAAACCATTTGTGTAGGATTTTTTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGAAGCTTTTTAATTATCTGTTAAACCATTTGTGTAGGATTTTTTTT  450

seq1  TTGTTATTGGGATTCTGTTCAGAAAGTTCTTGATTGTCCTATCTCATAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTATTGGGATTCTGTTCAGAAAGTTCTTGATTGTCCTATCTCATAGT  500

seq1  ATTTTTTGTAGCTGTTTCAGTAGCGATGTGAGAATTATAGGAAAATGTAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTTGTAGCTGTTTCAGTAGCGATGTGAGAATTATAGGAAAATGTAA  550

seq1  GAAACATCTATAAAGAAGAGGTGAACAACTATAAAACTGTATATTCACTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACATCTATAAAGAAGAGGTGAACAACTATAAAACTGTATATTCACTT  600

seq1  GGTGTCTTTCCCTCTCAGTTTTCTCATCTGCTGTATTTAGAACAGAATAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTCTTTCCCTCTCAGTTTTCTCATCTGCTGTATTTAGAACAGAATAG  650

seq1  GTCCTTATATGTTATAGAATTGTAGTCATGAAGGTATGATCGCATACACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTTATATGTTATAGAATTGTAGTCATGAAGGTATGATCGCATACACA  700

seq1  AGAACAGTACTAGTAACAAGACTGAGCCTTACCACATAAATGGAATAGGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACAGTACTAGTAACAAGACTGAGCCTTACCACATAAATGGAATAGGA  750

seq1  ACACAGGCAGATATAAACATACGCAAATGTGAATACACACACAGGCATAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGGCAGATATAAACATACGCAAATGTGAATACACACACAGGCATAC  800

seq1  ACAGACACATACAGACACACACACACACACACACACACACGCACACCTGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGACACATACAGACACACACACACACACACACACACACGCACACCTGT  850

seq1  AAAGAAACCCTGCACATTCAGCTGATGCACTCTATAGGATACTGGTCTTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAACCCTGCACATTCAGCTGATGCACTCTATAGGATACTGGTCTTT  900

seq1  ACTTGGGTAATCATTAAACAAAATAACAAAGGGACAAACAGGTAAGCTTT  950
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  ACTTGGGTAATCATTAAACAAAATAACAAAGGGACAAACAGTTAAGCTTT  950

seq1  GTACAAAACAGGACCAAGCAATTGTCTTTGAATTCTATTTTCTGAGATAA  1000
      |||||||||| ||||||||||||||| |||||||||||||||||||||| 
seq2  GTACAAAACA-GACCAAGCAATTGTC-TTGAATTCTATTTTCTGAGATA-  997

seq1  ATATTTAATACATCACATAAAAAAATTAAACATGACCTAAAAACTTCAGT  1050
         ||||||  |||||||||||||  |||||||||||| ||||| |||||
seq2  --TTTTAAT--ATCACATAAAAAA--TAAACATGACCT-AAAACCTCAGT  1040

seq1  ACTAAAAGAAATGAGTGCCTGATATCTGAGAAGTCACTGAAGT  1093
      ||||||   |||||||||||||  ||||| ||| |||||||||
seq2  ACTAAA--GAATGAGTGCCTGAATTCTGAAAAG-CACTGAAGT  1080